RNA–Protein interactions for RNA: ENST00000553578.5

RDH11-204, Transcript of retinol dehydrogenase 11, humanhuman

TSL 1 (best)

Gene RDH11, Length 4,035 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDH11-204ENST00000553578 LHX8Q68G74 356 aa5.94□□□□□ -1.46
RDH11-204ENST00000553578 ADAMTS12P58397 1594 aa5.93□□□□□ -1.46
RDH11-204ENST00000553578 GTPBP6O43824 516 aaPredicted RBP5.93□□□□□ -1.46
RDH11-204ENST00000553578 CEP162Q5TB80 1403 aa5.93□□□□□ -1.46
RDH11-204ENST00000553578 RAPGEF2Q9Y4G8 1499 aa5.93□□□□□ -1.46
RDH11-204ENST00000553578 CUX2O14529 1486 aa5.93□□□□□ -1.46
RDH11-204ENST00000553578 MS4A4AQ96JQ5 239 aa5.92□□□□□ -1.46
RDH11-204ENST00000553578 ARAP1Q96P48 1450 aa5.92□□□□□ -1.46
RDH11-204ENST00000553578 ZBTB7CA1YPR0 619 aa5.91□□□□□ -1.46
RDH11-204ENST00000553578 POTEFA5A3E0 1075 aa5.91□□□□□ -1.46
RDH11-204ENST00000553578 VPS8Q8N3P4 1428 aa5.91□□□□□ -1.46
RDH11-204ENST00000553578 TRIM26Q12899 539 aaPredicted RBP5.91□□□□□ -1.46
RDH11-204ENST00000553578 ILDR1Q86SU0 546 aaPredicted RBP5.91□□□□□ -1.46
RDH11-204ENST00000553578 MICALL2Q8IY33 904 aa5.91□□□□□ -1.46
RDH11-204ENST00000553578 IFT140Q96RY7 1462 aa5.9□□□□□ -1.46
RDH11-204ENST00000553578 NESP48681 1621 aa5.9□□□□□ -1.47
RDH11-204ENST00000553578 UBE2Q2Q8WVN8 375 aa5.9□□□□□ -1.47
RDH11-204ENST00000553578 UGGT2Q9NYU1 1516 aa5.89□□□□□ -1.47
RDH11-204ENST00000553578 PPP1R37O75864 691 aa5.89□□□□□ -1.47
RDH11-204ENST00000553578 TMC2Q8TDI7 906 aa5.89□□□□□ -1.47
RDH11-204ENST00000553578 ARHGEF11O15085 1522 aa5.89□□□□□ -1.47
RDH11-204ENST00000553578 AEBP1Q8IUX7 1158 aa5.89□□□□□ -1.47
RDH11-204ENST00000553578 LRRIQ1Q96JM4 1722 aa5.89□□□□□ -1.47
RDH11-204ENST00000553578 PKNOX2Q96KN3 472 aa5.89□□□□□ -1.47
RDH11-204ENST00000553578 SLAIN1Q8ND83 568 aa5.88□□□□□ -1.47
RDH11-204ENST00000553578 ARHGAP35Q9NRY4 1499 aa5.88□□□□□ -1.47
RDH11-204ENST00000553578 CCDC136Q96JN2 1154 aa5.87□□□□□ -1.47
RDH11-204ENST00000553578 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP5.87□□□□□ -1.47
RDH11-204ENST00000553578 SHROOM2Q13796 1616 aa5.87□□□□□ -1.47
RDH11-204ENST00000553578 POTEB2H3BUK9 544 aa5.86□□□□□ -1.47
RDH11-204ENST00000553578 SNAPC4Q5SXM2 1469 aa5.86□□□□□ -1.47
RDH11-204ENST00000553578 CLIP1P30622 1438 aa5.86□□□□□ -1.47
RDH11-204ENST00000553578 WDR70Q9NW82 654 aa5.86□□□□□ -1.47
RDH11-204ENST00000553578 FYCO1Q9BQS8 1478 aa5.86□□□□□ -1.47
RDH11-204ENST00000553578 EIF4G3O43432 1585 aaKnown RBP5.85□□□□□ -1.47
RDH11-204ENST00000553578 MAGI1Q96QZ7 1491 aaPredicted RBP5.85□□□□□ -1.47
RDH11-204ENST00000553578 TIAM1Q13009 1591 aa5.85□□□□□ -1.47
RDH11-204ENST00000553578 ARID3CA6NKF2 412 aa5.85□□□□□ -1.47
RDH11-204ENST00000553578 PDE4AP27815 886 aa5.85□□□□□ -1.47
RDH11-204ENST00000553578 CDK11BP21127 795 aaKnown RBP5.85□□□□□ -1.47
RDH11-204ENST00000553578 CDK11AQ9UQ88 783 aaPredicted RBP5.85□□□□□ -1.47
RDH11-204ENST00000553578 RRBP1Q9P2E9 1410 aaKnown RBP5.85□□□□□ -1.47
RDH11-204ENST00000553578 TMEM121BQ9BXQ6 578 aaPredicted RBP5.84□□□□□ -1.47
RDH11-204ENST00000553578 ADCY10Q96PN6 1610 aa5.84□□□□□ -1.47
RDH11-204ENST00000553578 FHAD1B1AJZ9 1412 aa5.84□□□□□ -1.47
RDH11-204ENST00000553578 CCDC9Q9Y3X0 531 aaKnown RBP5.84□□□□□ -1.47
RDH11-204ENST00000553578 GAPVD1Q14C86 1478 aa5.84□□□□□ -1.47
RDH11-204ENST00000553578 GRIN2BQ13224 1484 aa5.83□□□□□ -1.48
RDH11-204ENST00000553578 SNPHO15079 494 aa5.83□□□□□ -1.48
RDH11-204ENST00000553578 ZEB1P37275 1124 aaPredicted RBP5.83□□□□□ -1.48
RDH11-204ENST00000553578 USP35Q9P2H5 1018 aa5.83□□□□□ -1.48
RDH11-204ENST00000553578 LOC105371045A0A1W2PR82 267 aa5.82□□□□□ -1.48
RDH11-204ENST00000553578 PDIA4P13667 645 aaKnown RBP5.82□□□□□ -1.48
RDH11-204ENST00000553578 LARP6Q9BRS8 491 aaKnown RBP5.82□□□□□ -1.48
RDH11-204ENST00000553578 CARMIL1Q5VZK9 1371 aa5.82□□□□□ -1.48
RDH11-204ENST00000553578 NUP160Q12769 1436 aa5.82□□□□□ -1.48
RDH11-204ENST00000553578 CASKIN1Q8WXD9 1431 aa5.82□□□□□ -1.48
RDH11-204ENST00000553578 POTEJP0CG39 1038 aa5.82□□□□□ -1.48
RDH11-204ENST00000553578 RAD54L2Q9Y4B4 1467 aa5.82□□□□□ -1.48
RDH11-204ENST00000553578 IQGAP2Q13576 1575 aa5.81□□□□□ -1.48
RDH11-204ENST00000553578 OTUD5Q96G74 571 aa5.81□□□□□ -1.48
RDH11-204ENST00000553578 C2orf72A6NCS6 295 aa5.81□□□□□ -1.48
RDH11-204ENST00000553578 PCF11O94913 1555 aaKnown RBP5.8□□□□□ -1.48
RDH11-204ENST00000553578 RIMBP2O15034 1052 aa5.8□□□□□ -1.48
RDH11-204ENST00000553578 ZNF710Q8N1W2 664 aa5.8□□□□□ -1.48
RDH11-204ENST00000553578 SALL2Q9Y467 1007 aaPredicted RBP5.8□□□□□ -1.48
RDH11-204ENST00000553578 DDX27Q96GQ7 796 aaKnown RBP5.79□□□□□ -1.48
RDH11-204ENST00000553578 GPHNQ9NQX3 736 aaPredicted RBP5.79□□□□□ -1.48
RDH11-204ENST00000553578 KIAA0556O60303 1618 aa5.79□□□□□ -1.48
RDH11-204ENST00000553578 KIAA0586Q9BVV6 1533 aa5.79□□□□□ -1.48
RDH11-204ENST00000553578 RBM25P49756 843 aaKnown RBP5.78□□□□□ -1.48
RDH11-204ENST00000553578 DOK7Q18PE1 504 aa5.78□□□□□ -1.48
RDH11-204ENST00000553578 TCOF1Q13428 1488 aaKnown RBP5.78□□□□□ -1.48
RDH11-204ENST00000553578 APBB1O00213 710 aa5.78□□□□□ -1.48
RDH11-204ENST00000553578 CEP170Q5SW79 1584 aa5.78□□□□□ -1.48
RDH11-204ENST00000553578 SYNJ2O15056 1496 aa5.77□□□□□ -1.48
RDH11-204ENST00000553578 PPP1R15BQ5SWA1 713 aa5.77□□□□□ -1.48
RDH11-204ENST00000553578 CCDC18Q5T9S5 1454 aa5.77□□□□□ -1.49
RDH11-204ENST00000553578 NEFLP07196 543 aa5.77□□□□□ -1.49
RDH11-204ENST00000553578 PLPP6Q8IY26 295 aa5.77□□□□□ -1.49
RDH11-204ENST00000553578 DISP1Q96F81 1524 aa5.77□□□□□ -1.49
RDH11-204ENST00000553578 GRIN2AQ12879 1464 aa5.77□□□□□ -1.49
RDH11-204ENST00000553578 HECW1Q76N89 1606 aa5.77□□□□□ -1.49
RDH11-204ENST00000553578 LRRC9Q6ZRR7 1453 aa5.77□□□□□ -1.49
RDH11-204ENST00000553578 CADPS2Q86UW7 1296 aa5.77□□□□□ -1.49
RDH11-204ENST00000553578 KRI1Q8N9T8 703 aaKnown RBP5.77□□□□□ -1.49
RDH11-204ENST00000553578 CRISPLD2Q9H0B8 497 aa5.77□□□□□ -1.49
RDH11-204ENST00000553578 RAD21O60216 631 aa5.76□□□□□ -1.49
RDH11-204ENST00000553578 TMEM92Q6UXU6 159 aa5.76□□□□□ -1.49
RDH11-204ENST00000553578 CLASP1Q7Z460 1538 aa5.76□□□□□ -1.49
RDH11-204ENST00000553578 FMN1Q68DA7 1419 aa5.76□□□□□ -1.49
RDH11-204ENST00000553578 AKNAQ7Z591 1439 aa5.76□□□□□ -1.49
RDH11-204ENST00000553578 FOXK1P85037 733 aa5.76□□□□□ -1.49
RDH11-204ENST00000553578 ABCA8O94911 1581 aa5.75□□□□□ -1.49
RDH11-204ENST00000553578 ZNF316A6NFI3 1004 aaPredicted RBP5.75□□□□□ -1.49
RDH11-204ENST00000553578 DSG2Q14126 1118 aa5.75□□□□□ -1.49
RDH11-204ENST00000553578 FAM163AQ96GL9 167 aaPredicted RBP5.75□□□□□ -1.49
RDH11-204ENST00000553578 EHBP1L1Q8N3D4 1523 aa5.75□□□□□ -1.49
RDH11-204ENST00000553578 TBC1D12O60347 775 aa5.75□□□□□ -1.49
RDH11-204ENST00000553578 IL27Q8NEV9 243 aa5.75□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms