RNA–Protein interactions for RNA: ENST00000560527.1

USP8-211, Transcript of ubiquitin specific peptidase 8, humanhuman

TSL 4

Gene USP8, Length 535 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-211ENST00000560527 LHX6Q9UPM6 363 aa8.51□□□□□ -1.05
USP8-211ENST00000560527 AXIN2Q9Y2T1 843 aa8.51□□□□□ -1.05
USP8-211ENST00000560527 PHF14O94880 888 aa8.5□□□□□ -1.05
USP8-211ENST00000560527 BARGINQ6ZT62 677 aa8.5□□□□□ -1.05
USP8-211ENST00000560527 DDX12PQ92771 950 aa8.5□□□□□ -1.05
USP8-211ENST00000560527 STAC3Q96MF2 364 aa8.5□□□□□ -1.05
USP8-211ENST00000560527 EPAS1Q99814 870 aa8.5□□□□□ -1.05
USP8-211ENST00000560527 ARHGAP33O14559 1287 aa8.48□□□□□ -1.05
USP8-211ENST00000560527 ADGRD1Q6QNK2 874 aa8.47□□□□□ -1.05
USP8-211ENST00000560527 JPH4Q96JJ6 628 aa8.47□□□□□ -1.05
USP8-211ENST00000560527 GPR37O15354 613 aa8.46□□□□□ -1.06
USP8-211ENST00000560527 FBXW7Q969H0 707 aa8.46□□□□□ -1.06
USP8-211ENST00000560527 EN1Q05925 392 aaPredicted RBP8.45□□□□□ -1.06
USP8-211ENST00000560527 NUTM2FA1L443 756 aa8.44□□□□□ -1.06
USP8-211ENST00000560527 TK2O00142 265 aa8.44□□□□□ -1.06
USP8-211ENST00000560527 TYW1BQ6NUM6 668 aa8.44□□□□□ -1.06
USP8-211ENST00000560527 PCDHGA10Q9Y5H3 936 aa8.44□□□□□ -1.06
USP8-211ENST00000560527 FCHSD2O94868 740 aa8.43□□□□□ -1.06
USP8-211ENST00000560527 FOSBP53539 338 aa8.43□□□□□ -1.06
USP8-211ENST00000560527 HIC1Q14526 733 aa8.43□□□□□ -1.06
USP8-211ENST00000560527 POTEEQ6S8J3 1075 aa8.43□□□□□ -1.06
USP8-211ENST00000560527 PRIM1P49642 420 aaKnown RBP8.42□□□□□ -1.06
USP8-211ENST00000560527 KCNH8Q96L42 1107 aa8.42□□□□□ -1.06
USP8-211ENST00000560527 SLC24A3Q9HC58 644 aa8.42□□□□□ -1.06
USP8-211ENST00000560527 GNPATO15228 680 aa8.4□□□□□ -1.06
USP8-211ENST00000560527 PTGDRQ13258 359 aa8.4□□□□□ -1.06
USP8-211ENST00000560527 AK7Q96M32 723 aa8.4□□□□□ -1.06
USP8-211ENST00000560527 MINK1Q8N4C8 1332 aaPredicted RBP8.39□□□□□ -1.07
USP8-211ENST00000560527 MAP3K7O43318 606 aa8.39□□□□□ -1.07
USP8-211ENST00000560527 KRI1Q8N9T8 703 aaKnown RBP8.39□□□□□ -1.07
USP8-211ENST00000560527 ZDHHC16Q969W1 377 aa8.39□□□□□ -1.07
USP8-211ENST00000560527 MAP2K5Q13163 448 aa8.38□□□□□ -1.07
USP8-211ENST00000560527 PPP4R3BQ5MIZ7 849 aa8.38□□□□□ -1.07
USP8-211ENST00000560527 ZNF454Q8N9F8 522 aa8.38□□□□□ -1.07
USP8-211ENST00000560527 CERKQ8TCT0 537 aa8.38□□□□□ -1.07
USP8-211ENST00000560527 KCTD12Q96CX2 325 aaKnown RBP8.38□□□□□ -1.07
USP8-211ENST00000560527 RGS20O76081 388 aa8.36□□□□□ -1.07
USP8-211ENST00000560527 NPDC1Q9NQX5 325 aaPredicted RBP8.36□□□□□ -1.07
USP8-211ENST00000560527 IRF6O14896 467 aa8.35□□□□□ -1.07
USP8-211ENST00000560527 HRO43593 1189 aa8.35□□□□□ -1.07
USP8-211ENST00000560527 C6orf132Q5T0Z8 1188 aa8.35□□□□□ -1.07
USP8-211ENST00000560527 RBM33Q96EV2 1170 aaKnown RBP8.35□□□□□ -1.07
USP8-211ENST00000560527 PSEN2P49810 448 aa8.34□□□□□ -1.07
USP8-211ENST00000560527 BRPF1P55201 1214 aaPredicted RBP8.34□□□□□ -1.07
USP8-211ENST00000560527 TSR1Q2NL82 804 aaKnown RBP8.34□□□□□ -1.07
USP8-211ENST00000560527 DMRTA1Q5VZB9 504 aa8.34□□□□□ -1.07
USP8-211ENST00000560527 CDHR5Q9HBB8 845 aa8.34□□□□□ -1.07
USP8-211ENST00000560527 TRIM66O15016 1216 aa8.33□□□□□ -1.08
USP8-211ENST00000560527 ADAM33Q9BZ11 813 aa8.33□□□□□ -1.08
USP8-211ENST00000560527 BCL2L12Q9HB09 334 aa8.33□□□□□ -1.08
USP8-211ENST00000560527 RBM27Q9P2N5 1060 aaKnown RBP8.33□□□□□ -1.08
USP8-211ENST00000560527 FECHP22830 423 aa8.31□□□□□ -1.08
USP8-211ENST00000560527 CCDC102AQ96A19 550 aa8.31□□□□□ -1.08
USP8-211ENST00000560527 PTPN5P54829 565 aa8.3□□□□□ -1.08
USP8-211ENST00000560527 NEUROD2Q15784 382 aa8.3□□□□□ -1.08
USP8-211ENST00000560527 IRX2Q9BZI1 471 aaPredicted RBP8.3□□□□□ -1.08
USP8-211ENST00000560527 AMHR2Q16671 573 aa8.29□□□□□ -1.08
USP8-211ENST00000560527 TMEM132AQ24JP5 1023 aa8.29□□□□□ -1.08
USP8-211ENST00000560527 KCNK17Q96T54 332 aa8.29□□□□□ -1.08
USP8-211ENST00000560527 DAXXQ9UER7 740 aaPredicted RBP8.29□□□□□ -1.08
USP8-211ENST00000560527 GOLGA8CPA6NN73 597 aa8.28□□□□□ -1.08
USP8-211ENST00000560527 PTPREP23469 700 aa8.28□□□□□ -1.08
USP8-211ENST00000560527 PDE4DQ08499 809 aa8.28□□□□□ -1.08
USP8-211ENST00000560527 TTC13Q8NBP0 860 aa8.28□□□□□ -1.08
USP8-211ENST00000560527 PPP1R3GB7ZBB8 358 aa8.27□□□□□ -1.09
USP8-211ENST00000560527 IFFO2Q5TF58 517 aa8.27□□□□□ -1.09
USP8-211ENST00000560527 PRSS12P56730 875 aa8.26□□□□□ -1.09
USP8-211ENST00000560527 OATP04181 439 aa8.25□□□□□ -1.09
USP8-211ENST00000560527 VPS9D1Q9Y2B5 631 aa8.25□□□□□ -1.09
USP8-211ENST00000560527 PADI6Q6TGC4 694 aa8.24□□□□□ -1.09
USP8-211ENST00000560527 CDCA7LQ96GN5 454 aa8.24□□□□□ -1.09
USP8-211ENST00000560527 ONECUT3O60422 494 aaPredicted RBP8.23□□□□□ -1.09
USP8-211ENST00000560527 COL9A1P20849 921 aa8.23□□□□□ -1.09
USP8-211ENST00000560527 KDM4CQ9H3R0 1056 aa8.22□□□□□ -1.09
USP8-211ENST00000560527 ADGRG1Q9Y653 693 aa8.22□□□□□ -1.09
USP8-211ENST00000560527 METTL3Q86U44 580 aaKnown RBP8.21□□□□□ -1.1
USP8-211ENST00000560527 SLC4A5Q9BY07 1137 aa8.21□□□□□ -1.1
USP8-211ENST00000560527 A0A0G2JS52 829 aa8.2□□□□□ -1.1
USP8-211ENST00000560527 PARP9Q8IXQ6 854 aa8.2□□□□□ -1.1
USP8-211ENST00000560527 MRPL50Q8N5N7 158 aaKnown RBP8.2□□□□□ -1.1
USP8-211ENST00000560527 RBM46Q8TBY0 533 aaKnown RBP8.2□□□□□ -1.1
USP8-211ENST00000560527 PXYLP1Q8TE99 480 aa8.2□□□□□ -1.1
USP8-211ENST00000560527 WNT2BQ93097 391 aa8.2□□□□□ -1.1
USP8-211ENST00000560527 GPBP1L1Q9HC44 474 aaPredicted RBP8.2□□□□□ -1.1
USP8-211ENST00000560527 TRIM6-TRIM34B2RNG4 842 aa8.19□□□□□ -1.1
USP8-211ENST00000560527 CLCN1P35523 988 aa8.19□□□□□ -1.1
USP8-211ENST00000560527 THSD4Q6ZMP0 1018 aa8.19□□□□□ -1.1
USP8-211ENST00000560527 TTLL12Q14166 644 aaPredicted RBP8.18□□□□□ -1.1
USP8-211ENST00000560527 PACS2Q86VP3 889 aa8.18□□□□□ -1.1
USP8-211ENST00000560527 TMUB1Q9BVT8 246 aa8.18□□□□□ -1.1
USP8-211ENST00000560527 TSKSQ9UJT2 592 aa8.18□□□□□ -1.1
USP8-211ENST00000560527 PHOX2BQ99453 314 aa8.17□□□□□ -1.1
USP8-211ENST00000560527 GPCPD1Q9NPB8 672 aa8.17□□□□□ -1.1
USP8-211ENST00000560527 FAM198AQ9UFP1 575 aa8.17□□□□□ -1.1
USP8-211ENST00000560527 NBPF26B4DH59 902 aa8.16□□□□□ -1.1
USP8-211ENST00000560527 DDRGK1Q96HY6 314 aa8.16□□□□□ -1.1
USP8-211ENST00000560527 ZBED2Q9BTP6 218 aa8.16□□□□□ -1.1
USP8-211ENST00000560527 NBPF3Q9H094 633 aa8.16□□□□□ -1.1
USP8-211ENST00000560527 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.15□□□□□ -1.1
USP8-211ENST00000560527 GIGYF2Q6Y7W6 1299 aaKnown RBP8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms