RNA–Protein interactions for RNA: ENST00000558545.1

COPS2-204, Transcript of COP9 signalosome subunit 2, humanhuman

TSL 2

Gene COPS2, Length 668 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS2-204ENST00000558545 ADGRD1Q6QNK2 874 aa12.71□□□□□ -0.37
COPS2-204ENST00000558545 VSIG10Q8N0Z9 540 aa12.7□□□□□ -0.38
COPS2-204ENST00000558545 KDM2AQ9Y2K7 1162 aa12.7□□□□□ -0.38
COPS2-204ENST00000558545 PPP1R3GB7ZBB8 358 aa12.68□□□□□ -0.38
COPS2-204ENST00000558545 NBR1Q14596 966 aa12.68□□□□□ -0.38
COPS2-204ENST00000558545 EN1Q05925 392 aaPredicted RBP12.67□□□□□ -0.38
COPS2-204ENST00000558545 ZBED2Q9BTP6 218 aa12.67□□□□□ -0.38
COPS2-204ENST00000558545 HRO43593 1189 aa12.66□□□□□ -0.38
COPS2-204ENST00000558545 VPS9D1Q9Y2B5 631 aa12.66□□□□□ -0.38
COPS2-204ENST00000558545 C6orf132Q5T0Z8 1188 aa12.65□□□□□ -0.38
COPS2-204ENST00000558545 MYT1LQ9UL68 1186 aa12.65□□□□□ -0.38
COPS2-204ENST00000558545 GRXCR2A6NFK2 248 aa12.63□□□□□ -0.39
COPS2-204ENST00000558545 OSBPP22059 807 aa12.63□□□□□ -0.39
COPS2-204ENST00000558545 COL9A1P20849 921 aa12.62□□□□□ -0.39
COPS2-204ENST00000558545 RBM33Q96EV2 1170 aaKnown RBP12.62□□□□□ -0.39
COPS2-204ENST00000558545 MAP3K7O43318 606 aa12.6□□□□□ -0.39
COPS2-204ENST00000558545 PRIM1P49642 420 aaKnown RBP12.6□□□□□ -0.39
COPS2-204ENST00000558545 RNF166Q96A37 237 aaPredicted RBP12.6□□□□□ -0.39
COPS2-204ENST00000558545 BHMG1C9JSJ3 638 aaPredicted RBP12.58□□□□□ -0.4
COPS2-204ENST00000558545 ONECUT3O60422 494 aaPredicted RBP12.58□□□□□ -0.4
COPS2-204ENST00000558545 TSR1Q2NL82 804 aaKnown RBP12.58□□□□□ -0.4
COPS2-204ENST00000558545 MLLT3P42568 568 aaPredicted RBP12.57□□□□□ -0.4
COPS2-204ENST00000558545 CERKQ8TCT0 537 aa12.55□□□□□ -0.4
COPS2-204ENST00000558545 RABGEF1Q9UJ41 708 aa12.54□□□□□ -0.4
COPS2-204ENST00000558545 SEMA3EO15041 775 aa12.53□□□□□ -0.4
COPS2-204ENST00000558545 PROX2Q3B8N5 592 aa12.53□□□□□ -0.4
COPS2-204ENST00000558545 TRIM6-TRIM34B2RNG4 842 aa12.51□□□□□ -0.41
COPS2-204ENST00000558545 STAC3Q96MF2 364 aa12.51□□□□□ -0.41
COPS2-204ENST00000558545 NBPF3Q9H094 633 aa12.51□□□□□ -0.41
COPS2-204ENST00000558545 TESPA1A2RU30 521 aaPredicted RBP12.5□□□□□ -0.41
COPS2-204ENST00000558545 CDHR5Q9HBB8 845 aa12.48□□□□□ -0.41
COPS2-204ENST00000558545 MRPL50Q8N5N7 158 aaKnown RBP12.47□□□□□ -0.41
COPS2-204ENST00000558545 KIAA1468Q9P260 1216 aa12.47□□□□□ -0.41
COPS2-204ENST00000558545 RBM27Q9P2N5 1060 aaKnown RBP12.47□□□□□ -0.41
COPS2-204ENST00000558545 PRSS12P56730 875 aa12.46□□□□□ -0.41
COPS2-204ENST00000558545 LAPTM4BQ86VI4 370 aa12.46□□□□□ -0.41
COPS2-204ENST00000558545 NPDC1Q9NQX5 325 aaPredicted RBP12.46□□□□□ -0.41
COPS2-204ENST00000558545 CDCA7LQ96GN5 454 aa12.45□□□□□ -0.42
COPS2-204ENST00000558545 TSKSQ9UJT2 592 aa12.45□□□□□ -0.42
COPS2-204ENST00000558545 SMYD5Q6GMV2 418 aa12.44□□□□□ -0.42
COPS2-204ENST00000558545 PACS2Q86VP3 889 aa12.42□□□□□ -0.42
COPS2-204ENST00000558545 TTC13Q8NBP0 860 aa12.41□□□□□ -0.42
COPS2-204ENST00000558545 KCTD12Q96CX2 325 aaKnown RBP12.4□□□□□ -0.42
COPS2-204ENST00000558545 HCSTQ9UBK5 93 aa12.4□□□□□ -0.42
COPS2-204ENST00000558545 FAM198AQ9UFP1 575 aa12.4□□□□□ -0.42
COPS2-204ENST00000558545 GOLGA8CPA6NN73 597 aa12.39□□□□□ -0.43
COPS2-204ENST00000558545 PTGDRQ13258 359 aa12.39□□□□□ -0.43
COPS2-204ENST00000558545 FAM98CQ17RN3 349 aaKnown RBP12.37□□□□□ -0.43
COPS2-204ENST00000558545 WNT2BQ93097 391 aa12.37□□□□□ -0.43
COPS2-204ENST00000558545 THSD4Q6ZMP0 1018 aa12.36□□□□□ -0.43
COPS2-204ENST00000558545 NBPF26B4DH59 902 aa12.35□□□□□ -0.43
COPS2-204ENST00000558545 SEPT9Q9UHD8 586 aaPredicted RBP12.35□□□□□ -0.43
COPS2-204ENST00000558545 NUTM2FA1L443 756 aa12.34□□□□□ -0.43
COPS2-204ENST00000558545 PADI6Q6TGC4 694 aa12.34□□□□□ -0.43
COPS2-204ENST00000558545 ZFRQ96KR1 1074 aaKnown RBP12.34□□□□□ -0.43
COPS2-204ENST00000558545 FCHSD2O94868 740 aa12.33□□□□□ -0.44
COPS2-204ENST00000558545 ANKK1Q8NFD2 765 aa12.33□□□□□ -0.44
COPS2-204ENST00000558545 TATDN2Q93075 761 aa12.33□□□□□ -0.44
COPS2-204ENST00000558545 RBM26Q5T8P6 1007 aaKnown RBP12.32□□□□□ -0.44
COPS2-204ENST00000558545 C3orf80F5H4A9 247 aa12.31□□□□□ -0.44
COPS2-204ENST00000558545 SOWAHBA6NEL2 793 aa12.3□□□□□ -0.44
COPS2-204ENST00000558545 PNMA3Q9UL41 463 aa12.3□□□□□ -0.44
COPS2-204ENST00000558545 NUDT18Q6ZVK8 323 aa12.29□□□□□ -0.44
COPS2-204ENST00000558545 SMAPO00193 183 aa12.27□□□□□ -0.45
COPS2-204ENST00000558545 GPR37O15354 613 aa12.27□□□□□ -0.45
COPS2-204ENST00000558545 HIC1Q14526 733 aa12.27□□□□□ -0.45
COPS2-204ENST00000558545 TULP1O00294 542 aaPredicted RBP12.26□□□□□ -0.45
COPS2-204ENST00000558545 PTPN5P54829 565 aa12.25□□□□□ -0.45
COPS2-204ENST00000558545 EYA1Q99502 592 aa12.25□□□□□ -0.45
COPS2-204ENST00000558545 BCAMP50895 628 aa12.24□□□□□ -0.45
COPS2-204ENST00000558545 LRCH3Q96II8 777 aa12.24□□□□□ -0.45
COPS2-204ENST00000558545 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.24□□□□□ -0.45
COPS2-204ENST00000558545 GPIHBP1Q8IV16 184 aa12.22□□□□□ -0.45
COPS2-204ENST00000558545 ADGRG1Q9Y653 693 aa12.22□□□□□ -0.45
COPS2-204ENST00000558545 GNPATO15228 680 aa12.21□□□□□ -0.45
COPS2-204ENST00000558545 NYAP1Q6ZVC0 841 aa12.21□□□□□ -0.45
COPS2-204ENST00000558545 SAMD7Q7Z3H4 446 aa12.2□□□□□ -0.46
COPS2-204ENST00000558545 RBM46Q8TBY0 533 aaKnown RBP12.19□□□□□ -0.46
COPS2-204ENST00000558545 TSR3Q9UJK0 312 aaKnown RBP12.19□□□□□ -0.46
COPS2-204ENST00000558545 HDGFP51858 240 aaKnown RBP12.16□□□□□ -0.46
COPS2-204ENST00000558545 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.16□□□□□ -0.46
COPS2-204ENST00000558545 WBP1LQ9NX94 342 aa12.16□□□□□ -0.46
COPS2-204ENST00000558545 HPS5Q9UPZ3 1129 aa12.16□□□□□ -0.46
COPS2-204ENST00000558545 SLC24A1O60721 1099 aa12.15□□□□□ -0.46
COPS2-204ENST00000558545 OATP04181 439 aa12.15□□□□□ -0.46
COPS2-204ENST00000558545 FECHP22830 423 aa12.14□□□□□ -0.47
COPS2-204ENST00000558545 DNAJB2P25686 324 aa12.14□□□□□ -0.47
COPS2-204ENST00000558545 PLA2G2EQ9NZK7 142 aa12.14□□□□□ -0.47
COPS2-204ENST00000558545 SWT1Q5T5J6 900 aaKnown RBP12.13□□□□□ -0.47
COPS2-204ENST00000558545 PXYLP1Q8TE99 480 aa12.13□□□□□ -0.47
COPS2-204ENST00000558545 PPP4CP60510 307 aa12.12□□□□□ -0.47
COPS2-204ENST00000558545 FAM161AQ3B820 660 aa12.12□□□□□ -0.47
COPS2-204ENST00000558545 TMEM134Q9H6X4 195 aa12.12□□□□□ -0.47
COPS2-204ENST00000558545 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.11□□□□□ -0.47
COPS2-204ENST00000558545 IFFO2Q5TF58 517 aa12.11□□□□□ -0.47
COPS2-204ENST00000558545 METTL3Q86U44 580 aaKnown RBP12.11□□□□□ -0.47
COPS2-204ENST00000558545 SLF2Q8IX21 1173 aa12.11□□□□□ -0.47
COPS2-204ENST00000558545 NECTIN2Q92692 538 aa12.11□□□□□ -0.47
COPS2-204ENST00000558545 RCCD1A6NED2 376 aa12.1□□□□□ -0.47
COPS2-204ENST00000558545 SLC4A3P48751 1232 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms