RNA–Protein interactions for RNA: ENST00000560357.5

HMBOX1-214, Transcript of homeobox containing 1, humanhuman

TSL 2

Gene HMBOX1, Length 979 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMBOX1-214ENST00000560357 KIF15Q9NS87 1388 aa10.74□□□□□ -0.69
HMBOX1-214ENST00000560357 INO80Q9ULG1 1556 aaPredicted RBP10.73□□□□□ -0.69
HMBOX1-214ENST00000560357 DHX57Q6P158 1386 aaKnown RBP10.73□□□□□ -0.69
HMBOX1-214ENST00000560357 ANKRD50Q9ULJ7 1429 aa10.73□□□□□ -0.69
HMBOX1-214ENST00000560357 ZFYVE16Q7Z3T8 1539 aa10.73□□□□□ -0.69
HMBOX1-214ENST00000560357 KDM5CP41229 1560 aa10.73□□□□□ -0.69
HMBOX1-214ENST00000560357 RAPGEF3O95398 923 aa10.72□□□□□ -0.69
HMBOX1-214ENST00000560357 ACIN1Q9UKV3 1341 aaKnown RBP10.72□□□□□ -0.69
HMBOX1-214ENST00000560357 ATP7AQ04656 1500 aa10.72□□□□□ -0.69
HMBOX1-214ENST00000560357 RICTORQ6R327 1708 aa10.72□□□□□ -0.69
HMBOX1-214ENST00000560357 MYCNP04198 464 aaPredicted RBP10.71□□□□□ -0.69
HMBOX1-214ENST00000560357 TRHP20396 242 aaPredicted RBP10.71□□□□□ -0.69
HMBOX1-214ENST00000560357 MLH3Q9UHC1 1453 aa10.71□□□□□ -0.69
HMBOX1-214ENST00000560357 KIDINS220Q9ULH0 1771 aa10.71□□□□□ -0.69
HMBOX1-214ENST00000560357 DUOX2Q9NRD8 1548 aa10.7□□□□□ -0.7
HMBOX1-214ENST00000560357 FRMPD1Q5SYB0 1578 aa10.69□□□□□ -0.7
HMBOX1-214ENST00000560357 HECW2Q9P2P5 1572 aa10.69□□□□□ -0.7
HMBOX1-214ENST00000560357 COL17A1Q9UMD9 1497 aaPredicted RBP10.68□□□□□ -0.7
HMBOX1-214ENST00000560357 TRIM52Q96A61 297 aa10.68□□□□□ -0.7
HMBOX1-214ENST00000560357 MYT1LQ9UL68 1186 aa10.68□□□□□ -0.7
HMBOX1-214ENST00000560357 ERBINQ96RT1 1412 aa10.67□□□□□ -0.7
HMBOX1-214ENST00000560357 ZMYM4Q5VZL5 1548 aa10.67□□□□□ -0.7
HMBOX1-214ENST00000560357 DHX29Q7Z478 1369 aaKnown RBP10.66□□□□□ -0.7
HMBOX1-214ENST00000560357 CLSPNQ9HAW4 1339 aa10.66□□□□□ -0.7
HMBOX1-214ENST00000560357 MPHOSPH9Q99550 1183 aa10.65□□□□□ -0.7
HMBOX1-214ENST00000560357 ABCA6Q8N139 1617 aa10.65□□□□□ -0.7
HMBOX1-214ENST00000560357 A2MP01023 1474 aa10.64□□□□□ -0.71
HMBOX1-214ENST00000560357 PZPP20742 1482 aa10.64□□□□□ -0.71
HMBOX1-214ENST00000560357 MAGI2Q86UL8 1455 aa10.64□□□□□ -0.71
HMBOX1-214ENST00000560357 ZEB1P37275 1124 aaPredicted RBP10.64□□□□□ -0.71
HMBOX1-214ENST00000560357 YEATS2Q9ULM3 1422 aa10.64□□□□□ -0.71
HMBOX1-214ENST00000560357 UNC13BO14795 1591 aa10.64□□□□□ -0.71
HMBOX1-214ENST00000560357 DIP2CQ9Y2E4 1556 aa10.64□□□□□ -0.71
HMBOX1-214ENST00000560357 NUP155O75694 1391 aa10.64□□□□□ -0.71
HMBOX1-214ENST00000560357 KDM5DQ9BY66 1539 aa10.63□□□□□ -0.71
HMBOX1-214ENST00000560357 FOXD4L1Q9NU39 408 aa10.63□□□□□ -0.71
HMBOX1-214ENST00000560357 EIF2AK4Q9P2K8 1649 aaKnown RBP10.62□□□□□ -0.71
HMBOX1-214ENST00000560357 KIF3BO15066 747 aa10.61□□□□□ -0.71
HMBOX1-214ENST00000560357 DEPDC5O75140 1603 aa10.61□□□□□ -0.71
HMBOX1-214ENST00000560357 BCORL1Q5H9F3 1711 aa10.6□□□□□ -0.71
HMBOX1-214ENST00000560357 ATP10AO60312 1499 aa10.6□□□□□ -0.71
HMBOX1-214ENST00000560357 FAM135AQ9P2D6 1515 aa10.59□□□□□ -0.71
HMBOX1-214ENST00000560357 IQGAP3Q86VI3 1631 aa10.59□□□□□ -0.71
HMBOX1-214ENST00000560357 PKD2Q13563 968 aa10.59□□□□□ -0.71
HMBOX1-214ENST00000560357 REREQ9P2R6 1566 aa10.58□□□□□ -0.72
HMBOX1-214ENST00000560357 MROH1Q8NDA8 1641 aa10.58□□□□□ -0.72
HMBOX1-214ENST00000560357 RNF17Q9BXT8 1623 aaKnown RBP10.58□□□□□ -0.72
HMBOX1-214ENST00000560357 VWDEQ8N2E2 1590 aa10.57□□□□□ -0.72
HMBOX1-214ENST00000560357 ANKRD30BQ9BXX2 1392 aa10.57□□□□□ -0.72
HMBOX1-214ENST00000560357 SIN3AQ96ST3 1273 aa10.57□□□□□ -0.72
HMBOX1-214ENST00000560357 PRDM15P57071 1507 aaPredicted RBP10.57□□□□□ -0.72
HMBOX1-214ENST00000560357 ARHGEF40Q8TER5 1519 aa10.57□□□□□ -0.72
HMBOX1-214ENST00000560357 KANK1Q14678 1352 aa10.56□□□□□ -0.72
HMBOX1-214ENST00000560357 ABCB7O75027 752 aa10.56□□□□□ -0.72
HMBOX1-214ENST00000560357 AGLP35573 1532 aa10.55□□□□□ -0.72
HMBOX1-214ENST00000560357 GGT6Q6P531 493 aa10.55□□□□□ -0.72
HMBOX1-214ENST00000560357 NEUROD1Q13562 356 aa10.54□□□□□ -0.72
HMBOX1-214ENST00000560357 SIGLEC1Q9BZZ2 1709 aa10.54□□□□□ -0.72
HMBOX1-214ENST00000560357 TET3O43151 1660 aa10.53□□□□□ -0.72
HMBOX1-214ENST00000560357 LMTK2Q8IWU2 1503 aa10.53□□□□□ -0.72
HMBOX1-214ENST00000560357 E9PCH4 1651 aa10.51□□□□□ -0.73
HMBOX1-214ENST00000560357 CEP152O94986 1710 aa10.51□□□□□ -0.73
HMBOX1-214ENST00000560357 TIMELESSQ9UNS1 1208 aa10.51□□□□□ -0.73
HMBOX1-214ENST00000560357 WASHC2CQ9Y4E1 1318 aa10.51□□□□□ -0.73
HMBOX1-214ENST00000560357 PLA2R1Q13018 1463 aa10.5□□□□□ -0.73
HMBOX1-214ENST00000560357 ABCC3O15438 1527 aa10.5□□□□□ -0.73
HMBOX1-214ENST00000560357 RPRD2Q5VT52 1461 aaKnown RBP10.49□□□□□ -0.73
HMBOX1-214ENST00000560357 PTPRTO14522 1441 aa10.49□□□□□ -0.73
HMBOX1-214ENST00000560357 EFCAB6Q5THR3 1501 aa10.48□□□□□ -0.73
HMBOX1-214ENST00000560357 ZC3H13Q5T200 1668 aaKnown RBP10.48□□□□□ -0.73
HMBOX1-214ENST00000560357 TONSLQ96HA7 1378 aa10.47□□□□□ -0.73
HMBOX1-214ENST00000560357 CAMSAP1Q5T5Y3 1602 aa10.47□□□□□ -0.73
HMBOX1-214ENST00000560357 MLECQ14165 292 aa10.46□□□□□ -0.73
HMBOX1-214ENST00000560357 POLA2Q14181 598 aa10.46□□□□□ -0.73
HMBOX1-214ENST00000560357 ARID4BQ4LE39 1312 aaPredicted RBP10.46□□□□□ -0.73
HMBOX1-214ENST00000560357 NPATQ14207 1427 aa10.46□□□□□ -0.74
HMBOX1-214ENST00000560357 ARHGAP31Q2M1Z3 1444 aa10.46□□□□□ -0.74
HMBOX1-214ENST00000560357 SPHKAPQ2M3C7 1700 aa10.46□□□□□ -0.74
HMBOX1-214ENST00000560357 CFAP65Q6ZU64 1925 aaKnown RBP10.45□□□□□ -0.74
HMBOX1-214ENST00000560357 TRPM2O94759 1503 aa10.45□□□□□ -0.74
HMBOX1-214ENST00000560357 CCDC144AA2RUR9 1427 aa10.45□□□□□ -0.74
HMBOX1-214ENST00000560357 ZBTB22O15209 634 aa10.45□□□□□ -0.74
HMBOX1-214ENST00000560357 PPP1R15AO75807 674 aaPredicted RBP10.45□□□□□ -0.74
HMBOX1-214ENST00000560357 L3MBTL2Q969R5 705 aa10.44□□□□□ -0.74
HMBOX1-214ENST00000560357 CLTCQ00610 1675 aaKnown RBP10.44□□□□□ -0.74
HMBOX1-214ENST00000560357 NOS1P29475 1434 aa10.42□□□□□ -0.74
HMBOX1-214ENST00000560357 CLTCL1P53675 1640 aa10.42□□□□□ -0.74
HMBOX1-214ENST00000560357 CNTLNQ9NXG0 1405 aa10.41□□□□□ -0.74
HMBOX1-214ENST00000560357 ATF5Q9Y2D1 282 aaPredicted RBP10.41□□□□□ -0.74
HMBOX1-214ENST00000560357 ZMYM3Q14202 1370 aa10.4□□□□□ -0.74
HMBOX1-214ENST00000560357 FBXO31Q5XUX0 539 aaPredicted RBP10.4□□□□□ -0.74
HMBOX1-214ENST00000560357 ESF1Q9H501 851 aaKnown RBP10.4□□□□□ -0.74
HMBOX1-214ENST00000560357 PREX1Q8TCU6 1659 aa10.4□□□□□ -0.74
HMBOX1-214ENST00000560357 SPATA31E1Q6ZUB1 1445 aa10.4□□□□□ -0.75
HMBOX1-214ENST00000560357 SYNMO15061 1565 aa10.39□□□□□ -0.75
HMBOX1-214ENST00000560357 UGGT1Q9NYU2 1555 aa10.39□□□□□ -0.75
HMBOX1-214ENST00000560357 MROH2AA6NES4 1674 aa10.38□□□□□ -0.75
HMBOX1-214ENST00000560357 ERVK-7P63135 1459 aa10.38□□□□□ -0.75
HMBOX1-214ENST00000560357 RGL3Q3MIN7 710 aa10.38□□□□□ -0.75
HMBOX1-214ENST00000560357 NEURL4Q96JN8 1562 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms