RNA–Protein interactions for RNA: ENST00000554819.5

SCFD1-214, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 608 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-214ENST00000554819 C6orf132Q5T0Z8 1188 aa9.61□□□□□ -0.87
SCFD1-214ENST00000554819 POTEBQ6S5H4 581 aa9.61□□□□□ -0.87
SCFD1-214ENST00000554819 ARHGAP33O14559 1287 aa9.6□□□□□ -0.87
SCFD1-214ENST00000554819 RBM26Q5T8P6 1007 aaKnown RBP9.6□□□□□ -0.87
SCFD1-214ENST00000554819 LMOD2Q6P5Q4 547 aa9.59□□□□□ -0.87
SCFD1-214ENST00000554819 NUTM2FA1L443 756 aa9.58□□□□□ -0.88
SCFD1-214ENST00000554819 PRIM1P49642 420 aaKnown RBP9.58□□□□□ -0.88
SCFD1-214ENST00000554819 CERKQ8TCT0 537 aa9.58□□□□□ -0.88
SCFD1-214ENST00000554819 TSR1Q2NL82 804 aaKnown RBP9.57□□□□□ -0.88
SCFD1-214ENST00000554819 KCNK17Q96T54 332 aa9.57□□□□□ -0.88
SCFD1-214ENST00000554819 GPIHBP1Q8IV16 184 aa9.56□□□□□ -0.88
SCFD1-214ENST00000554819 PPP1R3GB7ZBB8 358 aa9.55□□□□□ -0.88
SCFD1-214ENST00000554819 FCHSD2O94868 740 aa9.54□□□□□ -0.88
SCFD1-214ENST00000554819 PSEN2P49810 448 aa9.54□□□□□ -0.88
SCFD1-214ENST00000554819 POTEEQ6S8J3 1075 aa9.54□□□□□ -0.88
SCFD1-214ENST00000554819 CDAN1Q8IWY9 1227 aa9.54□□□□□ -0.88
SCFD1-214ENST00000554819 AXIN2Q9Y2T1 843 aa9.54□□□□□ -0.88
SCFD1-214ENST00000554819 PTGDRQ13258 359 aa9.53□□□□□ -0.88
SCFD1-214ENST00000554819 CDHR5Q9HBB8 845 aa9.52□□□□□ -0.89
SCFD1-214ENST00000554819 COL9A1P20849 921 aa9.51□□□□□ -0.89
SCFD1-214ENST00000554819 NPDC1Q9NQX5 325 aaPredicted RBP9.51□□□□□ -0.89
SCFD1-214ENST00000554819 HIC1Q14526 733 aa9.5□□□□□ -0.89
SCFD1-214ENST00000554819 SLC4A5Q9BY07 1137 aa9.5□□□□□ -0.89
SCFD1-214ENST00000554819 LSM11P83369 360 aaKnown RBP eCLIP9.49□□□□□ -0.89
SCFD1-214ENST00000554819 DMRTA1Q5VZB9 504 aa9.49□□□□□ -0.89
SCFD1-214ENST00000554819 RBM27Q9P2N5 1060 aaKnown RBP9.49□□□□□ -0.89
SCFD1-214ENST00000554819 TK2O00142 265 aa9.48□□□□□ -0.89
SCFD1-214ENST00000554819 ONECUT3O60422 494 aaPredicted RBP9.48□□□□□ -0.89
SCFD1-214ENST00000554819 PRSS12P56730 875 aa9.48□□□□□ -0.89
SCFD1-214ENST00000554819 ZBED2Q9BTP6 218 aa9.48□□□□□ -0.89
SCFD1-214ENST00000554819 GNPATO15228 680 aa9.47□□□□□ -0.89
SCFD1-214ENST00000554819 ANKRD13DQ6ZTN6 518 aa9.47□□□□□ -0.89
SCFD1-214ENST00000554819 ZC3H15Q8WU90 426 aaKnown RBP9.47□□□□□ -0.89
SCFD1-214ENST00000554819 CDCA7LQ96GN5 454 aa9.47□□□□□ -0.89
SCFD1-214ENST00000554819 KRTAP3-3Q9BYR6 98 aa9.46□□□□□ -0.9
SCFD1-214ENST00000554819 KRTAP3-2Q9BYR7 98 aa9.46□□□□□ -0.9
SCFD1-214ENST00000554819 TRIM6-TRIM34B2RNG4 842 aa9.45□□□□□ -0.9
SCFD1-214ENST00000554819 GPR37O15354 613 aa9.45□□□□□ -0.9
SCFD1-214ENST00000554819 PACS2Q86VP3 889 aa9.45□□□□□ -0.9
SCFD1-214ENST00000554819 VPS9D1Q9Y2B5 631 aa9.45□□□□□ -0.9
SCFD1-214ENST00000554819 ADGRD1Q6QNK2 874 aa9.44□□□□□ -0.9
SCFD1-214ENST00000554819 PROX2Q3B8N5 592 aa9.43□□□□□ -0.9
SCFD1-214ENST00000554819 PADI6Q6TGC4 694 aa9.43□□□□□ -0.9
SCFD1-214ENST00000554819 RABGEF1Q9UJ41 708 aa9.43□□□□□ -0.9
SCFD1-214ENST00000554819 ZMYND10O75800 440 aa9.42□□□□□ -0.9
SCFD1-214ENST00000554819 TTC13Q8NBP0 860 aa9.42□□□□□ -0.9
SCFD1-214ENST00000554819 STAC3Q96MF2 364 aa9.42□□□□□ -0.9
SCFD1-214ENST00000554819 KIAA1468Q9P260 1216 aa9.41□□□□□ -0.9
SCFD1-214ENST00000554819 TSKSQ9UJT2 592 aa9.41□□□□□ -0.9
SCFD1-214ENST00000554819 BARGINQ6ZT62 677 aa9.4□□□□□ -0.9
SCFD1-214ENST00000554819 KRI1Q8N9T8 703 aaKnown RBP9.4□□□□□ -0.9
SCFD1-214ENST00000554819 NBPF3Q9H094 633 aa9.4□□□□□ -0.9
SCFD1-214ENST00000554819 MINK1Q8N4C8 1332 aaPredicted RBP9.39□□□□□ -0.91
SCFD1-214ENST00000554819 NBPF26B4DH59 902 aa9.39□□□□□ -0.91
SCFD1-214ENST00000554819 FECHP22830 423 aa9.39□□□□□ -0.91
SCFD1-214ENST00000554819 MAP2K5Q13163 448 aa9.38□□□□□ -0.91
SCFD1-214ENST00000554819 BHMG1C9JSJ3 638 aaPredicted RBP9.37□□□□□ -0.91
SCFD1-214ENST00000554819 HRO43593 1189 aa9.37□□□□□ -0.91
SCFD1-214ENST00000554819 OATP04181 439 aa9.37□□□□□ -0.91
SCFD1-214ENST00000554819 TPRNQ4KMQ1 711 aa9.37□□□□□ -0.91
SCFD1-214ENST00000554819 TATDN2Q93075 761 aa9.37□□□□□ -0.91
SCFD1-214ENST00000554819 FAM198AQ9UFP1 575 aa9.37□□□□□ -0.91
SCFD1-214ENST00000554819 PNMA3Q9UL41 463 aa9.37□□□□□ -0.91
SCFD1-214ENST00000554819 IRF6O14896 467 aa9.36□□□□□ -0.91
SCFD1-214ENST00000554819 NUDT18Q6ZVK8 323 aa9.36□□□□□ -0.91
SCFD1-214ENST00000554819 LAPTM4BQ86VI4 370 aa9.36□□□□□ -0.91
SCFD1-214ENST00000554819 MRPL50Q8N5N7 158 aaKnown RBP9.36□□□□□ -0.91
SCFD1-214ENST00000554819 RBM46Q8TBY0 533 aaKnown RBP9.36□□□□□ -0.91
SCFD1-214ENST00000554819 ADGRG1Q9Y653 693 aa9.35□□□□□ -0.91
SCFD1-214ENST00000554819 FAM98CQ17RN3 349 aaKnown RBP9.33□□□□□ -0.92
SCFD1-214ENST00000554819 GOLGA8CPA6NN73 597 aa9.32□□□□□ -0.92
SCFD1-214ENST00000554819 EYA1Q99502 592 aa9.32□□□□□ -0.92
SCFD1-214ENST00000554819 SMAPO00193 183 aa9.31□□□□□ -0.92
SCFD1-214ENST00000554819 HDGFP51858 240 aaKnown RBP9.31□□□□□ -0.92
SCFD1-214ENST00000554819 FAM161AQ3B820 660 aa9.31□□□□□ -0.92
SCFD1-214ENST00000554819 AK7Q96M32 723 aa9.31□□□□□ -0.92
SCFD1-214ENST00000554819 SEPT9Q9UHD8 586 aaPredicted RBP9.31□□□□□ -0.92
SCFD1-214ENST00000554819 MMRN1Q13201 1228 aa9.3□□□□□ -0.92
SCFD1-214ENST00000554819 METTL3Q86U44 580 aaKnown RBP9.3□□□□□ -0.92
SCFD1-214ENST00000554819 PXYLP1Q8TE99 480 aa9.3□□□□□ -0.92
SCFD1-214ENST00000554819 CCDC102AQ96A19 550 aa9.3□□□□□ -0.92
SCFD1-214ENST00000554819 SLC24A3Q9HC58 644 aa9.3□□□□□ -0.92
SCFD1-214ENST00000554819 C3orf80F5H4A9 247 aa9.29□□□□□ -0.92
SCFD1-214ENST00000554819 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.28□□□□□ -0.92
SCFD1-214ENST00000554819 DNAJB2P25686 324 aa9.28□□□□□ -0.92
SCFD1-214ENST00000554819 SPNS2Q8IVW8 549 aa9.28□□□□□ -0.92
SCFD1-214ENST00000554819 ZFRQ96KR1 1074 aaKnown RBP9.28□□□□□ -0.92
SCFD1-214ENST00000554819 MYT1LQ9UL68 1186 aa9.27□□□□□ -0.93
SCFD1-214ENST00000554819 RCCD1A6NED2 376 aa9.26□□□□□ -0.93
SCFD1-214ENST00000554819 SLC4A3P48751 1232 aa9.26□□□□□ -0.93
SCFD1-214ENST00000554819 ANKK1Q8NFD2 765 aa9.25□□□□□ -0.93
SCFD1-214ENST00000554819 WNT2BQ93097 391 aa9.25□□□□□ -0.93
SCFD1-214ENST00000554819 PRKCSHP14314 528 aaPredicted RBP9.24□□□□□ -0.93
SCFD1-214ENST00000554819 TRIM66O15016 1216 aa9.23□□□□□ -0.93
SCFD1-214ENST00000554819 LRCH3Q96II8 777 aa9.23□□□□□ -0.93
SCFD1-214ENST00000554819 PHOX2BQ99453 314 aa9.23□□□□□ -0.93
SCFD1-214ENST00000554819 TMEM134Q9H6X4 195 aa9.23□□□□□ -0.93
SCFD1-214ENST00000554819 SAMD7Q7Z3H4 446 aa9.22□□□□□ -0.93
SCFD1-214ENST00000554819 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.22□□□□□ -0.93
SCFD1-214ENST00000554819 CLCN1P35523 988 aa9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 109.2 ms