RNA–Protein interactions for RNA: ENST00000554636.1

VTI1B-203, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 3

Gene VTI1B, Length 565 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-203ENST00000554636 PTPREP23469 700 aa8.51□□□□□ -1.05
VTI1B-203ENST00000554636 TYW1BQ6NUM6 668 aa8.51□□□□□ -1.05
VTI1B-203ENST00000554636 UNC13AQ9UPW8 1703 aa8.51□□□□□ -1.05
VTI1B-203ENST00000554636 SPDYE16A6NNV3 312 aaPredicted RBP8.5□□□□□ -1.05
VTI1B-203ENST00000554636 ADGRD1Q6QNK2 874 aa8.5□□□□□ -1.05
VTI1B-203ENST00000554636 FBXW7Q969H0 707 aa8.48□□□□□ -1.05
VTI1B-203ENST00000554636 KDM2AQ9Y2K7 1162 aa8.48□□□□□ -1.05
VTI1B-203ENST00000554636 ARIH1Q9Y4X5 557 aaPredicted RBP8.48□□□□□ -1.05
VTI1B-203ENST00000554636 PTGER2P43116 358 aa8.47□□□□□ -1.05
VTI1B-203ENST00000554636 EPAS1Q99814 870 aa8.47□□□□□ -1.05
VTI1B-203ENST00000554636 MYT1LQ9UL68 1186 aa8.47□□□□□ -1.05
VTI1B-203ENST00000554636 MAP3K7O43318 606 aa8.46□□□□□ -1.06
VTI1B-203ENST00000554636 COL9A1P20849 921 aa8.46□□□□□ -1.06
VTI1B-203ENST00000554636 P3H3Q8IVL6 736 aa8.46□□□□□ -1.06
VTI1B-203ENST00000554636 ARHGEF1Q92888 912 aaKnown RBP8.46□□□□□ -1.06
VTI1B-203ENST00000554636 TSR1Q2NL82 804 aaKnown RBP8.45□□□□□ -1.06
VTI1B-203ENST00000554636 RNF166Q96A37 237 aaPredicted RBP8.45□□□□□ -1.06
VTI1B-203ENST00000554636 BICRAQ9NZM4 1560 aa8.44□□□□□ -1.06
VTI1B-203ENST00000554636 MLLT3P42568 568 aaPredicted RBP8.44□□□□□ -1.06
VTI1B-203ENST00000554636 PRIM1P49642 420 aaKnown RBP8.44□□□□□ -1.06
VTI1B-203ENST00000554636 C6orf132Q5T0Z8 1188 aa8.44□□□□□ -1.06
VTI1B-203ENST00000554636 VPS9D1Q9Y2B5 631 aa8.44□□□□□ -1.06
VTI1B-203ENST00000554636 PPP1R3GB7ZBB8 358 aa8.43□□□□□ -1.06
VTI1B-203ENST00000554636 EN1Q05925 392 aaPredicted RBP8.43□□□□□ -1.06
VTI1B-203ENST00000554636 PROX2Q3B8N5 592 aa8.43□□□□□ -1.06
VTI1B-203ENST00000554636 STAC3Q96MF2 364 aa8.43□□□□□ -1.06
VTI1B-203ENST00000554636 ZBED2Q9BTP6 218 aa8.43□□□□□ -1.06
VTI1B-203ENST00000554636 TK2O00142 265 aa8.42□□□□□ -1.06
VTI1B-203ENST00000554636 SEMA3EO15041 775 aa8.4□□□□□ -1.06
VTI1B-203ENST00000554636 HRO43593 1189 aa8.4□□□□□ -1.06
VTI1B-203ENST00000554636 OSBPP22059 807 aa8.4□□□□□ -1.06
VTI1B-203ENST00000554636 CDHR5Q9HBB8 845 aa8.4□□□□□ -1.06
VTI1B-203ENST00000554636 VSIG10Q8N0Z9 540 aa8.39□□□□□ -1.07
VTI1B-203ENST00000554636 SCRIBQ14160 1630 aa8.36□□□□□ -1.07
VTI1B-203ENST00000554636 KCTD12Q96CX2 325 aaKnown RBP8.36□□□□□ -1.07
VTI1B-203ENST00000554636 SLC4A5Q9BY07 1137 aa8.36□□□□□ -1.07
VTI1B-203ENST00000554636 GOLGA8CPA6NN73 597 aa8.35□□□□□ -1.07
VTI1B-203ENST00000554636 MRPL50Q8N5N7 158 aaKnown RBP8.35□□□□□ -1.07
VTI1B-203ENST00000554636 KIAA1468Q9P260 1216 aa8.35□□□□□ -1.07
VTI1B-203ENST00000554636 SHROOM4Q9ULL8 1493 aa8.34□□□□□ -1.07
VTI1B-203ENST00000554636 NBPF3Q9H094 633 aa8.34□□□□□ -1.07
VTI1B-203ENST00000554636 SEPT9Q9UHD8 586 aaPredicted RBP8.34□□□□□ -1.07
VTI1B-203ENST00000554636 TRIM6-TRIM34B2RNG4 842 aa8.33□□□□□ -1.08
VTI1B-203ENST00000554636 BHMG1C9JSJ3 638 aaPredicted RBP8.33□□□□□ -1.08
VTI1B-203ENST00000554636 RABGEF1Q9UJ41 708 aa8.33□□□□□ -1.08
VTI1B-203ENST00000554636 TSKSQ9UJT2 592 aa8.32□□□□□ -1.08
VTI1B-203ENST00000554636 NUTM2FA1L443 756 aa8.31□□□□□ -1.08
VTI1B-203ENST00000554636 CDCA7LQ96GN5 454 aa8.31□□□□□ -1.08
VTI1B-203ENST00000554636 SMAPO00193 183 aa8.3□□□□□ -1.08
VTI1B-203ENST00000554636 PRSS12P56730 875 aa8.3□□□□□ -1.08
VTI1B-203ENST00000554636 WNT2BQ93097 391 aa8.3□□□□□ -1.08
VTI1B-203ENST00000554636 TESPA1A2RU30 521 aaPredicted RBP8.29□□□□□ -1.08
VTI1B-203ENST00000554636 PTPN5P54829 565 aa8.29□□□□□ -1.08
VTI1B-203ENST00000554636 RBM26Q5T8P6 1007 aaKnown RBP8.29□□□□□ -1.08
VTI1B-203ENST00000554636 PADI6Q6TGC4 694 aa8.28□□□□□ -1.08
VTI1B-203ENST00000554636 PACS2Q86VP3 889 aa8.28□□□□□ -1.08
VTI1B-203ENST00000554636 CERKQ8TCT0 537 aa8.28□□□□□ -1.08
VTI1B-203ENST00000554636 FAM198AQ9UFP1 575 aa8.28□□□□□ -1.08
VTI1B-203ENST00000554636 C3orf80F5H4A9 247 aa8.27□□□□□ -1.09
VTI1B-203ENST00000554636 NPDC1Q9NQX5 325 aaPredicted RBP8.27□□□□□ -1.09
VTI1B-203ENST00000554636 PNMA3Q9UL41 463 aa8.26□□□□□ -1.09
VTI1B-203ENST00000554636 ONECUT3O60422 494 aaPredicted RBP8.25□□□□□ -1.09
VTI1B-203ENST00000554636 BCAMP50895 628 aa8.25□□□□□ -1.09
VTI1B-203ENST00000554636 THSD4Q6ZMP0 1018 aa8.25□□□□□ -1.09
VTI1B-203ENST00000554636 ANKK1Q8NFD2 765 aa8.25□□□□□ -1.09
VTI1B-203ENST00000554636 ZFRQ96KR1 1074 aaKnown RBP8.25□□□□□ -1.09
VTI1B-203ENST00000554636 HCSTQ9UBK5 93 aa8.25□□□□□ -1.09
VTI1B-203ENST00000554636 NBPF26B4DH59 902 aa8.24□□□□□ -1.09
VTI1B-203ENST00000554636 PTGDRQ13258 359 aa8.24□□□□□ -1.09
VTI1B-203ENST00000554636 FAM98CQ17RN3 349 aaKnown RBP8.24□□□□□ -1.09
VTI1B-203ENST00000554636 SMYD5Q6GMV2 418 aa8.24□□□□□ -1.09
VTI1B-203ENST00000554636 NUDT18Q6ZVK8 323 aa8.24□□□□□ -1.09
VTI1B-203ENST00000554636 LAPTM4BQ86VI4 370 aa8.23□□□□□ -1.09
VTI1B-203ENST00000554636 TATDN2Q93075 761 aa8.23□□□□□ -1.09
VTI1B-203ENST00000554636 FCHSD2O94868 740 aa8.21□□□□□ -1.1
VTI1B-203ENST00000554636 FAM161AQ3B820 660 aa8.21□□□□□ -1.1
VTI1B-203ENST00000554636 RBM27Q9P2N5 1060 aaKnown RBP8.21□□□□□ -1.1
VTI1B-203ENST00000554636 EIF4G1Q04637 1599 aaKnown RBP8.21□□□□□ -1.1
VTI1B-203ENST00000554636 RNF40O75150 1001 aa8.2□□□□□ -1.1
VTI1B-203ENST00000554636 CC2D2AQ9P2K1 1620 aa8.19□□□□□ -1.1
VTI1B-203ENST00000554636 SOWAHBA6NEL2 793 aa8.19□□□□□ -1.1
VTI1B-203ENST00000554636 SAMD7Q7Z3H4 446 aa8.19□□□□□ -1.1
VTI1B-203ENST00000554636 GPIHBP1Q8IV16 184 aa8.19□□□□□ -1.1
VTI1B-203ENST00000554636 LRCH3Q96II8 777 aa8.19□□□□□ -1.1
VTI1B-203ENST00000554636 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.19□□□□□ -1.1
VTI1B-203ENST00000554636 TTC13Q8NBP0 860 aa8.18□□□□□ -1.1
VTI1B-203ENST00000554636 HPS5Q9UPZ3 1129 aa8.18□□□□□ -1.1
VTI1B-203ENST00000554636 TULP1O00294 542 aaPredicted RBP8.17□□□□□ -1.1
VTI1B-203ENST00000554636 WBP1LQ9NX94 342 aa8.17□□□□□ -1.1
VTI1B-203ENST00000554636 FECHP22830 423 aa8.15□□□□□ -1.1
VTI1B-203ENST00000554636 PLA2G2EQ9NZK7 142 aa8.15□□□□□ -1.1
VTI1B-203ENST00000554636 GPR37O15354 613 aa8.14□□□□□ -1.11
VTI1B-203ENST00000554636 HIC1Q14526 733 aa8.14□□□□□ -1.11
VTI1B-203ENST00000554636 SWT1Q5T5J6 900 aaKnown RBP8.14□□□□□ -1.11
VTI1B-203ENST00000554636 ADGRG1Q9Y653 693 aa8.14□□□□□ -1.11
VTI1B-203ENST00000554636 CECR2Q9BXF3 1484 aa8.13□□□□□ -1.11
VTI1B-203ENST00000554636 GNPATO15228 680 aa8.13□□□□□ -1.11
VTI1B-203ENST00000554636 RBM46Q8TBY0 533 aaKnown RBP8.13□□□□□ -1.11
VTI1B-203ENST00000554636 EYA1Q99502 592 aa8.13□□□□□ -1.11
VTI1B-203ENST00000554636 HDGFP51858 240 aaKnown RBP8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms