RNA–Protein interactions for RNA: ENST00000558031.5

CRNDE-204, Transcript of colorectal neoplasia differentially expressed, humanhuman

TSL 2

Gene CRNDE, Length 464 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNDE-204ENST00000558031 GRXCR2A6NFK2 248 aa9.47□□□□□ -0.89
CRNDE-204ENST00000558031 ADGRD1Q6QNK2 874 aa9.46□□□□□ -0.9
CRNDE-204ENST00000558031 RBM33Q96EV2 1170 aaKnown RBP9.46□□□□□ -0.9
CRNDE-204ENST00000558031 TK2O00142 265 aa9.45□□□□□ -0.9
CRNDE-204ENST00000558031 VSIG10Q8N0Z9 540 aa9.45□□□□□ -0.9
CRNDE-204ENST00000558031 EN1Q05925 392 aaPredicted RBP9.43□□□□□ -0.9
CRNDE-204ENST00000558031 C6orf132Q5T0Z8 1188 aa9.43□□□□□ -0.9
CRNDE-204ENST00000558031 MAP3K7O43318 606 aa9.42□□□□□ -0.9
CRNDE-204ENST00000558031 ZBED2Q9BTP6 218 aa9.42□□□□□ -0.9
CRNDE-204ENST00000558031 MYT1LQ9UL68 1186 aa9.42□□□□□ -0.9
CRNDE-204ENST00000558031 PPP1R3GB7ZBB8 358 aa9.41□□□□□ -0.9
CRNDE-204ENST00000558031 COL9A1P20849 921 aa9.41□□□□□ -0.9
CRNDE-204ENST00000558031 SLC4A5Q9BY07 1137 aa9.41□□□□□ -0.9
CRNDE-204ENST00000558031 VPS9D1Q9Y2B5 631 aa9.41□□□□□ -0.9
CRNDE-204ENST00000558031 HRO43593 1189 aa9.4□□□□□ -0.9
CRNDE-204ENST00000558031 OSBPP22059 807 aa9.4□□□□□ -0.9
CRNDE-204ENST00000558031 MLLT3P42568 568 aaPredicted RBP9.4□□□□□ -0.9
CRNDE-204ENST00000558031 PRIM1P49642 420 aaKnown RBP9.4□□□□□ -0.9
CRNDE-204ENST00000558031 TSR1Q2NL82 804 aaKnown RBP9.4□□□□□ -0.9
CRNDE-204ENST00000558031 RNF166Q96A37 237 aaPredicted RBP9.39□□□□□ -0.91
CRNDE-204ENST00000558031 SEMA3EO15041 775 aa9.37□□□□□ -0.91
CRNDE-204ENST00000558031 PROX2Q3B8N5 592 aa9.37□□□□□ -0.91
CRNDE-204ENST00000558031 STAC3Q96MF2 364 aa9.36□□□□□ -0.91
CRNDE-204ENST00000558031 BHMG1C9JSJ3 638 aaPredicted RBP9.34□□□□□ -0.91
CRNDE-204ENST00000558031 CDHR5Q9HBB8 845 aa9.33□□□□□ -0.92
CRNDE-204ENST00000558031 RABGEF1Q9UJ41 708 aa9.32□□□□□ -0.92
CRNDE-204ENST00000558031 TRIM6-TRIM34B2RNG4 842 aa9.31□□□□□ -0.92
CRNDE-204ENST00000558031 CERKQ8TCT0 537 aa9.31□□□□□ -0.92
CRNDE-204ENST00000558031 NBPF3Q9H094 633 aa9.31□□□□□ -0.92
CRNDE-204ENST00000558031 TESPA1A2RU30 521 aaPredicted RBP9.3□□□□□ -0.92
CRNDE-204ENST00000558031 ONECUT3O60422 494 aaPredicted RBP9.3□□□□□ -0.92
CRNDE-204ENST00000558031 MRPL50Q8N5N7 158 aaKnown RBP9.3□□□□□ -0.92
CRNDE-204ENST00000558031 KIAA1468Q9P260 1216 aa9.3□□□□□ -0.92
CRNDE-204ENST00000558031 KCTD12Q96CX2 325 aaKnown RBP9.28□□□□□ -0.92
CRNDE-204ENST00000558031 CDCA7LQ96GN5 454 aa9.28□□□□□ -0.92
CRNDE-204ENST00000558031 PRSS12P56730 875 aa9.27□□□□□ -0.93
CRNDE-204ENST00000558031 NPDC1Q9NQX5 325 aaPredicted RBP9.27□□□□□ -0.93
CRNDE-204ENST00000558031 TSKSQ9UJT2 592 aa9.27□□□□□ -0.93
CRNDE-204ENST00000558031 GOLGA8CPA6NN73 597 aa9.26□□□□□ -0.93
CRNDE-204ENST00000558031 SMYD5Q6GMV2 418 aa9.26□□□□□ -0.93
CRNDE-204ENST00000558031 PACS2Q86VP3 889 aa9.25□□□□□ -0.93
CRNDE-204ENST00000558031 SEPT9Q9UHD8 586 aaPredicted RBP9.25□□□□□ -0.93
CRNDE-204ENST00000558031 NUTM2FA1L443 756 aa9.24□□□□□ -0.93
CRNDE-204ENST00000558031 FAM198AQ9UFP1 575 aa9.24□□□□□ -0.93
CRNDE-204ENST00000558031 PTGDRQ13258 359 aa9.23□□□□□ -0.93
CRNDE-204ENST00000558031 LAPTM4BQ86VI4 370 aa9.23□□□□□ -0.93
CRNDE-204ENST00000558031 RBM27Q9P2N5 1060 aaKnown RBP9.23□□□□□ -0.93
CRNDE-204ENST00000558031 RBM26Q5T8P6 1007 aaKnown RBP9.22□□□□□ -0.93
CRNDE-204ENST00000558031 PADI6Q6TGC4 694 aa9.22□□□□□ -0.93
CRNDE-204ENST00000558031 WNT2BQ93097 391 aa9.22□□□□□ -0.93
CRNDE-204ENST00000558031 HCSTQ9UBK5 93 aa9.21□□□□□ -0.94
CRNDE-204ENST00000558031 SMAPO00193 183 aa9.2□□□□□ -0.94
CRNDE-204ENST00000558031 FAM98CQ17RN3 349 aaKnown RBP9.2□□□□□ -0.94
CRNDE-204ENST00000558031 THSD4Q6ZMP0 1018 aa9.2□□□□□ -0.94
CRNDE-204ENST00000558031 TTC13Q8NBP0 860 aa9.2□□□□□ -0.94
CRNDE-204ENST00000558031 PNMA3Q9UL41 463 aa9.2□□□□□ -0.94
CRNDE-204ENST00000558031 NBPF26B4DH59 902 aa9.19□□□□□ -0.94
CRNDE-204ENST00000558031 C3orf80F5H4A9 247 aa9.19□□□□□ -0.94
CRNDE-204ENST00000558031 PTPN5P54829 565 aa9.19□□□□□ -0.94
CRNDE-204ENST00000558031 ANKK1Q8NFD2 765 aa9.19□□□□□ -0.94
CRNDE-204ENST00000558031 TATDN2Q93075 761 aa9.19□□□□□ -0.94
CRNDE-204ENST00000558031 ZFRQ96KR1 1074 aaKnown RBP9.19□□□□□ -0.94
CRNDE-204ENST00000558031 FCHSD2O94868 740 aa9.18□□□□□ -0.94
CRNDE-204ENST00000558031 NUDT18Q6ZVK8 323 aa9.18□□□□□ -0.94
CRNDE-204ENST00000558031 BCAMP50895 628 aa9.15□□□□□ -0.94
CRNDE-204ENST00000558031 SOWAHBA6NEL2 793 aa9.14□□□□□ -0.95
CRNDE-204ENST00000558031 TULP1O00294 542 aaPredicted RBP9.14□□□□□ -0.95
CRNDE-204ENST00000558031 LRCH3Q96II8 777 aa9.13□□□□□ -0.95
CRNDE-204ENST00000558031 HIC1Q14526 733 aa9.12□□□□□ -0.95
CRNDE-204ENST00000558031 GPIHBP1Q8IV16 184 aa9.12□□□□□ -0.95
CRNDE-204ENST00000558031 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.12□□□□□ -0.95
CRNDE-204ENST00000558031 GPR37O15354 613 aa9.11□□□□□ -0.95
CRNDE-204ENST00000558031 SAMD7Q7Z3H4 446 aa9.11□□□□□ -0.95
CRNDE-204ENST00000558031 EYA1Q99502 592 aa9.11□□□□□ -0.95
CRNDE-204ENST00000558031 GNPATO15228 680 aa9.1□□□□□ -0.95
CRNDE-204ENST00000558031 FAM161AQ3B820 660 aa9.1□□□□□ -0.95
CRNDE-204ENST00000558031 ADGRG1Q9Y653 693 aa9.1□□□□□ -0.95
CRNDE-204ENST00000558031 SLC24A1O60721 1099 aa9.09□□□□□ -0.95
CRNDE-204ENST00000558031 FECHP22830 423 aa9.09□□□□□ -0.95
CRNDE-204ENST00000558031 RBM46Q8TBY0 533 aaKnown RBP9.08□□□□□ -0.96
CRNDE-204ENST00000558031 TSR3Q9UJK0 312 aaKnown RBP9.08□□□□□ -0.96
CRNDE-204ENST00000558031 HPS5Q9UPZ3 1129 aa9.08□□□□□ -0.96
CRNDE-204ENST00000558031 HDGFP51858 240 aaKnown RBP9.07□□□□□ -0.96
CRNDE-204ENST00000558031 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.07□□□□□ -0.96
CRNDE-204ENST00000558031 WBP1LQ9NX94 342 aa9.07□□□□□ -0.96
CRNDE-204ENST00000558031 SWT1Q5T5J6 900 aaKnown RBP9.06□□□□□ -0.96
CRNDE-204ENST00000558031 RNF40O75150 1001 aa9.05□□□□□ -0.96
CRNDE-204ENST00000558031 PPP4CP60510 307 aa9.05□□□□□ -0.96
CRNDE-204ENST00000558031 PLA2G2EQ9NZK7 142 aa9.05□□□□□ -0.96
CRNDE-204ENST00000558031 DNAJB2P25686 324 aa9.04□□□□□ -0.96
CRNDE-204ENST00000558031 RCCD1A6NED2 376 aa9.03□□□□□ -0.96
CRNDE-204ENST00000558031 OATP04181 439 aa9.03□□□□□ -0.96
CRNDE-204ENST00000558031 LMOD2Q6P5Q4 547 aa9.03□□□□□ -0.96
CRNDE-204ENST00000558031 NYAP1Q6ZVC0 841 aa9.03□□□□□ -0.96
CRNDE-204ENST00000558031 PXYLP1Q8TE99 480 aa9.03□□□□□ -0.96
CRNDE-204ENST00000558031 SLF2Q8IX21 1173 aa9.02□□□□□ -0.97
CRNDE-204ENST00000558031 METTL3Q86U44 580 aaKnown RBP9.01□□□□□ -0.97
CRNDE-204ENST00000558031 TMEM134Q9H6X4 195 aa9.01□□□□□ -0.97
CRNDE-204ENST00000558031 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9□□□□□ -0.97
CRNDE-204ENST00000558031 SLC4A3P48751 1232 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms