RNA–Protein interactions for RNA: ENST00000552770.2

CEP290-206, Transcript of centrosomal protein 290, humanhuman

TSL 3

Gene CEP290, Length 1,285 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEP290-206ENST00000552770 NBPF3Q9H094 633 aa12.46□□□□□ -0.41
CEP290-206ENST00000552770 RABGEF1Q9UJ41 708 aa12.45□□□□□ -0.42
CEP290-206ENST00000552770 FBXW7Q969H0 707 aa12.43□□□□□ -0.42
CEP290-206ENST00000552770 BCAMP50895 628 aa12.42□□□□□ -0.42
CEP290-206ENST00000552770 C6orf132Q5T0Z8 1188 aa12.41□□□□□ -0.42
CEP290-206ENST00000552770 DDX12PQ92771 950 aa12.41□□□□□ -0.42
CEP290-206ENST00000552770 KIAA1468Q9P260 1216 aa12.41□□□□□ -0.42
CEP290-206ENST00000552770 RBM33Q96EV2 1170 aaKnown RBP12.4□□□□□ -0.42
CEP290-206ENST00000552770 IFFO2Q5TF58 517 aa12.39□□□□□ -0.43
CEP290-206ENST00000552770 SEPT9Q9UHD8 586 aaPredicted RBP12.39□□□□□ -0.43
CEP290-206ENST00000552770 BBXQ8WY36 941 aaPredicted RBP12.38□□□□□ -0.43
CEP290-206ENST00000552770 A0A0G2JS52 829 aa12.37□□□□□ -0.43
CEP290-206ENST00000552770 EPAS1Q99814 870 aa12.37□□□□□ -0.43
CEP290-206ENST00000552770 ANKK1Q8NFD2 765 aa12.36□□□□□ -0.43
CEP290-206ENST00000552770 TSR1Q2NL82 804 aaKnown RBP12.34□□□□□ -0.43
CEP290-206ENST00000552770 ZFRQ96KR1 1074 aaKnown RBP12.34□□□□□ -0.43
CEP290-206ENST00000552770 SOWAHBA6NEL2 793 aa12.33□□□□□ -0.44
CEP290-206ENST00000552770 TRIM6-TRIM34B2RNG4 842 aa12.33□□□□□ -0.44
CEP290-206ENST00000552770 PRIM1P49642 420 aaKnown RBP12.33□□□□□ -0.44
CEP290-206ENST00000552770 LAPTM4BQ86VI4 370 aa12.32□□□□□ -0.44
CEP290-206ENST00000552770 WBP1LQ9NX94 342 aa12.31□□□□□ -0.44
CEP290-206ENST00000552770 NBR1Q14596 966 aa12.3□□□□□ -0.44
CEP290-206ENST00000552770 PDIA6Q15084 440 aa12.3□□□□□ -0.44
CEP290-206ENST00000552770 EN1Q05925 392 aaPredicted RBP12.29□□□□□ -0.44
CEP290-206ENST00000552770 TSKSQ9UJT2 592 aa12.29□□□□□ -0.44
CEP290-206ENST00000552770 ONECUT3O60422 494 aaPredicted RBP12.28□□□□□ -0.44
CEP290-206ENST00000552770 ITGBL1O95965 494 aaPredicted RBP12.28□□□□□ -0.44
CEP290-206ENST00000552770 C3orf80F5H4A9 247 aa12.25□□□□□ -0.45
CEP290-206ENST00000552770 MAP3K7O43318 606 aa12.25□□□□□ -0.45
CEP290-206ENST00000552770 FAM98CQ17RN3 349 aaKnown RBP12.25□□□□□ -0.45
CEP290-206ENST00000552770 SPRYD3Q8NCJ5 442 aa12.25□□□□□ -0.45
CEP290-206ENST00000552770 FAM198AQ9UFP1 575 aa12.25□□□□□ -0.45
CEP290-206ENST00000552770 RGS20O76081 388 aa12.23□□□□□ -0.45
CEP290-206ENST00000552770 SMAPO00193 183 aa12.21□□□□□ -0.45
CEP290-206ENST00000552770 HPS5Q9UPZ3 1129 aa12.21□□□□□ -0.45
CEP290-206ENST00000552770 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.2□□□□□ -0.46
CEP290-206ENST00000552770 E2F4Q16254 413 aa12.19□□□□□ -0.46
CEP290-206ENST00000552770 CDHR5Q9HBB8 845 aa12.19□□□□□ -0.46
CEP290-206ENST00000552770 GRXCR2A6NFK2 248 aa12.18□□□□□ -0.46
CEP290-206ENST00000552770 SPDYE16A6NNV3 312 aaPredicted RBP12.18□□□□□ -0.46
CEP290-206ENST00000552770 PAXIP1Q6ZW49 1069 aaPredicted RBP12.18□□□□□ -0.46
CEP290-206ENST00000552770 LRCH3Q96II8 777 aa12.18□□□□□ -0.46
CEP290-206ENST00000552770 CFAP44Q96MT7 982 aa12.18□□□□□ -0.46
CEP290-206ENST00000552770 CDCA7LQ96GN5 454 aa12.17□□□□□ -0.46
CEP290-206ENST00000552770 IRX2Q9BZI1 471 aaPredicted RBP12.17□□□□□ -0.46
CEP290-206ENST00000552770 TSR3Q9UJK0 312 aaKnown RBP12.17□□□□□ -0.46
CEP290-206ENST00000552770 NYAP1Q6ZVC0 841 aa12.15□□□□□ -0.46
CEP290-206ENST00000552770 PRSS12P56730 875 aa12.14□□□□□ -0.47
CEP290-206ENST00000552770 PACS2Q86VP3 889 aa12.14□□□□□ -0.47
CEP290-206ENST00000552770 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.14□□□□□ -0.47
CEP290-206ENST00000552770 ARIH1Q9Y4X5 557 aaPredicted RBP12.14□□□□□ -0.47
CEP290-206ENST00000552770 OSBPP22059 807 aa12.13□□□□□ -0.47
CEP290-206ENST00000552770 KCNC4Q03721 635 aa12.13□□□□□ -0.47
CEP290-206ENST00000552770 SAMD7Q7Z3H4 446 aa12.13□□□□□ -0.47
CEP290-206ENST00000552770 TATDN2Q93075 761 aa12.08□□□□□ -0.48
CEP290-206ENST00000552770 PNMA3Q9UL41 463 aa12.08□□□□□ -0.48
CEP290-206ENST00000552770 PPP4CP60510 307 aa12.06□□□□□ -0.48
CEP290-206ENST00000552770 TJAP1Q5JTD0 557 aa12.06□□□□□ -0.48
CEP290-206ENST00000552770 WDR70Q9NW82 654 aa12.06□□□□□ -0.48
CEP290-206ENST00000552770 NUDT18Q6ZVK8 323 aa12.04□□□□□ -0.48
CEP290-206ENST00000552770 NPDC1Q9NQX5 325 aaPredicted RBP12.04□□□□□ -0.48
CEP290-206ENST00000552770 NBPF26B4DH59 902 aa12.03□□□□□ -0.48
CEP290-206ENST00000552770 CERKQ8TCT0 537 aa12.03□□□□□ -0.48
CEP290-206ENST00000552770 PADI6Q6TGC4 694 aa12.01□□□□□ -0.49
CEP290-206ENST00000552770 TTC13Q8NBP0 860 aa12□□□□□ -0.49
CEP290-206ENST00000552770 MTRQ99707 1265 aa12□□□□□ -0.49
CEP290-206ENST00000552770 APLP1P51693 650 aa11.99□□□□□ -0.49
CEP290-206ENST00000552770 ZNF516Q92618 1163 aa11.99□□□□□ -0.49
CEP290-206ENST00000552770 RNF40O75150 1001 aa11.98□□□□□ -0.49
CEP290-206ENST00000552770 LCE2BO14633 110 aa11.97□□□□□ -0.49
CEP290-206ENST00000552770 RBM27Q9P2N5 1060 aaKnown RBP11.97□□□□□ -0.49
CEP290-206ENST00000552770 MLLT3P42568 568 aaPredicted RBP11.96□□□□□ -0.49
CEP290-206ENST00000552770 TSHZ2Q9NRE2 1034 aa11.95□□□□□ -0.5
CEP290-206ENST00000552770 SWT1Q5T5J6 900 aaKnown RBP11.94□□□□□ -0.5
CEP290-206ENST00000552770 Q6ZNB5 142 aa11.94□□□□□ -0.5
CEP290-206ENST00000552770 NKX2-3Q8TAU0 364 aa11.93□□□□□ -0.5
CEP290-206ENST00000552770 IL21Q9HBE4 155 aa11.93□□□□□ -0.5
CEP290-206ENST00000552770 PPP1R18Q6NYC8 613 aa11.92□□□□□ -0.5
CEP290-206ENST00000552770 KCNV2Q8TDN2 545 aa11.91□□□□□ -0.5
CEP290-206ENST00000552770 EYA1Q99502 592 aa11.9□□□□□ -0.5
CEP290-206ENST00000552770 PRKD2Q9BZL6 878 aa11.9□□□□□ -0.5
CEP290-206ENST00000552770 COPS2P61201 443 aa11.87□□□□□ -0.51
CEP290-206ENST00000552770 PLCB2Q00722 1185 aa11.87□□□□□ -0.51
CEP290-206ENST00000552770 GFRA3O60609 400 aa11.84□□□□□ -0.51
CEP290-206ENST00000552770 ARHGEF1Q92888 912 aaKnown RBP11.84□□□□□ -0.51
CEP290-206ENST00000552770 HDGFP51858 240 aaKnown RBP11.83□□□□□ -0.52
CEP290-206ENST00000552770 PTGDRQ13258 359 aa11.83□□□□□ -0.52
CEP290-206ENST00000552770 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.83□□□□□ -0.52
CEP290-206ENST00000552770 FAM161AQ3B820 660 aa11.82□□□□□ -0.52
CEP290-206ENST00000552770 SLF2Q8IX21 1173 aa11.81□□□□□ -0.52
CEP290-206ENST00000552770 ZPR1O75312 459 aa11.77□□□□□ -0.53
CEP290-206ENST00000552770 BLOC1S3Q6QNY0 202 aa11.77□□□□□ -0.53
CEP290-206ENST00000552770 ADGRG1Q9Y653 693 aa11.77□□□□□ -0.53
CEP290-206ENST00000552770 V9GY48 417 aaPredicted RBP11.77□□□□□ -0.53
CEP290-206ENST00000552770 LAPTM4AQ15012 233 aa11.76□□□□□ -0.53
CEP290-206ENST00000552770 EMID1Q96A84 441 aaPredicted RBP11.76□□□□□ -0.53
CEP290-206ENST00000552770 TLL1O43897 1013 aa11.75□□□□□ -0.53
CEP290-206ENST00000552770 TRAF7Q6Q0C0 670 aa11.74□□□□□ -0.53
CEP290-206ENST00000552770 NRG2O14511 850 aaPredicted RBP11.73□□□□□ -0.53
CEP290-206ENST00000552770 DNAJB2P25686 324 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms