RNA–Protein interactions for RNA: ENST00000555379.1

LINC00641-201, long intergenic non-protein coding RNA 641, humanhuman

Gene LINC00641, Length 5,425 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00641-201ENST00000555379 KIF15Q9NS87 1388 aa10.65□□□□□ -0.71
LINC00641-201ENST00000555379 CALRP27797 417 aaKnown RBP10.64□□□□□ -0.71
LINC00641-201ENST00000555379 RPGRIP1LQ68CZ1 1315 aa10.64□□□□□ -0.71
LINC00641-201ENST00000555379 PRDM2Q13029 1718 aa10.63□□□□□ -0.71
LINC00641-201ENST00000555379 PAK3O75914 559 aaPredicted RBP10.63□□□□□ -0.71
LINC00641-201ENST00000555379 RAD54L2Q9Y4B4 1467 aa10.63□□□□□ -0.71
LINC00641-201ENST00000555379 DAPK1P53355 1430 aa10.63□□□□□ -0.71
LINC00641-201ENST00000555379 HSP90AA2PQ14568 343 aaPredicted RBP10.63□□□□□ -0.71
LINC00641-201ENST00000555379 FGD6Q6ZV73 1430 aa10.63□□□□□ -0.71
LINC00641-201ENST00000555379 TNNT3P45378 269 aaPredicted RBP10.62□□□□□ -0.71
LINC00641-201ENST00000555379 AMPHP49418 695 aa10.62□□□□□ -0.71
LINC00641-201ENST00000555379 NOP58Q9Y2X3 529 aaKnown RBP10.62□□□□□ -0.71
LINC00641-201ENST00000555379 SALL2Q9Y467 1007 aaPredicted RBP10.62□□□□□ -0.71
LINC00641-201ENST00000555379 TROQ12816 1431 aaPredicted RBP10.62□□□□□ -0.71
LINC00641-201ENST00000555379 NLRP13Q86W25 1043 aa10.62□□□□□ -0.71
LINC00641-201ENST00000555379 LAS1LQ9Y4W2 734 aaKnown RBP10.62□□□□□ -0.71
LINC00641-201ENST00000555379 AMER1Q5JTC6 1135 aaPredicted RBP10.62□□□□□ -0.71
LINC00641-201ENST00000555379 COG3Q96JB2 828 aa10.62□□□□□ -0.71
LINC00641-201ENST00000555379 A0A0U1RQG5 324 aaPredicted RBP10.62□□□□□ -0.71
LINC00641-201ENST00000555379 PSME1Q06323 249 aa10.61□□□□□ -0.71
LINC00641-201ENST00000555379 THEMISQ8N1K5 641 aaPredicted RBP10.61□□□□□ -0.71
LINC00641-201ENST00000555379 PPP4R2Q9NY27 417 aa10.61□□□□□ -0.71
LINC00641-201ENST00000555379 FGD1P98174 961 aa10.61□□□□□ -0.71
LINC00641-201ENST00000555379 SLC52A1Q9NWF4 448 aa10.61□□□□□ -0.71
LINC00641-201ENST00000555379 STK26Q9P289 416 aa10.61□□□□□ -0.71
LINC00641-201ENST00000555379 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.61□□□□□ -0.71
LINC00641-201ENST00000555379 KCNJ4P48050 445 aa10.61□□□□□ -0.71
LINC00641-201ENST00000555379 AQRO60306 1485 aaKnown RBP eCLIP10.6□□□□□ -0.71
LINC00641-201ENST00000555379 POLA1P09884 1462 aaPredicted RBP10.6□□□□□ -0.71
LINC00641-201ENST00000555379 SNAPC4Q5SXM2 1469 aa10.6□□□□□ -0.71
LINC00641-201ENST00000555379 DCAF8L1A6NGE4 600 aa10.6□□□□□ -0.71
LINC00641-201ENST00000555379 AAMPQ13685 434 aa10.6□□□□□ -0.71
LINC00641-201ENST00000555379 ATF3P18847 181 aa10.6□□□□□ -0.71
LINC00641-201ENST00000555379 PMFBP1Q8TBY8 1022 aa10.6□□□□□ -0.71
LINC00641-201ENST00000555379 HSPA5P11021 654 aaKnown RBP10.59□□□□□ -0.71
LINC00641-201ENST00000555379 ROCK1Q13464 1354 aa10.59□□□□□ -0.71
LINC00641-201ENST00000555379 C1orf141Q5JVX7 400 aa10.59□□□□□ -0.71
LINC00641-201ENST00000555379 CCDC9Q9Y3X0 531 aaKnown RBP10.59□□□□□ -0.71
LINC00641-201ENST00000555379 APPP05067 770 aa10.59□□□□□ -0.71
LINC00641-201ENST00000555379 RWDD1Q9H446 243 aaPredicted RBP10.59□□□□□ -0.71
LINC00641-201ENST00000555379 CC2D1BQ5T0F9 858 aaKnown RBP10.58□□□□□ -0.72
LINC00641-201ENST00000555379 KIAA1211Q6ZU35 1233 aa10.58□□□□□ -0.72
LINC00641-201ENST00000555379 KIF3AQ9Y496 699 aa10.58□□□□□ -0.72
LINC00641-201ENST00000555379 ANKRD50Q9ULJ7 1429 aa10.58□□□□□ -0.72
LINC00641-201ENST00000555379 LRRC9Q6ZRR7 1453 aa10.58□□□□□ -0.72
LINC00641-201ENST00000555379 U2AF1L5P0DN76 240 aaPredicted RBP10.57□□□□□ -0.72
LINC00641-201ENST00000555379 U2AF1Q01081 240 aaKnown RBP eCLIP10.57□□□□□ -0.72
LINC00641-201ENST00000555379 GPRASP1Q5JY77 1395 aa10.57□□□□□ -0.72
LINC00641-201ENST00000555379 IQGAP2Q13576 1575 aa10.57□□□□□ -0.72
LINC00641-201ENST00000555379 TEX14Q8IWB6 1497 aa10.56□□□□□ -0.72
LINC00641-201ENST00000555379 KANK4Q5T7N3 995 aaPredicted RBP10.56□□□□□ -0.72
LINC00641-201ENST00000555379 SIN3AQ96ST3 1273 aa10.56□□□□□ -0.72
LINC00641-201ENST00000555379 SMC4Q9NTJ3 1288 aa10.55□□□□□ -0.72
LINC00641-201ENST00000555379 NCOA2Q15596 1464 aa10.55□□□□□ -0.72
LINC00641-201ENST00000555379 EVA1CP58658 441 aa10.55□□□□□ -0.72
LINC00641-201ENST00000555379 DMRT2Q9Y5R5 561 aa10.55□□□□□ -0.72
LINC00641-201ENST00000555379 TAF7LQ5H9L4 462 aa10.55□□□□□ -0.72
LINC00641-201ENST00000555379 PRXQ9BXM0 1461 aa10.54□□□□□ -0.72
LINC00641-201ENST00000555379 G3V3G9 751 aa10.54□□□□□ -0.72
LINC00641-201ENST00000555379 DCAF8Q5TAQ9 597 aa10.54□□□□□ -0.72
LINC00641-201ENST00000555379 PLB1Q6P1J6 1458 aa10.54□□□□□ -0.72
LINC00641-201ENST00000555379 SUPT6HQ7KZ85 1726 aaKnown RBP10.54□□□□□ -0.72
LINC00641-201ENST00000555379 PDE4CQ08493 712 aa10.54□□□□□ -0.72
LINC00641-201ENST00000555379 ANKRD30BQ9BXX2 1392 aa10.54□□□□□ -0.72
LINC00641-201ENST00000555379 MYBBP1AQ9BQG0 1328 aaKnown RBP10.54□□□□□ -0.72
LINC00641-201ENST00000555379 MAP3K1Q13233 1512 aa10.54□□□□□ -0.72
LINC00641-201ENST00000555379 WDR97A6NE52 1622 aa10.53□□□□□ -0.72
LINC00641-201ENST00000555379 DDX58O95786 925 aaKnown RBP10.53□□□□□ -0.72
LINC00641-201ENST00000555379 MEX3CQ5U5Q3 659 aaKnown RBP10.53□□□□□ -0.72
LINC00641-201ENST00000555379 CSPP1Q1MSJ5 1256 aa10.53□□□□□ -0.72
LINC00641-201ENST00000555379 SMG6Q86US8 1419 aaKnown RBP10.53□□□□□ -0.72
LINC00641-201ENST00000555379 BICRAQ9NZM4 1560 aa10.53□□□□□ -0.72
LINC00641-201ENST00000555379 CENPJQ9HC77 1338 aaPredicted RBP10.53□□□□□ -0.72
LINC00641-201ENST00000555379 NEUROD2Q15784 382 aa10.52□□□□□ -0.72
LINC00641-201ENST00000555379 PLEKHG5O94827 1062 aa10.52□□□□□ -0.73
LINC00641-201ENST00000555379 GORABQ5T7V8 394 aa10.52□□□□□ -0.73
LINC00641-201ENST00000555379 CCDC141Q6ZP82 1450 aa10.52□□□□□ -0.73
LINC00641-201ENST00000555379 NEXNQ0ZGT2 675 aa10.52□□□□□ -0.73
LINC00641-201ENST00000555379 TTC5Q8N0Z6 440 aa10.52□□□□□ -0.73
LINC00641-201ENST00000555379 UBE2Q2Q8WVN8 375 aa10.52□□□□□ -0.73
LINC00641-201ENST00000555379 AMOTL1Q8IY63 956 aa10.51□□□□□ -0.73
LINC00641-201ENST00000555379 FRAT1Q92837 279 aaPredicted RBP10.51□□□□□ -0.73
LINC00641-201ENST00000555379 HSCBQ8IWL3 235 aa10.51□□□□□ -0.73
LINC00641-201ENST00000555379 DNTTIP2Q5QJE6 756 aaKnown RBP10.51□□□□□ -0.73
LINC00641-201ENST00000555379 CNTLNQ9NXG0 1405 aa10.51□□□□□ -0.73
LINC00641-201ENST00000555379 GOLGA6L4A6NEF3 574 aa10.51□□□□□ -0.73
LINC00641-201ENST00000555379 AKNAQ7Z591 1439 aa10.5□□□□□ -0.73
LINC00641-201ENST00000555379 KIF14Q15058 1648 aa10.5□□□□□ -0.73
LINC00641-201ENST00000555379 ZNF692Q9BU19 519 aaPredicted RBP10.5□□□□□ -0.73
LINC00641-201ENST00000555379 TEFQ10587 303 aa10.5□□□□□ -0.73
LINC00641-201ENST00000555379 L3MBTL2Q969R5 705 aa10.5□□□□□ -0.73
LINC00641-201ENST00000555379 GTF2E1P29083 439 aaPredicted RBP10.5□□□□□ -0.73
LINC00641-201ENST00000555379 SAFB2Q14151 953 aaKnown RBP eCLIP10.5□□□□□ -0.73
LINC00641-201ENST00000555379 NOL10Q9BSC4 688 aaKnown RBP10.5□□□□□ -0.73
LINC00641-201ENST00000555379 THOC2Q8NI27 1593 aaKnown RBP10.49□□□□□ -0.73
LINC00641-201ENST00000555379 GRIN2AQ12879 1464 aa10.49□□□□□ -0.73
LINC00641-201ENST00000555379 CHAF1AQ13111 956 aaPredicted RBP10.49□□□□□ -0.73
LINC00641-201ENST00000555379 ANKLE2Q86XL3 938 aa10.49□□□□□ -0.73
LINC00641-201ENST00000555379 MIER1Q8N108 512 aa10.49□□□□□ -0.73
LINC00641-201ENST00000555379 C9orf84Q5VXU9 1444 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms