RNA–Protein interactions for RNA: ENST00000562212.5

SCAMP5-203, Transcript of secretory carrier membrane protein 5, humanhuman

TSL 1 (best) BASIC

Gene SCAMP5, Length 3,400 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP5-203ENST00000562212 NISCHQ9Y2I1 1504 aa24.79■■□□□ 1.56
SCAMP5-203ENST00000562212 SHROOM4Q9ULL8 1493 aa22.43■■□□□ 1.18
SCAMP5-203ENST00000562212 DCAF8L2P0C7V8 631 aa22.37■■□□□ 1.17
SCAMP5-203ENST00000562212 SUPT5HO00267 1087 aaKnown RBP22.05■■□□□ 1.12
SCAMP5-203ENST00000562212 EHMT2Q96KQ7 1210 aa20.9■□□□□ 0.94
SCAMP5-203ENST00000562212 ZCCHC6Q5VYS8 1495 aaKnown RBP20.8■□□□□ 0.92
SCAMP5-203ENST00000562212 CHIC1Q5VXU3 224 aa20.74■□□□□ 0.91
SCAMP5-203ENST00000562212 LOC105371045A0A1W2PR82 267 aa20.61■□□□□ 0.89
SCAMP5-203ENST00000562212 FAM9AQ8IZU1 332 aaPredicted RBP20.6■□□□□ 0.89
SCAMP5-203ENST00000562212 PCGF6Q9BYE7 350 aa20.55■□□□□ 0.88
SCAMP5-203ENST00000562212 CCDC180Q9P1Z9 1646 aa20.52■□□□□ 0.88
SCAMP5-203ENST00000562212 MYO15BQ96JP2 1530 aa20.42■□□□□ 0.86
SCAMP5-203ENST00000562212 ABCC9O60706 1549 aa20.4■□□□□ 0.86
SCAMP5-203ENST00000562212 TRIM41Q8WV44 630 aa20.2■□□□□ 0.82
SCAMP5-203ENST00000562212 SCRIBQ14160 1630 aa20.17■□□□□ 0.82
SCAMP5-203ENST00000562212 PPARGC1BQ86YN6 1023 aaKnown RBP20.16■□□□□ 0.82
SCAMP5-203ENST00000562212 TTBK1Q5TCY1 1321 aaPredicted RBP20.09■□□□□ 0.81
SCAMP5-203ENST00000562212 HRCP23327 699 aa19.92■□□□□ 0.78
SCAMP5-203ENST00000562212 PABPN1Q86U42 306 aaKnown RBP eCLIP19.92■□□□□ 0.781e-6■■■■□ 24.5
SCAMP5-203ENST00000562212 RSF1Q96T23 1441 aaPredicted RBP19.82■□□□□ 0.76
SCAMP5-203ENST00000562212 CECR2Q9BXF3 1484 aa19.77■□□□□ 0.75
SCAMP5-203ENST00000562212 DCAF1Q9Y4B6 1507 aa19.75■□□□□ 0.75
SCAMP5-203ENST00000562212 RANGAP1P46060 587 aaPredicted RBP19.73■□□□□ 0.75
SCAMP5-203ENST00000562212 TRIM26Q12899 539 aaPredicted RBP19.65■□□□□ 0.74
SCAMP5-203ENST00000562212 RB1CC1Q8TDY2 1594 aa19.59■□□□□ 0.73
SCAMP5-203ENST00000562212 MROH2BQ7Z745 1585 aa19.5■□□□□ 0.71
SCAMP5-203ENST00000562212 UBTFP17480 764 aaKnown RBP19.48■□□□□ 0.71
SCAMP5-203ENST00000562212 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.39■□□□□ 0.7
SCAMP5-203ENST00000562212 WIZO95785 1651 aa19.36■□□□□ 0.69
SCAMP5-203ENST00000562212 NACADO15069 1562 aa19.32■□□□□ 0.68
SCAMP5-203ENST00000562212 CCER1Q8TC90 406 aaPredicted RBP19.3■□□□□ 0.68
SCAMP5-203ENST00000562212 ABCC8Q09428 1581 aa19.17■□□□□ 0.66
SCAMP5-203ENST00000562212 HNRNPUL2Q1KMD3 747 aaKnown RBP19.11■□□□□ 0.65
SCAMP5-203ENST00000562212 SOGA1O94964 1423 aa19.06■□□□□ 0.64
SCAMP5-203ENST00000562212 CCDC88BA6NC98 1476 aa19.06■□□□□ 0.64
SCAMP5-203ENST00000562212 CSRNP3Q8WYN3 585 aa19.06■□□□□ 0.64
SCAMP5-203ENST00000562212 ZEB1P37275 1124 aaPredicted RBP19.01■□□□□ 0.63
SCAMP5-203ENST00000562212 BAZ1AQ9NRL2 1556 aaPredicted RBP19.01■□□□□ 0.63
SCAMP5-203ENST00000562212 APLP2Q06481 763 aa18.99■□□□□ 0.63
SCAMP5-203ENST00000562212 RUSC2Q8N2Y8 1516 aa18.97■□□□□ 0.63
SCAMP5-203ENST00000562212 ITGAEP38570 1179 aa18.88■□□□□ 0.61
SCAMP5-203ENST00000562212 ATP1B4Q9UN42 357 aaPredicted RBP18.88■□□□□ 0.61
SCAMP5-203ENST00000562212 SMARCA4P51532 1647 aa18.83■□□□□ 0.6
SCAMP5-203ENST00000562212 CEP162Q5TB80 1403 aa18.82■□□□□ 0.6
SCAMP5-203ENST00000562212 YTHDC1Q96MU7 727 aaKnown RBP18.81■□□□□ 0.6
SCAMP5-203ENST00000562212 TOP2AP11388 1531 aaKnown RBP18.77■□□□□ 0.59
SCAMP5-203ENST00000562212 WRNQ14191 1432 aaPredicted RBP eCLIP18.76■□□□□ 0.59
SCAMP5-203ENST00000562212 SMARCA2P51531 1590 aa18.74■□□□□ 0.59
SCAMP5-203ENST00000562212 P3H3Q8IVL6 736 aa18.69■□□□□ 0.58
SCAMP5-203ENST00000562212 BAZ1BQ9UIG0 1483 aaKnown RBP18.68■□□□□ 0.58
SCAMP5-203ENST00000562212 DIEXFQ68CQ4 756 aaKnown RBP18.67■□□□□ 0.58
SCAMP5-203ENST00000562212 UNC13AQ9UPW8 1703 aa18.65■□□□□ 0.58
SCAMP5-203ENST00000562212 TNIKQ9UKE5 1360 aa18.6■□□□□ 0.57
SCAMP5-203ENST00000562212 BICRAQ9NZM4 1560 aa18.59■□□□□ 0.57
SCAMP5-203ENST00000562212 ATAD2BQ9ULI0 1458 aa18.58■□□□□ 0.56
SCAMP5-203ENST00000562212 CLIP1P30622 1438 aa18.56■□□□□ 0.56
SCAMP5-203ENST00000562212 GOLGA3Q08378 1498 aa18.53■□□□□ 0.56
SCAMP5-203ENST00000562212 SCAF1Q9H7N4 1312 aaKnown RBP18.49■□□□□ 0.55
SCAMP5-203ENST00000562212 RAPGEF2Q9Y4G8 1499 aa18.48■□□□□ 0.55
SCAMP5-203ENST00000562212 KANK4Q5T7N3 995 aaPredicted RBP18.45■□□□□ 0.54
SCAMP5-203ENST00000562212 SYNJ1O43426 1573 aa18.44■□□□□ 0.54
SCAMP5-203ENST00000562212 NEUROD1Q13562 356 aa18.43■□□□□ 0.54
SCAMP5-203ENST00000562212 EIF4G1Q04637 1599 aaKnown RBP18.41■□□□□ 0.54
SCAMP5-203ENST00000562212 ARID3CA6NKF2 412 aa18.4■□□□□ 0.54
SCAMP5-203ENST00000562212 FAM50AQ14320 339 aaKnown RBP18.39■□□□□ 0.54
SCAMP5-203ENST00000562212 CEP164Q9UPV0 1460 aa18.38■□□□□ 0.53
SCAMP5-203ENST00000562212 EEA1Q15075 1411 aa18.38■□□□□ 0.53
SCAMP5-203ENST00000562212 ZNF316A6NFI3 1004 aaPredicted RBP18.38■□□□□ 0.53
SCAMP5-203ENST00000562212 GTF3C3Q9Y5Q9 886 aa18.35■□□□□ 0.53
SCAMP5-203ENST00000562212 CENPBP07199 599 aaPredicted RBP18.31■□□□□ 0.52
SCAMP5-203ENST00000562212 MIER1Q8N108 512 aa18.3■□□□□ 0.52
SCAMP5-203ENST00000562212 ACIN1Q9UKV3 1341 aaKnown RBP18.26■□□□□ 0.51
SCAMP5-203ENST00000562212 DNAJC5BQ9UF47 199 aa18.25■□□□□ 0.51
SCAMP5-203ENST00000562212 VPS8Q8N3P4 1428 aa18.23■□□□□ 0.51
SCAMP5-203ENST00000562212 HIRIP3Q9BW71 556 aaPredicted RBP18.22■□□□□ 0.51
SCAMP5-203ENST00000562212 CUX2O14529 1486 aa18.19■□□□□ 0.5
SCAMP5-203ENST00000562212 KIF27Q86VH2 1401 aa18.18■□□□□ 0.5
SCAMP5-203ENST00000562212 KIF21BO75037 1637 aa18.09■□□□□ 0.49
SCAMP5-203ENST00000562212 SIN3AQ96ST3 1273 aa18.09■□□□□ 0.49
SCAMP5-203ENST00000562212 CUX1P39880 1505 aa18.08■□□□□ 0.48
SCAMP5-203ENST00000562212 CARMIL1Q5VZK9 1371 aa18.07■□□□□ 0.48
SCAMP5-203ENST00000562212 CNGB1Q14028 1251 aaPredicted RBP18.06■□□□□ 0.48
SCAMP5-203ENST00000562212 NCAPD3P42695 1498 aa18.05■□□□□ 0.48
SCAMP5-203ENST00000562212 ARAP1Q96P48 1450 aa18.05■□□□□ 0.48
SCAMP5-203ENST00000562212 PEG3Q9GZU2 1588 aa18.03■□□□□ 0.48
SCAMP5-203ENST00000562212 CADPSQ9ULU8 1353 aa18.03■□□□□ 0.48
SCAMP5-203ENST00000562212 TDRD9Q8NDG6 1382 aaKnown RBP18.02■□□□□ 0.48
SCAMP5-203ENST00000562212 CHIC2Q9UKJ5 165 aa18.02■□□□□ 0.48
SCAMP5-203ENST00000562212 NESP48681 1621 aa18.01■□□□□ 0.47
SCAMP5-203ENST00000562212 IGF1RP08069 1367 aa18.01■□□□□ 0.47
SCAMP5-203ENST00000562212 RAD54L2Q9Y4B4 1467 aa18■□□□□ 0.47
SCAMP5-203ENST00000562212 FBLN2P98095 1184 aa18■□□□□ 0.47
SCAMP5-203ENST00000562212 TOP2BQ02880 1626 aa17.98■□□□□ 0.47
SCAMP5-203ENST00000562212 DDX10Q13206 875 aaKnown RBP17.95■□□□□ 0.46
SCAMP5-203ENST00000562212 CFTRP13569 1480 aa17.94■□□□□ 0.46
SCAMP5-203ENST00000562212 CCNB3Q8WWL7 1395 aa17.94■□□□□ 0.46
SCAMP5-203ENST00000562212 FGD5Q6ZNL6 1462 aa17.93■□□□□ 0.46
SCAMP5-203ENST00000562212 PRXQ9BXM0 1461 aa17.93■□□□□ 0.46
SCAMP5-203ENST00000562212 FHOD3Q2V2M9 1422 aa17.93■□□□□ 0.46
SCAMP5-203ENST00000562212 TRIM52Q96A61 297 aa17.91■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 91 ms