RNA–Protein interactions for RNA: ENST00000556849.2

PCNX1-214, Transcript of pecanex 1, humanhuman

TSL 4

Gene PCNX1, Length 595 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1-214ENST00000556849 OTUD5Q96G74 571 aa7.44□□□□□ -1.22
PCNX1-214ENST00000556849 RAD21O60216 631 aa7.43□□□□□ -1.22
PCNX1-214ENST00000556849 FCHSD2O94868 740 aa7.43□□□□□ -1.22
PCNX1-214ENST00000556849 SH3D19Q5HYK7 790 aa7.43□□□□□ -1.22
PCNX1-214ENST00000556849 EEA1Q15075 1411 aa7.43□□□□□ -1.22
PCNX1-214ENST00000556849 CEP162Q5TB80 1403 aa7.42□□□□□ -1.22
PCNX1-214ENST00000556849 GIGYF2Q6Y7W6 1299 aaKnown RBP7.41□□□□□ -1.22
PCNX1-214ENST00000556849 FNBP4Q8N3X1 1017 aaPredicted RBP7.41□□□□□ -1.22
PCNX1-214ENST00000556849 PCDH10Q9P2E7 1040 aa7.41□□□□□ -1.22
PCNX1-214ENST00000556849 CCER2I3L3R5 266 aa7.4□□□□□ -1.22
PCNX1-214ENST00000556849 FOXK1P85037 733 aa7.4□□□□□ -1.22
PCNX1-214ENST00000556849 PDE4CQ08493 712 aa7.4□□□□□ -1.22
PCNX1-214ENST00000556849 CDK11AQ9UQ88 783 aaPredicted RBP7.4□□□□□ -1.22
PCNX1-214ENST00000556849 DSG2Q14126 1118 aa7.39□□□□□ -1.23
PCNX1-214ENST00000556849 ZNF777Q9ULD5 760 aaPredicted RBP7.39□□□□□ -1.23
PCNX1-214ENST00000556849 GRXCR2A6NFK2 248 aa7.38□□□□□ -1.23
PCNX1-214ENST00000556849 C11orf95C9JLR9 678 aaPredicted RBP7.38□□□□□ -1.23
PCNX1-214ENST00000556849 MS4A1P11836 297 aa7.38□□□□□ -1.23
PCNX1-214ENST00000556849 SKIV2LQ15477 1246 aaKnown RBP7.38□□□□□ -1.23
PCNX1-214ENST00000556849 SALL2Q9Y467 1007 aaPredicted RBP7.38□□□□□ -1.23
PCNX1-214ENST00000556849 PATL2C9JE40 543 aaKnown RBP7.37□□□□□ -1.23
PCNX1-214ENST00000556849 OSBPP22059 807 aa7.37□□□□□ -1.23
PCNX1-214ENST00000556849 PTGER2P43116 358 aa7.37□□□□□ -1.23
PCNX1-214ENST00000556849 TMCO4Q5TGY1 634 aa7.37□□□□□ -1.23
PCNX1-214ENST00000556849 ILDR1Q86SU0 546 aaPredicted RBP7.37□□□□□ -1.23
PCNX1-214ENST00000556849 AEBP1Q8IUX7 1158 aa7.37□□□□□ -1.23
PCNX1-214ENST00000556849 TMC2Q8TDI7 906 aa7.37□□□□□ -1.23
PCNX1-214ENST00000556849 EIF5BO60841 1220 aaKnown RBP7.36□□□□□ -1.23
PCNX1-214ENST00000556849 RGS22Q8NE09 1264 aa7.36□□□□□ -1.23
PCNX1-214ENST00000556849 TMEM106CQ9BVX2 250 aa7.36□□□□□ -1.23
PCNX1-214ENST00000556849 SPDYE5A6NIY4 337 aa7.35□□□□□ -1.23
PCNX1-214ENST00000556849 PPP1R15AO75807 674 aaPredicted RBP7.35□□□□□ -1.23
PCNX1-214ENST00000556849 CLCN1P35523 988 aa7.35□□□□□ -1.23
PCNX1-214ENST00000556849 MAP3K9P80192 1104 aa7.35□□□□□ -1.23
PCNX1-214ENST00000556849 DHX57Q6P158 1386 aaKnown RBP7.34□□□□□ -1.23
PCNX1-214ENST00000556849 EIF4G1Q04637 1599 aaKnown RBP7.34□□□□□ -1.23
PCNX1-214ENST00000556849 OXER1Q8TDS5 423 aa7.34□□□□□ -1.23
PCNX1-214ENST00000556849 CUX2O14529 1486 aa7.34□□□□□ -1.23
PCNX1-214ENST00000556849 FECHP22830 423 aa7.33□□□□□ -1.24
PCNX1-214ENST00000556849 DCBLD2Q96PD2 775 aa7.33□□□□□ -1.24
PCNX1-214ENST00000556849 USP35Q9P2H5 1018 aa7.33□□□□□ -1.24
PCNX1-214ENST00000556849 NOP58Q9Y2X3 529 aaKnown RBP7.33□□□□□ -1.24
PCNX1-214ENST00000556849 WASHC2AQ641Q2 1341 aa7.32□□□□□ -1.24
PCNX1-214ENST00000556849 POTEB2H3BUK9 544 aa7.32□□□□□ -1.24
PCNX1-214ENST00000556849 PTGDRQ13258 359 aa7.32□□□□□ -1.24
PCNX1-214ENST00000556849 RETREG2Q8NC44 543 aa7.32□□□□□ -1.24
PCNX1-214ENST00000556849 BANK1Q8NDB2 785 aa7.32□□□□□ -1.24
PCNX1-214ENST00000556849 TMUB1Q9BVT8 246 aa7.32□□□□□ -1.24
PCNX1-214ENST00000556849 PLPP6Q8IY26 295 aa7.31□□□□□ -1.24
PCNX1-214ENST00000556849 POM121Q96HA1 1249 aa7.31□□□□□ -1.24
PCNX1-214ENST00000556849 GPCPD1Q9NPB8 672 aa7.31□□□□□ -1.24
PCNX1-214ENST00000556849 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP7.31□□□□□ -1.246e-7■■□□□ 14.4
PCNX1-214ENST00000556849 WASHC2CQ9Y4E1 1318 aa7.3□□□□□ -1.24
PCNX1-214ENST00000556849 CD44P16070 742 aaKnown RBP7.3□□□□□ -1.24
PCNX1-214ENST00000556849 MFAP1P55081 439 aaKnown RBP7.3□□□□□ -1.24
PCNX1-214ENST00000556849 PPP4R2Q9NY27 417 aa7.3□□□□□ -1.24
PCNX1-214ENST00000556849 COG6Q9Y2V7 657 aa7.3□□□□□ -1.24
PCNX1-214ENST00000556849 ZNF330Q9Y3S2 320 aaPredicted RBP7.3□□□□□ -1.24
PCNX1-214ENST00000556849 GOLGA3Q08378 1498 aa7.3□□□□□ -1.24
PCNX1-214ENST00000556849 WWC1Q8IX03 1113 aa7.29□□□□□ -1.24
PCNX1-214ENST00000556849 PKNOX2Q96KN3 472 aa7.29□□□□□ -1.24
PCNX1-214ENST00000556849 REPIN1Q9BWE0 567 aaKnown RBP7.29□□□□□ -1.24
PCNX1-214ENST00000556849 GZF1Q9H116 711 aaPredicted RBP7.29□□□□□ -1.24
PCNX1-214ENST00000556849 RTL5Q5HYW3 569 aaPredicted RBP7.28□□□□□ -1.24
PCNX1-214ENST00000556849 MTMR7Q9Y216 660 aa7.28□□□□□ -1.24
PCNX1-214ENST00000556849 TBC1D12O60347 775 aa7.27□□□□□ -1.25
PCNX1-214ENST00000556849 SSTR3P32745 418 aaPredicted RBP7.27□□□□□ -1.25
PCNX1-214ENST00000556849 MICALL2Q8IY33 904 aa7.27□□□□□ -1.25
PCNX1-214ENST00000556849 GNL3Q9BVP2 549 aaKnown RBP eCLIP7.27□□□□□ -1.25
PCNX1-214ENST00000556849 VPS8Q8N3P4 1428 aa7.27□□□□□ -1.25
PCNX1-214ENST00000556849 CLCN6P51797 869 aa7.26□□□□□ -1.25
PCNX1-214ENST00000556849 IRF5Q13568 498 aa7.26□□□□□ -1.25
PCNX1-214ENST00000556849 TMEM259Q4ZIN3 620 aa7.26□□□□□ -1.25
PCNX1-214ENST00000556849 FBXW7Q969H0 707 aa7.26□□□□□ -1.25
PCNX1-214ENST00000556849 CCDC136Q96JN2 1154 aa7.26□□□□□ -1.25
PCNX1-214ENST00000556849 ZRANB1Q9UGI0 708 aa7.26□□□□□ -1.25
PCNX1-214ENST00000556849 ATP1B4Q9UN42 357 aaPredicted RBP7.26□□□□□ -1.25
PCNX1-214ENST00000556849 SOCS7O14512 581 aa7.25□□□□□ -1.25
PCNX1-214ENST00000556849 KIF3CO14782 793 aa7.25□□□□□ -1.25
PCNX1-214ENST00000556849 TIE1P35590 1138 aa7.25□□□□□ -1.25
PCNX1-214ENST00000556849 DIXDC1Q155Q3 683 aa7.25□□□□□ -1.25
PCNX1-214ENST00000556849 GLIPR1L2Q4G1C9 344 aa7.25□□□□□ -1.25
PCNX1-214ENST00000556849 LCE2DQ5TA82 110 aaPredicted RBP7.25□□□□□ -1.25
PCNX1-214ENST00000556849 DDX12PQ92771 950 aa7.25□□□□□ -1.25
PCNX1-214ENST00000556849 BEGAINQ9BUH8 593 aa7.25□□□□□ -1.25
PCNX1-214ENST00000556849 CEP164Q9UPV0 1460 aa7.24□□□□□ -1.25
PCNX1-214ENST00000556849 MDM2Q00987 491 aaPredicted RBP7.24□□□□□ -1.25
PCNX1-214ENST00000556849 KCNA1Q09470 495 aa7.24□□□□□ -1.25
PCNX1-214ENST00000556849 PROCA1Q8NCQ7 364 aaPredicted RBP7.24□□□□□ -1.25
PCNX1-214ENST00000556849 IPO9Q96P70 1041 aaKnown RBP7.24□□□□□ -1.25
PCNX1-214ENST00000556849 PRM3Q9NNZ6 103 aa7.24□□□□□ -1.25
PCNX1-214ENST00000556849 ITGAEP38570 1179 aa7.23□□□□□ -1.25
PCNX1-214ENST00000556849 BAZ1BQ9UIG0 1483 aaKnown RBP7.23□□□□□ -1.25
PCNX1-214ENST00000556849 C2orf72A6NCS6 295 aa7.22□□□□□ -1.25
PCNX1-214ENST00000556849 CLK2P49760 499 aaKnown RBP7.22□□□□□ -1.25
PCNX1-214ENST00000556849 KCNH8Q96L42 1107 aa7.22□□□□□ -1.25
PCNX1-214ENST00000556849 FAM217BQ9NTX9 383 aaPredicted RBP7.22□□□□□ -1.25
PCNX1-214ENST00000556849 POLR3EQ9NVU0 708 aa7.22□□□□□ -1.25
PCNX1-214ENST00000556849 KIF21BO75037 1637 aa7.22□□□□□ -1.25
PCNX1-214ENST00000556849 NACADO15069 1562 aa7.21□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 69.2 ms