RNA–Protein interactions for RNA: ENST00000557789.5

SNX22-202, Transcript of sorting nexin 22, humanhuman

TSL 5

Gene SNX22, Length 3,713 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX22-202ENST00000557789 USP35Q9P2H5 1018 aa17.06■□□□□ 0.32
SNX22-202ENST00000557789 TEX14Q8IWB6 1497 aa17.06■□□□□ 0.32
SNX22-202ENST00000557789 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.06■□□□□ 0.32
SNX22-202ENST00000557789 CUL7Q14999 1698 aa17.06■□□□□ 0.32
SNX22-202ENST00000557789 FRAT1Q92837 279 aaPredicted RBP17.05■□□□□ 0.32
SNX22-202ENST00000557789 ANKRD50Q9ULJ7 1429 aa17.05■□□□□ 0.32
SNX22-202ENST00000557789 TMF1P82094 1093 aa17.04■□□□□ 0.32
SNX22-202ENST00000557789 SLKQ9H2G2 1235 aaPredicted RBP17.04■□□□□ 0.32
SNX22-202ENST00000557789 ARID4BQ4LE39 1312 aaPredicted RBP17.03■□□□□ 0.32
SNX22-202ENST00000557789 SPRYD3Q8NCJ5 442 aa17.03■□□□□ 0.32
SNX22-202ENST00000557789 ROCK1Q13464 1354 aa17.03■□□□□ 0.32
SNX22-202ENST00000557789 TNNT2P45379 298 aaPredicted RBP17.02■□□□□ 0.32
SNX22-202ENST00000557789 FRAT2O75474 233 aaPredicted RBP17.02■□□□□ 0.31
SNX22-202ENST00000557789 TCOF1Q13428 1488 aaKnown RBP17.02■□□□□ 0.31
SNX22-202ENST00000557789 POLR1AO95602 1720 aaPredicted RBP17.01■□□□□ 0.31
SNX22-202ENST00000557789 BCORL1Q5H9F3 1711 aa16.99■□□□□ 0.31
SNX22-202ENST00000557789 GOLGA2Q08379 1002 aa16.98■□□□□ 0.31
SNX22-202ENST00000557789 FAM161AQ3B820 660 aa16.98■□□□□ 0.31
SNX22-202ENST00000557789 SENP3Q9H4L4 574 aaPredicted RBP16.98■□□□□ 0.31
SNX22-202ENST00000557789 ABCA5Q8WWZ7 1642 aa16.97■□□□□ 0.31
SNX22-202ENST00000557789 CENPQQ7L2Z9 268 aaPredicted RBP16.96■□□□□ 0.31
SNX22-202ENST00000557789 APAF1O14727 1248 aa16.95■□□□□ 0.3
SNX22-202ENST00000557789 PZPP20742 1482 aa16.95■□□□□ 0.3
SNX22-202ENST00000557789 JPH4Q96JJ6 628 aa16.94■□□□□ 0.3
SNX22-202ENST00000557789 BCAR3O75815 825 aa16.94■□□□□ 0.3
SNX22-202ENST00000557789 CCDC144AA2RUR9 1427 aa16.93■□□□□ 0.3
SNX22-202ENST00000557789 LRPPRCP42704 1394 aaKnown RBP16.92■□□□□ 0.3
SNX22-202ENST00000557789 CAMSAP2Q08AD1 1489 aa16.91■□□□□ 0.3
SNX22-202ENST00000557789 IQGAP2Q13576 1575 aa16.91■□□□□ 0.3
SNX22-202ENST00000557789 LAMC3Q9Y6N6 1575 aa16.91■□□□□ 0.3
SNX22-202ENST00000557789 BCL2L13Q9BXK5 485 aa16.91■□□□□ 0.3
SNX22-202ENST00000557789 GZF1Q9H116 711 aaPredicted RBP16.91■□□□□ 0.3
SNX22-202ENST00000557789 COG6Q9Y2V7 657 aa16.91■□□□□ 0.3
SNX22-202ENST00000557789 CHGAP10645 457 aaKnown RBP16.9■□□□□ 0.3
SNX22-202ENST00000557789 RRP7AQ9Y3A4 280 aaKnown RBP16.9■□□□□ 0.3
SNX22-202ENST00000557789 CLUAP1Q96AJ1 413 aa16.9■□□□□ 0.3
SNX22-202ENST00000557789 PER1O15534 1290 aaPredicted RBP16.89■□□□□ 0.29
SNX22-202ENST00000557789 UPF2Q9HAU5 1272 aaKnown RBP16.89■□□□□ 0.29
SNX22-202ENST00000557789 PLB1Q6P1J6 1458 aa16.89■□□□□ 0.29
SNX22-202ENST00000557789 PPP2R1AP30153 589 aa16.88■□□□□ 0.29
SNX22-202ENST00000557789 TROQ12816 1431 aaPredicted RBP16.88■□□□□ 0.29
SNX22-202ENST00000557789 PANK1Q8TE04 598 aa16.87■□□□□ 0.29
SNX22-202ENST00000557789 DISP3Q9P2K9 1392 aa16.87■□□□□ 0.29
SNX22-202ENST00000557789 BECN1Q14457 450 aa16.86■□□□□ 0.29
SNX22-202ENST00000557789 C9orf84Q5VXU9 1444 aa16.86■□□□□ 0.29
SNX22-202ENST00000557789 NUP153P49790 1475 aaKnown RBP16.85■□□□□ 0.29
SNX22-202ENST00000557789 DUSP27Q5VZP5 1158 aa16.85■□□□□ 0.29
SNX22-202ENST00000557789 C8orf34Q49A92 452 aa16.83■□□□□ 0.28
SNX22-202ENST00000557789 GPATCH8Q9UKJ3 1502 aaKnown RBP16.83■□□□□ 0.28
SNX22-202ENST00000557789 PARD3Q8TEW0 1356 aa16.83■□□□□ 0.28
SNX22-202ENST00000557789 MBD5Q9P267 1494 aa16.83■□□□□ 0.28
SNX22-202ENST00000557789 POGKQ9P215 609 aa16.82■□□□□ 0.28
SNX22-202ENST00000557789 KIF21AQ7Z4S6 1674 aa16.82■□□□□ 0.28
SNX22-202ENST00000557789 WDR62O43379 1518 aa16.81■□□□□ 0.28
SNX22-202ENST00000557789 RALGAPBQ86X10 1494 aa16.81■□□□□ 0.28
SNX22-202ENST00000557789 ZNF608Q9ULD9 1512 aaPredicted RBP16.81■□□□□ 0.28
SNX22-202ENST00000557789 SPINK5Q9NQ38 1064 aaPredicted RBP16.81■□□□□ 0.28
SNX22-202ENST00000557789 TESK2Q96S53 571 aa16.8■□□□□ 0.28
SNX22-202ENST00000557789 WASHC2CQ9Y4E1 1318 aa16.8■□□□□ 0.28
SNX22-202ENST00000557789 IGHDP01880 384 aa16.8■□□□□ 0.28
SNX22-202ENST00000557789 PLEKHH1Q9ULM0 1364 aa16.79■□□□□ 0.28
SNX22-202ENST00000557789 CDCA8Q53HL2 280 aa16.79■□□□□ 0.28
SNX22-202ENST00000557789 DNMT1P26358 1616 aaKnown RBP16.78■□□□□ 0.28
SNX22-202ENST00000557789 CARMIL2Q6F5E8 1435 aa16.78■□□□□ 0.28
SNX22-202ENST00000557789 SEC24BO95487 1268 aa16.78■□□□□ 0.28
SNX22-202ENST00000557789 KDM5CP41229 1560 aa16.77■□□□□ 0.28
SNX22-202ENST00000557789 CENPJQ9HC77 1338 aaPredicted RBP16.77■□□□□ 0.28
SNX22-202ENST00000557789 ERBINQ96RT1 1412 aa16.77■□□□□ 0.27
SNX22-202ENST00000557789 SLFN5Q08AF3 891 aa16.77■□□□□ 0.27
SNX22-202ENST00000557789 KIAA0586Q9BVV6 1533 aa16.76■□□□□ 0.27
SNX22-202ENST00000557789 TARBP1Q13395 1621 aaKnown RBP16.76■□□□□ 0.27
SNX22-202ENST00000557789 NAP1L5Q96NT1 182 aaPredicted RBP16.74■□□□□ 0.27
SNX22-202ENST00000557789 KDM2BQ8NHM5 1336 aa16.74■□□□□ 0.27
SNX22-202ENST00000557789 MFAP1P55081 439 aaKnown RBP16.74■□□□□ 0.27
SNX22-202ENST00000557789 FTSJ3Q8IY81 847 aaKnown RBP16.73■□□□□ 0.27
SNX22-202ENST00000557789 E9PSI1 815 aa16.73■□□□□ 0.27
SNX22-202ENST00000557789 DMRT2Q9Y5R5 561 aa16.73■□□□□ 0.27
SNX22-202ENST00000557789 MORC1Q86VD1 984 aa16.72■□□□□ 0.27
SNX22-202ENST00000557789 UHRF1BP1Q6BDS2 1440 aa16.72■□□□□ 0.27
SNX22-202ENST00000557789 HSP90AA1P07900 732 aaKnown RBP16.71■□□□□ 0.27
SNX22-202ENST00000557789 KIF14Q15058 1648 aa16.7■□□□□ 0.26
SNX22-202ENST00000557789 DISP1Q96F81 1524 aa16.7■□□□□ 0.26
SNX22-202ENST00000557789 PRAG1Q86YV5 1406 aa16.69■□□□□ 0.26
SNX22-202ENST00000557789 PBRM1Q86U86 1689 aa16.69■□□□□ 0.26
SNX22-202ENST00000557789 SAFB2Q14151 953 aaKnown RBP eCLIP16.69■□□□□ 0.26
SNX22-202ENST00000557789 TNNQ9UQP3 1299 aa16.69■□□□□ 0.26
SNX22-202ENST00000557789 AMER1Q5JTC6 1135 aaPredicted RBP16.68■□□□□ 0.26
SNX22-202ENST00000557789 CGNL1Q0VF96 1302 aa16.68■□□□□ 0.26
SNX22-202ENST00000557789 E9PCH4 1651 aa16.68■□□□□ 0.26
SNX22-202ENST00000557789 CFAP70Q5T0N1 1121 aa16.67■□□□□ 0.26
SNX22-202ENST00000557789 FOXD4L1Q9NU39 408 aa16.67■□□□□ 0.26
SNX22-202ENST00000557789 U2SURPO15042 1029 aaKnown RBP16.67■□□□□ 0.26
SNX22-202ENST00000557789 U2AF1L5P0DN76 240 aaPredicted RBP16.66■□□□□ 0.26
SNX22-202ENST00000557789 U2AF1Q01081 240 aaKnown RBP eCLIP16.66■□□□□ 0.26
SNX22-202ENST00000557789 TRAK1Q9UPV9 953 aa16.66■□□□□ 0.26
SNX22-202ENST00000557789 RAPGEF6Q8TEU7 1601 aa16.66■□□□□ 0.26
SNX22-202ENST00000557789 NUTM2DQ5VT03 806 aaPredicted RBP16.66■□□□□ 0.26
SNX22-202ENST00000557789 PDZRN3Q9UPQ7 1066 aa16.65■□□□□ 0.26
SNX22-202ENST00000557789 MAPK8IP3Q9UPT6 1336 aa16.65■□□□□ 0.26
SNX22-202ENST00000557789 GOLGA6L3A6NEY3 463 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 133.3 ms