RNA–Protein interactions for RNA: ENST00000558357.5

INO80-205, Transcript of INO80 complex subunit, humanhuman

TSL 1 (best)

Gene INO80, Length 5,503 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
INO80-205ENST00000558357 PDE4CQ08493 712 aa14.02□□□□□ -0.17
INO80-205ENST00000558357 RAB3GAP2Q9H2M9 1393 aa14.01□□□□□ -0.17
INO80-205ENST00000558357 TOMM22Q9NS69 142 aa14.01□□□□□ -0.17
INO80-205ENST00000558357 CCDC146Q8IYE0 955 aa14.01□□□□□ -0.17
INO80-205ENST00000558357 ATP6V1DQ9Y5K8 247 aa14.01□□□□□ -0.17
INO80-205ENST00000558357 SKOR2Q2VWA4 1001 aaPredicted RBP14□□□□□ -0.17
INO80-205ENST00000558357 MARCH6O60337 910 aa14□□□□□ -0.17
INO80-205ENST00000558357 SETQ01105 290 aaPredicted RBP14□□□□□ -0.17
INO80-205ENST00000558357 TSR1Q2NL82 804 aaKnown RBP13.99□□□□□ -0.17
INO80-205ENST00000558357 CARMIL2Q6F5E8 1435 aa13.99□□□□□ -0.17
INO80-205ENST00000558357 H3BQV1 296 aa13.99□□□□□ -0.17
INO80-205ENST00000558357 TRHP20396 242 aaPredicted RBP13.99□□□□□ -0.17
INO80-205ENST00000558357 HSP90AA2PQ14568 343 aaPredicted RBP13.99□□□□□ -0.17
INO80-205ENST00000558357 IFFO2Q5TF58 517 aa13.99□□□□□ -0.17
INO80-205ENST00000558357 TPD52L1Q16890 204 aaPredicted RBP13.99□□□□□ -0.17
INO80-205ENST00000558357 RSPH6AQ9H0K4 717 aa13.98□□□□□ -0.17
INO80-205ENST00000558357 G3V3G9 751 aa13.98□□□□□ -0.17
INO80-205ENST00000558357 DCAF8Q5TAQ9 597 aa13.98□□□□□ -0.17
INO80-205ENST00000558357 FMN1Q68DA7 1419 aa13.98□□□□□ -0.17
INO80-205ENST00000558357 GOLGA6L19H0YKK7 550 aa13.98□□□□□ -0.17
INO80-205ENST00000558357 EFCAB2Q5VUJ9 269 aa13.98□□□□□ -0.17
INO80-205ENST00000558357 CENPQQ7L2Z9 268 aaPredicted RBP13.98□□□□□ -0.17
INO80-205ENST00000558357 FOXD4L5Q5VV16 416 aaPredicted RBP13.97□□□□□ -0.17
INO80-205ENST00000558357 FOXD4L4Q8WXT5 416 aaPredicted RBP13.97□□□□□ -0.17
INO80-205ENST00000558357 DDX49Q9Y6V7 483 aaKnown RBP13.97□□□□□ -0.17
INO80-205ENST00000558357 PES1O00541 588 aaKnown RBP13.97□□□□□ -0.17
INO80-205ENST00000558357 SOGA1O94964 1423 aa13.96□□□□□ -0.17
INO80-205ENST00000558357 TPM1P09493 284 aa13.96□□□□□ -0.17
INO80-205ENST00000558357 FAM184AQ8NB25 1140 aa13.96□□□□□ -0.17
INO80-205ENST00000558357 AMPHP49418 695 aa13.96□□□□□ -0.17
INO80-205ENST00000558357 FRAT2O75474 233 aaPredicted RBP13.96□□□□□ -0.17
INO80-205ENST00000558357 GPS2Q13227 327 aa13.96□□□□□ -0.17
INO80-205ENST00000558357 FAM161AQ3B820 660 aa13.96□□□□□ -0.17
INO80-205ENST00000558357 BECN2A8MW95 431 aa13.96□□□□□ -0.18
INO80-205ENST00000558357 TPM2P07951 284 aa13.96□□□□□ -0.18
INO80-205ENST00000558357 KANK4Q5T7N3 995 aaPredicted RBP13.96□□□□□ -0.18
INO80-205ENST00000558357 KIF15Q9NS87 1388 aa13.95□□□□□ -0.18
INO80-205ENST00000558357 VPS53Q5VIR6 699 aa13.95□□□□□ -0.18
INO80-205ENST00000558357 CCDC70Q6NSX1 233 aa13.95□□□□□ -0.18
INO80-205ENST00000558357 BAZ1AQ9NRL2 1556 aaPredicted RBP13.95□□□□□ -0.18
INO80-205ENST00000558357 NGDNQ8NEJ9 315 aaKnown RBP13.95□□□□□ -0.18
INO80-205ENST00000558357 MYBBP1AQ9BQG0 1328 aaKnown RBP13.94□□□□□ -0.18
INO80-205ENST00000558357 RILPL2Q969X0 211 aa13.93□□□□□ -0.18
INO80-205ENST00000558357 CCDC9Q9Y3X0 531 aaKnown RBP13.93□□□□□ -0.18
INO80-205ENST00000558357 AKAP17AQ02040 695 aaKnown RBP13.93□□□□□ -0.18
INO80-205ENST00000558357 L3MBTL2Q969R5 705 aa13.93□□□□□ -0.18
INO80-205ENST00000558357 CCAR2Q8N163 923 aaKnown RBP13.92□□□□□ -0.18
INO80-205ENST00000558357 GSE1Q14687 1217 aa13.92□□□□□ -0.18
INO80-205ENST00000558357 GTF2E1P29083 439 aaPredicted RBP13.92□□□□□ -0.18
INO80-205ENST00000558357 EID1Q9Y6B2 187 aa13.92□□□□□ -0.18
INO80-205ENST00000558357 CECR2Q9BXF3 1484 aa13.92□□□□□ -0.18
INO80-205ENST00000558357 PDE4AP27815 886 aa13.92□□□□□ -0.18
INO80-205ENST00000558357 ANKRD45Q5TZF3 282 aa13.92□□□□□ -0.18
INO80-205ENST00000558357 KIF3BO15066 747 aa13.91□□□□□ -0.18
INO80-205ENST00000558357 ZKSCAN2Q63HK3 967 aa13.91□□□□□ -0.18
INO80-205ENST00000558357 LRRFIP1Q32MZ4 808 aaKnown RBP13.9□□□□□ -0.18
INO80-205ENST00000558357 SYNE3Q6ZMZ3 975 aa13.9□□□□□ -0.18
INO80-205ENST00000558357 E9PSI1 815 aa13.9□□□□□ -0.18
INO80-205ENST00000558357 CPLX2Q6PUV4 134 aaKnown RBP13.9□□□□□ -0.18
INO80-205ENST00000558357 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.89□□□□□ -0.19
INO80-205ENST00000558357 RSPH4AQ5TD94 716 aa13.89□□□□□ -0.19
INO80-205ENST00000558357 RUFY2Q8WXA3 655 aa13.89□□□□□ -0.19
INO80-205ENST00000558357 LTV1Q96GA3 475 aaPredicted RBP13.89□□□□□ -0.19
INO80-205ENST00000558357 DIAPH3Q9NSV4 1193 aa13.89□□□□□ -0.19
INO80-205ENST00000558357 CGNL1Q0VF96 1302 aa13.88□□□□□ -0.19
INO80-205ENST00000558357 IPO7O95373 1038 aaKnown RBP13.88□□□□□ -0.19
INO80-205ENST00000558357 RRP7AQ9Y3A4 280 aaKnown RBP13.88□□□□□ -0.19
INO80-205ENST00000558357 REC8O95072 547 aa13.87□□□□□ -0.19
INO80-205ENST00000558357 MCTP1Q6DN14 999 aa13.87□□□□□ -0.19
INO80-205ENST00000558357 RRP1P56182 461 aaKnown RBP13.86□□□□□ -0.19
INO80-205ENST00000558357 TRIM29Q14134 588 aa13.86□□□□□ -0.19
INO80-205ENST00000558357 ZKSCAN1P17029 563 aaPredicted RBP13.86□□□□□ -0.19
INO80-205ENST00000558357 ANKRD20A12PQ8NF67 263 aa13.86□□□□□ -0.19
INO80-205ENST00000558357 CCDC47Q96A33 483 aaKnown RBP13.86□□□□□ -0.19
INO80-205ENST00000558357 FOXD4L6Q3SYB3 417 aaPredicted RBP13.85□□□□□ -0.19
INO80-205ENST00000558357 FOXD4L3Q6VB84 417 aaPredicted RBP13.85□□□□□ -0.19
INO80-205ENST00000558357 WASHC2CQ9Y4E1 1318 aa13.85□□□□□ -0.19
INO80-205ENST00000558357 ZNF771Q7L3S4 317 aaPredicted RBP13.85□□□□□ -0.19
INO80-205ENST00000558357 ZNF592Q92610 1267 aa13.85□□□□□ -0.19
INO80-205ENST00000558357 PANK3Q9H999 370 aa13.85□□□□□ -0.19
INO80-205ENST00000558357 SLC4A3P48751 1232 aa13.84□□□□□ -0.19
INO80-205ENST00000558357 C1orf141Q5JVX7 400 aa13.84□□□□□ -0.19
INO80-205ENST00000558357 AMOTL1Q8IY63 956 aa13.84□□□□□ -0.19
INO80-205ENST00000558357 TEX35Q5T0J7 233 aa13.84□□□□□ -0.19
INO80-205ENST00000558357 BCL2L13Q9BXK5 485 aa13.84□□□□□ -0.19
INO80-205ENST00000558357 HOOK1Q9UJC3 728 aaKnown RBP13.84□□□□□ -0.19
INO80-205ENST00000558357 ELL2O00472 640 aaPredicted RBP13.84□□□□□ -0.19
INO80-205ENST00000558357 TRAK1Q9UPV9 953 aa13.84□□□□□ -0.19
INO80-205ENST00000558357 NUTM2DQ5VT03 806 aaPredicted RBP13.83□□□□□ -0.19
INO80-205ENST00000558357 PCMTD1Q96MG8 357 aaPredicted RBP13.83□□□□□ -0.19
INO80-205ENST00000558357 HNRNPMP52272 730 aaKnown RBP eCLIP13.83□□□□□ -0.2
INO80-205ENST00000558357 NEXNQ0ZGT2 675 aa13.83□□□□□ -0.2
INO80-205ENST00000558357 EXOC6Q8TAG9 804 aa13.83□□□□□ -0.2
INO80-205ENST00000558357 COG3Q96JB2 828 aa13.83□□□□□ -0.2
INO80-205ENST00000558357 CRBNQ96SW2 442 aa13.83□□□□□ -0.2
INO80-205ENST00000558357 DDX19BQ9UMR2 479 aa13.83□□□□□ -0.2
INO80-205ENST00000558357 ZBED9Q6R2W3 1325 aa13.82□□□□□ -0.2
INO80-205ENST00000558357 UACAQ9BZF9 1416 aa13.82□□□□□ -0.2
INO80-205ENST00000558357 PLIN1O60240 522 aa13.82□□□□□ -0.2
INO80-205ENST00000558357 NOL10Q9BSC4 688 aaKnown RBP13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms