RNA–Protein interactions for RNA: ENST00000554062.5

PABPN1-204, Transcript of poly(A) binding protein nuclear 1, humanhuman

TSL 3

Gene PABPN1, Length 589 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-204ENST00000554062 SH3D19Q5HYK7 790 aa8.67□□□□□ -1.02
PABPN1-204ENST00000554062 OATP04181 439 aa8.66□□□□□ -1.02
PABPN1-204ENST00000554062 FECHP22830 423 aa8.66□□□□□ -1.02
PABPN1-204ENST00000554062 JPH4Q96JJ6 628 aa8.66□□□□□ -1.02
PABPN1-204ENST00000554062 COLQQ9Y215 455 aaPredicted RBP8.66□□□□□ -1.02
PABPN1-204ENST00000554062 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.65□□□□□ -1.02
PABPN1-204ENST00000554062 RBM27Q9P2N5 1060 aaKnown RBP8.65□□□□□ -1.02
PABPN1-204ENST00000554062 METRNQ9UJH8 293 aa8.65□□□□□ -1.02
PABPN1-204ENST00000554062 DIXDC1Q155Q3 683 aa8.63□□□□□ -1.03
PABPN1-204ENST00000554062 MS4A1P11836 297 aa8.62□□□□□ -1.03
PABPN1-204ENST00000554062 PRIM1P49642 420 aaKnown RBP8.62□□□□□ -1.03
PABPN1-204ENST00000554062 A6NJR5 290 aa8.61□□□□□ -1.03
PABPN1-204ENST00000554062 TMUB1Q9BVT8 246 aa8.61□□□□□ -1.03
PABPN1-204ENST00000554062 NPDC1Q9NQX5 325 aaPredicted RBP8.61□□□□□ -1.03
PABPN1-204ENST00000554062 PCDHGA4Q9Y5G9 962 aa8.61□□□□□ -1.03
PABPN1-204ENST00000554062 PCDHGA10Q9Y5H3 936 aa8.61□□□□□ -1.03
PABPN1-204ENST00000554062 MDM2Q00987 491 aaPredicted RBP8.6□□□□□ -1.03
PABPN1-204ENST00000554062 SKIV2LQ15477 1246 aaKnown RBP8.6□□□□□ -1.03
PABPN1-204ENST00000554062 CDHR5Q9HBB8 845 aa8.6□□□□□ -1.03
PABPN1-204ENST00000554062 RIMBP2O15034 1052 aa8.59□□□□□ -1.03
PABPN1-204ENST00000554062 ONECUT3O60422 494 aaPredicted RBP8.59□□□□□ -1.03
PABPN1-204ENST00000554062 PELP1Q8IZL8 1130 aaKnown RBP8.59□□□□□ -1.03
PABPN1-204ENST00000554062 RBM33Q96EV2 1170 aaKnown RBP8.59□□□□□ -1.03
PABPN1-204ENST00000554062 UBTFP17480 764 aaKnown RBP8.58□□□□□ -1.04
PABPN1-204ENST00000554062 SSTR3P32745 418 aaPredicted RBP8.58□□□□□ -1.04
PABPN1-204ENST00000554062 METTL3Q86U44 580 aaKnown RBP8.58□□□□□ -1.04
PABPN1-204ENST00000554062 FOSBP53539 338 aa8.57□□□□□ -1.04
PABPN1-204ENST00000554062 RBM46Q8TBY0 533 aaKnown RBP8.56□□□□□ -1.04
PABPN1-204ENST00000554062 ZDHHC16Q969W1 377 aa8.56□□□□□ -1.04
PABPN1-204ENST00000554062 BEGAINQ9BUH8 593 aa8.56□□□□□ -1.04
PABPN1-204ENST00000554062 ZSWIM6Q9HCJ5 1215 aa8.56□□□□□ -1.04
PABPN1-204ENST00000554062 FAM217BQ9NTX9 383 aaPredicted RBP8.56□□□□□ -1.04
PABPN1-204ENST00000554062 PSDA5PKW4 1024 aaPredicted RBP8.55□□□□□ -1.04
PABPN1-204ENST00000554062 RAD21O60216 631 aa8.55□□□□□ -1.04
PABPN1-204ENST00000554062 MCM6Q14566 821 aa8.55□□□□□ -1.04
PABPN1-204ENST00000554062 DOK7Q18PE1 504 aa8.55□□□□□ -1.04
PABPN1-204ENST00000554062 TSR1Q2NL82 804 aaKnown RBP8.55□□□□□ -1.04
PABPN1-204ENST00000554062 POTEFA5A3E0 1075 aa8.54□□□□□ -1.04
PABPN1-204ENST00000554062 C6orf132Q5T0Z8 1188 aa8.54□□□□□ -1.04
PABPN1-204ENST00000554062 PXYLP1Q8TE99 480 aa8.54□□□□□ -1.04
PABPN1-204ENST00000554062 ATP1B4Q9UN42 357 aaPredicted RBP8.54□□□□□ -1.04
PABPN1-204ENST00000554062 ADGRG1Q9Y653 693 aa8.54□□□□□ -1.04
PABPN1-204ENST00000554062 REPIN1Q9BWE0 567 aaKnown RBP8.53□□□□□ -1.04
PABPN1-204ENST00000554062 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.52□□□□□ -1.05
PABPN1-204ENST00000554062 POTEB2H3BUK9 544 aa8.52□□□□□ -1.05
PABPN1-204ENST00000554062 APBB1O00213 710 aa8.52□□□□□ -1.05
PABPN1-204ENST00000554062 PADI6Q6TGC4 694 aa8.52□□□□□ -1.05
PABPN1-204ENST00000554062 ZNF454Q8N9F8 522 aa8.52□□□□□ -1.05
PABPN1-204ENST00000554062 TTC13Q8NBP0 860 aa8.52□□□□□ -1.05
PABPN1-204ENST00000554062 KDM4FA0A1W2PPD8 638 aa8.51□□□□□ -1.05
PABPN1-204ENST00000554062 SPDYE5A6NIY4 337 aa8.51□□□□□ -1.05
PABPN1-204ENST00000554062 SULF1Q8IWU6 871 aa8.51□□□□□ -1.05
PABPN1-204ENST00000554062 BANK1Q8NDB2 785 aa8.51□□□□□ -1.05
PABPN1-204ENST00000554062 TRAK2O60296 914 aa8.5□□□□□ -1.05
PABPN1-204ENST00000554062 CLK2P49760 499 aaKnown RBP8.5□□□□□ -1.05
PABPN1-204ENST00000554062 PRSS12P56730 875 aa8.5□□□□□ -1.05
PABPN1-204ENST00000554062 WWC1Q8IX03 1113 aa8.49□□□□□ -1.05
PABPN1-204ENST00000554062 OTUD5Q96G74 571 aa8.49□□□□□ -1.05
PABPN1-204ENST00000554062 PHOX2BQ99453 314 aa8.49□□□□□ -1.05
PABPN1-204ENST00000554062 TMEM259Q4ZIN3 620 aa8.48□□□□□ -1.05
PABPN1-204ENST00000554062 MYSM1Q5VVJ2 828 aa8.48□□□□□ -1.05
PABPN1-204ENST00000554062 PROSER2Q86WR7 435 aaPredicted RBP8.48□□□□□ -1.05
PABPN1-204ENST00000554062 SOCS7O14512 581 aa8.47□□□□□ -1.05
PABPN1-204ENST00000554062 TUSC1Q2TAM9 212 aa8.47□□□□□ -1.05
PABPN1-204ENST00000554062 PPP4R3BQ5MIZ7 849 aa8.47□□□□□ -1.05
PABPN1-204ENST00000554062 CDCA7LQ96GN5 454 aa8.47□□□□□ -1.05
PABPN1-204ENST00000554062 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.47□□□□□ -1.05
PABPN1-204ENST00000554062 PRM3Q9NNZ6 103 aa8.47□□□□□ -1.05
PABPN1-204ENST00000554062 ARID3AQ99856 593 aa8.46□□□□□ -1.06
PABPN1-204ENST00000554062 NBPF26B4DH59 902 aa8.45□□□□□ -1.06
PABPN1-204ENST00000554062 GJA5P36382 358 aa8.45□□□□□ -1.06
PABPN1-204ENST00000554062 TBC1D2Q9BYX2 928 aa8.45□□□□□ -1.06
PABPN1-204ENST00000554062 ZNF710Q8N1W2 664 aa8.44□□□□□ -1.06
PABPN1-204ENST00000554062 CCDC97Q96F63 343 aaPredicted RBP8.44□□□□□ -1.06
PABPN1-204ENST00000554062 C1orf115Q9H7X2 142 aa8.44□□□□□ -1.06
PABPN1-204ENST00000554062 POLR3EQ9NVU0 708 aa8.44□□□□□ -1.06
PABPN1-204ENST00000554062 SERPINA10Q9UK55 444 aa8.44□□□□□ -1.06
PABPN1-204ENST00000554062 NUDT7P0C024 238 aa8.43□□□□□ -1.06
PABPN1-204ENST00000554062 DNAJB2P25686 324 aa8.43□□□□□ -1.06
PABPN1-204ENST00000554062 MAMSTRQ6ZN01 415 aa8.43□□□□□ -1.06
PABPN1-204ENST00000554062 CLUAP1Q96AJ1 413 aa8.43□□□□□ -1.06
PABPN1-204ENST00000554062 KCNH8Q96L42 1107 aa8.43□□□□□ -1.06
PABPN1-204ENST00000554062 ADAM33Q9BZ11 813 aa8.43□□□□□ -1.06
PABPN1-204ENST00000554062 ARID3CA6NKF2 412 aa8.42□□□□□ -1.06
PABPN1-204ENST00000554062 PPP1R3GB7ZBB8 358 aa8.42□□□□□ -1.06
PABPN1-204ENST00000554062 PTPREP23469 700 aa8.42□□□□□ -1.06
PABPN1-204ENST00000554062 RSPH4AQ5TD94 716 aa8.42□□□□□ -1.06
PABPN1-204ENST00000554062 PPP2R2DQ66LE6 453 aa8.42□□□□□ -1.06
PABPN1-204ENST00000554062 NUTM1Q86Y26 1132 aa8.42□□□□□ -1.06
PABPN1-204ENST00000554062 BCL2L12Q9HB09 334 aa8.42□□□□□ -1.06
PABPN1-204ENST00000554062 RFC5P40937 340 aa8.41□□□□□ -1.06
PABPN1-204ENST00000554062 FAM161AQ3B820 660 aa8.41□□□□□ -1.06
PABPN1-204ENST00000554062 CCDC82Q8N4S0 544 aa8.41□□□□□ -1.06
PABPN1-204ENST00000554062 PROCA1Q8NCQ7 364 aaPredicted RBP8.41□□□□□ -1.06
PABPN1-204ENST00000554062 PODXL2Q9NZ53 605 aa8.41□□□□□ -1.06
PABPN1-204ENST00000554062 RCCD1A6NED2 376 aa8.4□□□□□ -1.06
PABPN1-204ENST00000554062 PDIA4P13667 645 aaKnown RBP8.4□□□□□ -1.06
PABPN1-204ENST00000554062 PACS2Q86VP3 889 aa8.4□□□□□ -1.06
PABPN1-204ENST00000554062 SCUBE2Q9NQ36 999 aa8.4□□□□□ -1.06
PABPN1-204ENST00000554062 SNPHO15079 494 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms