RNA–Protein interactions for RNA: ENST00000555718.5

PPP4R3A-210, Transcript of protein phosphatase 4 regulatory subunit 3A, human

TSL 5

Gene PPP4R3A, Length 819 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PPP4R3A-210	ENST00000555718	SEMA3E	O15041	775 aa		13.92	□□□□□ -0.18
PPP4R3A-210	ENST00000555718	FBXW7	Q969H0	707 aa		13.92	□□□□□ -0.18
PPP4R3A-210	ENST00000555718	EPAS1	Q99814	870 aa		13.92	□□□□□ -0.18
PPP4R3A-210	ENST00000555718	PLSCR2	Q9NRY7	297 aa		13.91	□□□□□ -0.18
PPP4R3A-210	ENST00000555718	COL9A1	P20849	921 aa		13.9	□□□□□ -0.18
PPP4R3A-210	ENST00000555718	OSBP	P22059	807 aa		13.9	□□□□□ -0.18
PPP4R3A-210	ENST00000555718	PTPRE	P23469	700 aa		13.9	□□□□□ -0.18
PPP4R3A-210	ENST00000555718	EN1	Q05925	392 aa	Predicted RBP	13.89	□□□□□ -0.19
PPP4R3A-210	ENST00000555718	TSR1	Q2NL82	804 aa	Known RBP	13.89	□□□□□ -0.19
PPP4R3A-210	ENST00000555718	C6orf132	Q5T0Z8	1188 aa		13.87	□□□□□ -0.19
PPP4R3A-210	ENST00000555718	ADGRD1	Q6QNK2	874 aa		13.86	□□□□□ -0.19
PPP4R3A-210	ENST00000555718	MAP3K7	O43318	606 aa		13.85	□□□□□ -0.19
PPP4R3A-210	ENST00000555718	ZBED2	Q9BTP6	218 aa		13.84	□□□□□ -0.19
PPP4R3A-210	ENST00000555718	CDHR5	Q9HBB8	845 aa		13.83	□□□□□ -0.2
PPP4R3A-210	ENST00000555718	PPP1R3G	B7ZBB8	358 aa		13.82	□□□□□ -0.2
PPP4R3A-210	ENST00000555718	MMRN1	Q13201	1228 aa		13.82	□□□□□ -0.2
PPP4R3A-210	ENST00000555718	KCNH8	Q96L42	1107 aa		13.82	□□□□□ -0.2
PPP4R3A-210	ENST00000555718	VPS9D1	Q9Y2B5	631 aa		13.82	□□□□□ -0.2
PPP4R3A-210	ENST00000555718	PROX2	Q3B8N5	592 aa		13.81	□□□□□ -0.2
PPP4R3A-210	ENST00000555718	TESPA1	A2RU30	521 aa	Predicted RBP	13.8	□□□□□ -0.2
PPP4R3A-210	ENST00000555718	TK2	O00142	265 aa		13.79	□□□□□ -0.2
PPP4R3A-210	ENST00000555718	HR	O43593	1189 aa		13.78	□□□□□ -0.2
PPP4R3A-210	ENST00000555718	SLC4A5	Q9BY07	1137 aa		13.76	□□□□□ -0.21
PPP4R3A-210	ENST00000555718	MYT1L	Q9UL68	1186 aa		13.73	□□□□□ -0.21
PPP4R3A-210	ENST00000555718	NPDC1	Q9NQX5	325 aa	Predicted RBP	13.72	□□□□□ -0.21
PPP4R3A-210	ENST00000555718	BHMG1	C9JSJ3	638 aa	Predicted RBP	13.7	□□□□□ -0.22
PPP4R3A-210	ENST00000555718	RBM26	Q5T8P6	1007 aa	Known RBP	13.7	□□□□□ -0.22
PPP4R3A-210	ENST00000555718	FAM198A	Q9UFP1	575 aa		13.69	□□□□□ -0.22
PPP4R3A-210	ENST00000555718	TSKS	Q9UJT2	592 aa		13.68	□□□□□ -0.22
PPP4R3A-210	ENST00000555718	TRIM6-TRIM34	B2RNG4	842 aa		13.67	□□□□□ -0.22
PPP4R3A-210	ENST00000555718	RNF166	Q96A37	237 aa	Predicted RBP	13.67	□□□□□ -0.22
PPP4R3A-210	ENST00000555718	KIAA1468	Q9P260	1216 aa		13.67	□□□□□ -0.22
PPP4R3A-210	ENST00000555718	C3orf80	F5H4A9	247 aa		13.66	□□□□□ -0.22
PPP4R3A-210	ENST00000555718	CDCA7L	Q96GN5	454 aa		13.66	□□□□□ -0.22
PPP4R3A-210	ENST00000555718	RABGEF1	Q9UJ41	708 aa		13.65	□□□□□ -0.22
PPP4R3A-210	ENST00000555718	NUTM2F	A1L443	756 aa		13.64	□□□□□ -0.23
PPP4R3A-210	ENST00000555718	PRSS12	P56730	875 aa		13.64	□□□□□ -0.23
PPP4R3A-210	ENST00000555718	PTGDR	Q13258	359 aa		13.63	□□□□□ -0.23
PPP4R3A-210	ENST00000555718	BCAN	Q96GW7	911 aa		13.62	□□□□□ -0.23
PPP4R3A-210	ENST00000555718	SEPT9	Q9UHD8	586 aa	Predicted RBP	13.62	□□□□□ -0.23
PPP4R3A-210	ENST00000555718	CERK	Q8TCT0	537 aa		13.61	□□□□□ -0.23
PPP4R3A-210	ENST00000555718	PADI6	Q6TGC4	694 aa		13.6	□□□□□ -0.23
PPP4R3A-210	ENST00000555718	SMYD5	Q6GMV2	418 aa		13.59	□□□□□ -0.23
PPP4R3A-210	ENST00000555718	MRPL50	Q8N5N7	158 aa	Known RBP	13.59	□□□□□ -0.23
PPP4R3A-210	ENST00000555718	SMAP	O00193	183 aa		13.58	□□□□□ -0.24
PPP4R3A-210	ENST00000555718	GPR37	O15354	613 aa		13.58	□□□□□ -0.24
PPP4R3A-210	ENST00000555718	ONECUT3	O60422	494 aa	Predicted RBP	13.58	□□□□□ -0.24
PPP4R3A-210	ENST00000555718	TTC13	Q8NBP0	860 aa		13.58	□□□□□ -0.24
PPP4R3A-210	ENST00000555718	NBPF3	Q9H094	633 aa		13.58	□□□□□ -0.24
PPP4R3A-210	ENST00000555718	KCTD12	Q96CX2	325 aa	Known RBP	13.57	□□□□□ -0.24
PPP4R3A-210	ENST00000555718	STAC3	Q96MF2	364 aa		13.57	□□□□□ -0.24
PPP4R3A-210	ENST00000555718	PACS2	Q86VP3	889 aa		13.54	□□□□□ -0.24
PPP4R3A-210	ENST00000555718	RBM27	Q9P2N5	1060 aa	Known RBP	13.54	□□□□□ -0.24
PPP4R3A-210	ENST00000555718	FCHSD2	O94868	740 aa		13.52	□□□□□ -0.25
PPP4R3A-210	ENST00000555718	FECH	P22830	423 aa		13.51	□□□□□ -0.25
PPP4R3A-210	ENST00000555718	FAM161A	Q3B820	660 aa		13.51	□□□□□ -0.25
PPP4R3A-210	ENST00000555718	TATDN2	Q93075	761 aa		13.51	□□□□□ -0.25
PPP4R3A-210	ENST00000555718	PNMA3	Q9UL41	463 aa		13.51	□□□□□ -0.25
PPP4R3A-210	ENST00000555718	NUDT18	Q6ZVK8	323 aa		13.5	□□□□□ -0.25
PPP4R3A-210	ENST00000555718	LAPTM4B	Q86VI4	370 aa		13.5	□□□□□ -0.25
PPP4R3A-210	ENST00000555718	FAM98C	Q17RN3	349 aa	Known RBP	13.49	□□□□□ -0.25
PPP4R3A-210	ENST00000555718	DHX30	Q7L2E3	1194 aa	Known RBP eCLIP	13.49	□□□□□ -0.25
PPP4R3A-210	ENST00000555718	GPIHBP1	Q8IV16	184 aa		13.49	□□□□□ -0.25
PPP4R3A-210	ENST00000555718	WNT2B	Q93097	391 aa		13.49	□□□□□ -0.25
PPP4R3A-210	ENST00000555718	ZFR	Q96KR1	1074 aa	Known RBP	13.49	□□□□□ -0.25
PPP4R3A-210	ENST00000555718	GOLGA8CP	A6NN73	597 aa		13.48	□□□□□ -0.25
PPP4R3A-210	ENST00000555718	NBPF26	B4DH59	902 aa		13.47	□□□□□ -0.25
PPP4R3A-210	ENST00000555718	THSD4	Q6ZMP0	1018 aa		13.47	□□□□□ -0.25
PPP4R3A-210	ENST00000555718	BCAM	P50895	628 aa		13.46	□□□□□ -0.25
PPP4R3A-210	ENST00000555718	HIC1	Q14526	733 aa		13.45	□□□□□ -0.26
PPP4R3A-210	ENST00000555718	ADGRG1	Q9Y653	693 aa		13.45	□□□□□ -0.26
PPP4R3A-210	ENST00000555718	EYA1	Q99502	592 aa		13.44	□□□□□ -0.26
PPP4R3A-210	ENST00000555718	GNPAT	O15228	680 aa		13.43	□□□□□ -0.26
PPP4R3A-210	ENST00000555718	PTPN5	P54829	565 aa		13.43	□□□□□ -0.26
PPP4R3A-210	ENST00000555718	LMOD2	Q6P5Q4	547 aa		13.43	□□□□□ -0.26
PPP4R3A-210	ENST00000555718	ANKK1	Q8NFD2	765 aa		13.43	□□□□□ -0.26
PPP4R3A-210	ENST00000555718	TULP1	O00294	542 aa	Predicted RBP	13.42	□□□□□ -0.26
PPP4R3A-210	ENST00000555718	SOWAHB	A6NEL2	793 aa		13.4	□□□□□ -0.26
PPP4R3A-210	ENST00000555718	SAMD7	Q7Z3H4	446 aa		13.4	□□□□□ -0.26
PPP4R3A-210	ENST00000555718	HCST	Q9UBK5	93 aa		13.39	□□□□□ -0.27
PPP4R3A-210	ENST00000555718	LRCH3	Q96II8	777 aa		13.35	□□□□□ -0.27
PPP4R3A-210	ENST00000555718	CDKN2AIP	Q9NXV6	580 aa	Predicted RBP	13.35	□□□□□ -0.27
PPP4R3A-210	ENST00000555718	SWT1	Q5T5J6	900 aa	Known RBP	13.34	□□□□□ -0.27
PPP4R3A-210	ENST00000555718	WBP1L	Q9NX94	342 aa		13.34	□□□□□ -0.27
PPP4R3A-210	ENST00000555718	RBM46	Q8TBY0	533 aa	Known RBP	13.33	□□□□□ -0.28
PPP4R3A-210	ENST00000555718	METTL3	Q86U44	580 aa	Known RBP	13.32	□□□□□ -0.28
PPP4R3A-210	ENST00000555718	PXYLP1	Q8TE99	480 aa		13.32	□□□□□ -0.28
PPP4R3A-210	ENST00000555718	NLRP7	Q8WX94	980 aa		13.32	□□□□□ -0.28
PPP4R3A-210	ENST00000555718	HPS5	Q9UPZ3	1129 aa		13.32	□□□□□ -0.28
PPP4R3A-210	ENST00000555718	RCCD1	A6NED2	376 aa		13.31	□□□□□ -0.28
PPP4R3A-210	ENST00000555718	PHOX2B	Q99453	314 aa		13.31	□□□□□ -0.28
PPP4R3A-210	ENST00000555718	ZC3H15	Q8WU90	426 aa	Known RBP	13.29	□□□□□ -0.28
PPP4R3A-210	ENST00000555718	RNF40	O75150	1001 aa		13.28	□□□□□ -0.28
PPP4R3A-210	ENST00000555718	DNAJB2	P25686	324 aa		13.28	□□□□□ -0.28
PPP4R3A-210	ENST00000555718	TMEM134	Q9H6X4	195 aa		13.28	□□□□□ -0.28
PPP4R3A-210	ENST00000555718	OAT	P04181	439 aa		13.27	□□□□□ -0.29
PPP4R3A-210	ENST00000555718	MAP2K5	Q13163	448 aa		13.27	□□□□□ -0.29
PPP4R3A-210	ENST00000555718	TSR3	Q9UJK0	312 aa	Known RBP	13.27	□□□□□ -0.29
PPP4R3A-210	ENST00000555718	RPL17-C18orf32	A0A0A6YYL6	228 aa	Known RBP	13.23	□□□□□ -0.29
PPP4R3A-210	ENST00000555718	IRF6	O14896	467 aa		13.23	□□□□□ -0.29

Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms