RNA–Protein interactions for RNA: ENST00000551964.5

APAF1-210, Transcript of apoptotic peptidase activating factor 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene APAF1, Length 5,444 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APAF1-210ENST00000551964 PANK3Q9H999 370 aa24.12■■□□□ 1.45
APAF1-210ENST00000551964 TRAK1Q9UPV9 953 aa24.12■■□□□ 1.45
APAF1-210ENST00000551964 ATAD2BQ9ULI0 1458 aa24.11■■□□□ 1.45
APAF1-210ENST00000551964 KIAA2012Q0VF49 1180 aa24.11■■□□□ 1.45
APAF1-210ENST00000551964 NGDNQ8NEJ9 315 aaKnown RBP24.11■■□□□ 1.45
APAF1-210ENST00000551964 SLC4A10Q6U841 1118 aa24.11■■□□□ 1.45
APAF1-210ENST00000551964 GORABQ5T7V8 394 aa24.09■■□□□ 1.45
APAF1-210ENST00000551964 UACAQ9BZF9 1416 aa24.09■■□□□ 1.45
APAF1-210ENST00000551964 SUGP2Q8IX01 1082 aaKnown RBP eCLIP24.09■■□□□ 1.457e-6■■■■□ 19.6
APAF1-210ENST00000551964 AMPHP49418 695 aa24.09■■□□□ 1.45
APAF1-210ENST00000551964 GOLGA6L3A6NEY3 463 aa24.07■■□□□ 1.44
APAF1-210ENST00000551964 CHMP3Q9Y3E7 222 aa24.07■■□□□ 1.44
APAF1-210ENST00000551964 PRKRIP1Q9H875 184 aaPredicted RBP24.05■■□□□ 1.44
APAF1-210ENST00000551964 RUSC2Q8N2Y8 1516 aa24.05■■□□□ 1.44
APAF1-210ENST00000551964 SMARCA4P51532 1647 aa24.04■■□□□ 1.44
APAF1-210ENST00000551964 RRP7AQ9Y3A4 280 aaKnown RBP24.04■■□□□ 1.44
APAF1-210ENST00000551964 TAF7LQ5H9L4 462 aa24.03■■□□□ 1.44
APAF1-210ENST00000551964 CENPQQ7L2Z9 268 aaPredicted RBP24.03■■□□□ 1.44
APAF1-210ENST00000551964 HSP90B1P14625 803 aaKnown RBP24.03■■□□□ 1.44
APAF1-210ENST00000551964 USP47Q96K76 1375 aa24.02■■□□□ 1.44
APAF1-210ENST00000551964 CSPP1Q1MSJ5 1256 aa24.02■■□□□ 1.44
APAF1-210ENST00000551964 CLSTN1O94985 981 aa24.01■■□□□ 1.43
APAF1-210ENST00000551964 E9PSI1 815 aa24.01■■□□□ 1.43
APAF1-210ENST00000551964 TPM4P67936 248 aa24■■□□□ 1.43
APAF1-210ENST00000551964 CGNL1Q0VF96 1302 aa24■■□□□ 1.43
APAF1-210ENST00000551964 ZBED9Q6R2W3 1325 aa24■■□□□ 1.43
APAF1-210ENST00000551964 ST18O60284 1047 aa23.99■■□□□ 1.43
APAF1-210ENST00000551964 FANCD2Q9BXW9 1451 aa23.99■■□□□ 1.43
APAF1-210ENST00000551964 LTV1Q96GA3 475 aaPredicted RBP23.98■■□□□ 1.43
APAF1-210ENST00000551964 EVC2Q86UK5 1308 aa23.98■■□□□ 1.43
APAF1-210ENST00000551964 VGFO15240 615 aaPredicted RBP23.97■■□□□ 1.43
APAF1-210ENST00000551964 RRP1P56182 461 aaKnown RBP23.97■■□□□ 1.43
APAF1-210ENST00000551964 FOXD4L1Q9NU39 408 aa23.97■■□□□ 1.43
APAF1-210ENST00000551964 CCDC34Q96HJ3 373 aa23.96■■□□□ 1.43
APAF1-210ENST00000551964 NOL8Q76FK4 1167 aaKnown RBP23.96■■□□□ 1.43
APAF1-210ENST00000551964 ZKSCAN2Q63HK3 967 aa23.95■■□□□ 1.42
APAF1-210ENST00000551964 PTPRGP23470 1445 aa23.95■■□□□ 1.42
APAF1-210ENST00000551964 NUTM2FA1L443 756 aa23.95■■□□□ 1.42
APAF1-210ENST00000551964 FAM161AQ3B820 660 aa23.95■■□□□ 1.42
APAF1-210ENST00000551964 COG3Q96JB2 828 aa23.93■■□□□ 1.42
APAF1-210ENST00000551964 PLIN1O60240 522 aa23.92■■□□□ 1.42
APAF1-210ENST00000551964 PDE4AP27815 886 aa23.92■■□□□ 1.42
APAF1-210ENST00000551964 EXOC6Q8TAG9 804 aa23.92■■□□□ 1.42
APAF1-210ENST00000551964 BCL2L13Q9BXK5 485 aa23.91■■□□□ 1.42
APAF1-210ENST00000551964 KIF16BQ96L93 1317 aa23.91■■□□□ 1.42
APAF1-210ENST00000551964 TMX4Q9H1E5 349 aaPredicted RBP23.91■■□□□ 1.42
APAF1-210ENST00000551964 CRBNQ96SW2 442 aa23.9■■□□□ 1.42
APAF1-210ENST00000551964 DDX11L8A8MPP1 907 aa23.89■■□□□ 1.42
APAF1-210ENST00000551964 PHF14O94880 888 aa23.89■■□□□ 1.42
APAF1-210ENST00000551964 ANKRD45Q5TZF3 282 aa23.89■■□□□ 1.41
APAF1-210ENST00000551964 ELL2O00472 640 aaPredicted RBP23.89■■□□□ 1.41
APAF1-210ENST00000551964 CCDC9Q9Y3X0 531 aaKnown RBP23.89■■□□□ 1.41
APAF1-210ENST00000551964 KIF3AQ9Y496 699 aa23.88■■□□□ 1.41
APAF1-210ENST00000551964 USP35Q9P2H5 1018 aa23.87■■□□□ 1.41
APAF1-210ENST00000551964 MYOM3Q5VTT5 1437 aa23.86■■□□□ 1.41
APAF1-210ENST00000551964 APAF1O14727 1248 aa23.85■■□□□ 1.41
APAF1-210ENST00000551964 NGEFQ8N5V2 710 aa23.85■■□□□ 1.41
APAF1-210ENST00000551964 COG6Q9Y2V7 657 aa23.85■■□□□ 1.41
APAF1-210ENST00000551964 RILPL2Q969X0 211 aa23.84■■□□□ 1.41
APAF1-210ENST00000551964 MINK1Q8N4C8 1332 aaPredicted RBP23.83■■□□□ 1.4
APAF1-210ENST00000551964 C1orf141Q5JVX7 400 aa23.82■■□□□ 1.4
APAF1-210ENST00000551964 FOXD4L5Q5VV16 416 aaPredicted RBP23.81■■□□□ 1.4
APAF1-210ENST00000551964 FOXD4L4Q8WXT5 416 aaPredicted RBP23.81■■□□□ 1.4
APAF1-210ENST00000551964 IGF1RP08069 1367 aa23.8■■□□□ 1.4
APAF1-210ENST00000551964 RASSF8Q8NHQ8 419 aa23.8■■□□□ 1.4
APAF1-210ENST00000551964 TOMM22Q9NS69 142 aa23.8■■□□□ 1.4
APAF1-210ENST00000551964 DDX19BQ9UMR2 479 aa23.8■■□□□ 1.4
APAF1-210ENST00000551964 FGD6Q6ZV73 1430 aa23.8■■□□□ 1.4
APAF1-210ENST00000551964 DIAPH1O60610 1272 aaKnown RBP23.79■■□□□ 1.4
APAF1-210ENST00000551964 CUX1P39880 1505 aa23.79■■□□□ 1.4
APAF1-210ENST00000551964 FGD5Q6ZNL6 1462 aa23.79■■□□□ 1.4
APAF1-210ENST00000551964 GAPVD1Q14C86 1478 aa23.78■■□□□ 1.4
APAF1-210ENST00000551964 SF3A1Q15459 793 aaKnown RBP23.78■■□□□ 1.4
APAF1-210ENST00000551964 TEFQ10587 303 aa23.77■■□□□ 1.4
APAF1-210ENST00000551964 CHMP4CQ96CF2 233 aa23.77■■□□□ 1.4
APAF1-210ENST00000551964 SKOR2Q2VWA4 1001 aaPredicted RBP23.76■■□□□ 1.39
APAF1-210ENST00000551964 ATP6V1DQ9Y5K8 247 aa23.76■■□□□ 1.39
APAF1-210ENST00000551964 SLC4A3P48751 1232 aa23.76■■□□□ 1.39
APAF1-210ENST00000551964 FRAT2O75474 233 aaPredicted RBP23.75■■□□□ 1.39
APAF1-210ENST00000551964 H3BQV1 296 aa23.75■■□□□ 1.39
APAF1-210ENST00000551964 GTF2E1P29083 439 aaPredicted RBP23.75■■□□□ 1.39
APAF1-210ENST00000551964 IFFO2Q5TF58 517 aa23.75■■□□□ 1.39
APAF1-210ENST00000551964 NOC3LQ8WTT2 800 aaKnown RBP23.75■■□□□ 1.39
APAF1-210ENST00000551964 CCDC7Q96M83 1385 aa23.75■■□□□ 1.39
APAF1-210ENST00000551964 DZIP1LQ8IYY4 767 aaKnown RBP23.74■■□□□ 1.39
APAF1-210ENST00000551964 API5Q9BZZ5 524 aaKnown RBP23.74■■□□□ 1.39
APAF1-210ENST00000551964 DDX49Q9Y6V7 483 aaKnown RBP23.74■■□□□ 1.39
APAF1-210ENST00000551964 ARID3AQ99856 593 aa23.74■■□□□ 1.39
APAF1-210ENST00000551964 RIPK4P57078 832 aa23.73■■□□□ 1.39
APAF1-210ENST00000551964 G3V3G9 751 aa23.73■■□□□ 1.39
APAF1-210ENST00000551964 DCAF8Q5TAQ9 597 aa23.73■■□□□ 1.39
APAF1-210ENST00000551964 STAC3Q96MF2 364 aa23.73■■□□□ 1.39
APAF1-210ENST00000551964 RUNDC1Q96C34 613 aa23.72■■□□□ 1.39
APAF1-210ENST00000551964 DIAPH3Q9NSV4 1193 aa23.72■■□□□ 1.39
APAF1-210ENST00000551964 FAM184AQ8NB25 1140 aa23.72■■□□□ 1.39
APAF1-210ENST00000551964 KIF7Q2M1P5 1343 aa23.71■■□□□ 1.39
APAF1-210ENST00000551964 NEXNQ0ZGT2 675 aa23.71■■□□□ 1.39
APAF1-210ENST00000551964 REC8O95072 547 aa23.71■■□□□ 1.39
APAF1-210ENST00000551964 RUFY2Q8WXA3 655 aa23.7■■□□□ 1.38
APAF1-210ENST00000551964 CREBRFQ8IUR6 639 aa23.69■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms