RNA–Protein interactions for RNA: ENST00000556564.5

PTPN21-208, Transcript of protein tyrosine phosphatase, non-receptor type 21, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPN21, Length 6,166 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN21-208ENST00000556564 HECW1Q76N89 1606 aa22.19■■□□□ 1.14
PTPN21-208ENST00000556564 KCNJ4P48050 445 aa22.18■■□□□ 1.14
PTPN21-208ENST00000556564 RAPGEF3O95398 923 aa22.18■■□□□ 1.14
PTPN21-208ENST00000556564 ATF3P18847 181 aa22.17■■□□□ 1.14
PTPN21-208ENST00000556564 NAP1L2Q9ULW6 460 aaPredicted RBP22.17■■□□□ 1.14
PTPN21-208ENST00000556564 SCAPERQ9BY12 1400 aa22.15■■□□□ 1.14
PTPN21-208ENST00000556564 USP47Q96K76 1375 aa22.15■■□□□ 1.14
PTPN21-208ENST00000556564 STK31Q9BXU1 1019 aa22.15■■□□□ 1.14
PTPN21-208ENST00000556564 TULP1O00294 542 aaPredicted RBP22.14■■□□□ 1.14
PTPN21-208ENST00000556564 IPO8O15397 1037 aaKnown RBP22.14■■□□□ 1.13
PTPN21-208ENST00000556564 ITPRIPQ8IWB1 547 aa22.14■■□□□ 1.13
PTPN21-208ENST00000556564 CHMP3Q9Y3E7 222 aa22.14■■□□□ 1.13
PTPN21-208ENST00000556564 FGD1P98174 961 aa22.14■■□□□ 1.13
PTPN21-208ENST00000556564 PPP4R2Q9NY27 417 aa22.14■■□□□ 1.13
PTPN21-208ENST00000556564 DDRGK1Q96HY6 314 aa22.13■■□□□ 1.13
PTPN21-208ENST00000556564 CGNL1Q0VF96 1302 aa22.13■■□□□ 1.13
PTPN21-208ENST00000556564 B4GALNT3Q6L9W6 998 aa22.13■■□□□ 1.13
PTPN21-208ENST00000556564 RRP7AQ9Y3A4 280 aaKnown RBP22.13■■□□□ 1.13
PTPN21-208ENST00000556564 TMEM132EQ6IEE7 984 aa22.12■■□□□ 1.13
PTPN21-208ENST00000556564 EHBP1L1Q8N3D4 1523 aa22.12■■□□□ 1.13
PTPN21-208ENST00000556564 ABCA10Q8WWZ4 1543 aa22.12■■□□□ 1.13
PTPN21-208ENST00000556564 NCLP19338 710 aaKnown RBP22.12■■□□□ 1.13
PTPN21-208ENST00000556564 PRXQ9BXM0 1461 aa22.1■■□□□ 1.13
PTPN21-208ENST00000556564 IQGAP2Q13576 1575 aa22.1■■□□□ 1.13
PTPN21-208ENST00000556564 TMX4Q9H1E5 349 aaPredicted RBP22.1■■□□□ 1.13
PTPN21-208ENST00000556564 TXNDC2Q86VQ3 553 aa22.1■■□□□ 1.13
PTPN21-208ENST00000556564 C1orf141Q5JVX7 400 aa22.09■■□□□ 1.13
PTPN21-208ENST00000556564 KIAA0586Q9BVV6 1533 aa22.09■■□□□ 1.13
PTPN21-208ENST00000556564 CDK13Q14004 1512 aaKnown RBP22.09■■□□□ 1.13
PTPN21-208ENST00000556564 SLC4A10Q6U841 1118 aa22.08■■□□□ 1.13
PTPN21-208ENST00000556564 URB2Q14146 1524 aaKnown RBP22.08■■□□□ 1.12
PTPN21-208ENST00000556564 NUTM2GQ5VZR2 741 aa22.08■■□□□ 1.12
PTPN21-208ENST00000556564 SMC4Q9NTJ3 1288 aa22.07■■□□□ 1.12
PTPN21-208ENST00000556564 NLRP13Q86W25 1043 aa22.07■■□□□ 1.12
PTPN21-208ENST00000556564 C9orf84Q5VXU9 1444 aa22.07■■□□□ 1.12
PTPN21-208ENST00000556564 EIF5BO60841 1220 aaKnown RBP22.07■■□□□ 1.12
PTPN21-208ENST00000556564 TROQ12816 1431 aaPredicted RBP22.07■■□□□ 1.12
PTPN21-208ENST00000556564 LMOD3Q0VAK6 560 aa22.06■■□□□ 1.12
PTPN21-208ENST00000556564 ISY1Q9ULR0 285 aaKnown RBP22.05■■□□□ 1.12
PTPN21-208ENST00000556564 TAF7LQ5H9L4 462 aa22.05■■□□□ 1.12
PTPN21-208ENST00000556564 CENPJQ9HC77 1338 aaPredicted RBP22.05■■□□□ 1.12
PTPN21-208ENST00000556564 CABP2Q9NPB3 220 aa22.05■■□□□ 1.12
PTPN21-208ENST00000556564 RCAN3Q9UKA8 241 aa22.04■■□□□ 1.12
PTPN21-208ENST00000556564 PLEKHH2Q8IVE3 1493 aa22.04■■□□□ 1.12
PTPN21-208ENST00000556564 CUL7Q14999 1698 aa22.04■■□□□ 1.12
PTPN21-208ENST00000556564 MSH5O43196 834 aa22.03■■□□□ 1.12
PTPN21-208ENST00000556564 GRIN2AQ12879 1464 aa22.03■■□□□ 1.12
PTPN21-208ENST00000556564 ZNF608Q9ULD9 1512 aaPredicted RBP22.02■■□□□ 1.12
PTPN21-208ENST00000556564 SYTL4Q96C24 671 aaPredicted RBP22.02■■□□□ 1.12
PTPN21-208ENST00000556564 MYBBP1AQ9BQG0 1328 aaKnown RBP22.02■■□□□ 1.12
PTPN21-208ENST00000556564 MAGI1Q96QZ7 1491 aaPredicted RBP22.01■■□□□ 1.11
PTPN21-208ENST00000556564 PROSER2Q86WR7 435 aaPredicted RBP22■■□□□ 1.11
PTPN21-208ENST00000556564 GTF2E1P29083 439 aaPredicted RBP22■■□□□ 1.11
PTPN21-208ENST00000556564 SUPT6HQ7KZ85 1726 aaKnown RBP21.99■■□□□ 1.11
PTPN21-208ENST00000556564 CHMP4AQ9BY43 222 aa21.99■■□□□ 1.11
PTPN21-208ENST00000556564 GOLGA6L22H0YM25 854 aa21.98■■□□□ 1.11
PTPN21-208ENST00000556564 CDK11BP21127 795 aaKnown RBP21.98■■□□□ 1.11
PTPN21-208ENST00000556564 GORABQ5T7V8 394 aa21.98■■□□□ 1.11
PTPN21-208ENST00000556564 CLUAP1Q96AJ1 413 aa21.98■■□□□ 1.11
PTPN21-208ENST00000556564 ELL2O00472 640 aaPredicted RBP21.97■■□□□ 1.11
PTPN21-208ENST00000556564 G3V3G9 751 aa21.97■■□□□ 1.11
PTPN21-208ENST00000556564 ESCO1Q5FWF5 840 aa21.97■■□□□ 1.11
PTPN21-208ENST00000556564 DCAF8Q5TAQ9 597 aa21.97■■□□□ 1.11
PTPN21-208ENST00000556564 HSP90AB1P08238 724 aaKnown RBP21.97■■□□□ 1.11
PTPN21-208ENST00000556564 ARHGEF11O15085 1522 aa21.97■■□□□ 1.11
PTPN21-208ENST00000556564 NGEFQ8N5V2 710 aa21.96■■□□□ 1.11
PTPN21-208ENST00000556564 PLB1Q6P1J6 1458 aa21.96■■□□□ 1.11
PTPN21-208ENST00000556564 THEMISQ8N1K5 641 aaPredicted RBP21.96■■□□□ 1.11
PTPN21-208ENST00000556564 RRBP1Q9P2E9 1410 aaKnown RBP21.96■■□□□ 1.11
PTPN21-208ENST00000556564 CFAP70Q5T0N1 1121 aa21.95■■□□□ 1.11
PTPN21-208ENST00000556564 CD109Q6YHK3 1445 aa21.95■■□□□ 1.1
PTPN21-208ENST00000556564 ZRSR1Q15695 479 aaKnown RBP21.95■■□□□ 1.1
PTPN21-208ENST00000556564 EPRSP07814 1512 aaKnown RBP21.95■■□□□ 1.1
PTPN21-208ENST00000556564 TEFQ10587 303 aa21.94■■□□□ 1.1
PTPN21-208ENST00000556564 POGZQ7Z3K3 1410 aa21.94■■□□□ 1.1
PTPN21-208ENST00000556564 TIAM1Q13009 1591 aa21.93■■□□□ 1.1
PTPN21-208ENST00000556564 TTC5Q8N0Z6 440 aa21.93■■□□□ 1.1
PTPN21-208ENST00000556564 DIAPH1O60610 1272 aaKnown RBP21.93■■□□□ 1.1
PTPN21-208ENST00000556564 MCCP23508 829 aa21.91■■□□□ 1.1
PTPN21-208ENST00000556564 GGNBP2Q9H3C7 697 aa21.91■■□□□ 1.1
PTPN21-208ENST00000556564 PHF23Q9BUL5 403 aaPredicted RBP21.9■■□□□ 1.1
PTPN21-208ENST00000556564 PMFBP1Q8TBY8 1022 aa21.9■■□□□ 1.1
PTPN21-208ENST00000556564 PRAM1Q96QH2 718 aa21.9■■□□□ 1.1
PTPN21-208ENST00000556564 EIF2S2P20042 333 aaKnown RBP21.9■■□□□ 1.1
PTPN21-208ENST00000556564 PCF11O94913 1555 aaKnown RBP21.9■■□□□ 1.1
PTPN21-208ENST00000556564 DAPK1P53355 1430 aa21.89■■□□□ 1.1
PTPN21-208ENST00000556564 NECTIN2Q92692 538 aa21.89■■□□□ 1.09
PTPN21-208ENST00000556564 RWDD1Q9H446 243 aaPredicted RBP21.89■■□□□ 1.09
PTPN21-208ENST00000556564 MIA2Q96PC5 1412 aa21.89■■□□□ 1.09
PTPN21-208ENST00000556564 PEG3Q9GZU2 1588 aa21.89■■□□□ 1.09
PTPN21-208ENST00000556564 NLRP6P59044 892 aa21.88■■□□□ 1.09
PTPN21-208ENST00000556564 NLRP2Q9NX02 1062 aa21.87■■□□□ 1.09
PTPN21-208ENST00000556564 KIF14Q15058 1648 aa21.87■■□□□ 1.09
PTPN21-208ENST00000556564 KIAA1211Q6ZU35 1233 aa21.86■■□□□ 1.09
PTPN21-208ENST00000556564 ANKLE2Q86XL3 938 aa21.86■■□□□ 1.09
PTPN21-208ENST00000556564 STAC3Q96MF2 364 aa21.86■■□□□ 1.09
PTPN21-208ENST00000556564 ABTB2Q8N961 1025 aa21.86■■□□□ 1.09
PTPN21-208ENST00000556564 BCL2L13Q9BXK5 485 aa21.86■■□□□ 1.09
PTPN21-208ENST00000556564 HMOX1P09601 288 aa21.86■■□□□ 1.09
PTPN21-208ENST00000556564 SLC26A8Q96RN1 970 aa21.86■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms