RNA–Protein interactions for RNA: ENST00000551246.1

LSM3P2-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 2, humanhuman

BASIC

Gene LSM3P2, Length 273 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P2-201ENST00000551246 MYT1LQ9UL68 1186 aa7.73□□□□□ -1.17
LSM3P2-201ENST00000551246 GRXCR2A6NFK2 248 aa7.72□□□□□ -1.17
LSM3P2-201ENST00000551246 RBM26Q5T8P6 1007 aaKnown RBP7.7□□□□□ -1.18
LSM3P2-201ENST00000551246 SMYD5Q6GMV2 418 aa7.7□□□□□ -1.18
LSM3P2-201ENST00000551246 GPR37O15354 613 aa7.69□□□□□ -1.18
LSM3P2-201ENST00000551246 EN1Q05925 392 aaPredicted RBP7.69□□□□□ -1.18
LSM3P2-201ENST00000551246 ZNF454Q8N9F8 522 aa7.69□□□□□ -1.18
LSM3P2-201ENST00000551246 MARVELD3Q96A59 401 aa7.69□□□□□ -1.18
LSM3P2-201ENST00000551246 FAM163AQ96GL9 167 aaPredicted RBP7.69□□□□□ -1.18
LSM3P2-201ENST00000551246 EPAS1Q99814 870 aa7.69□□□□□ -1.18
LSM3P2-201ENST00000551246 ERICH6BQ5W0A0 696 aa7.68□□□□□ -1.18
LSM3P2-201ENST00000551246 TYW1BQ6NUM6 668 aa7.68□□□□□ -1.18
LSM3P2-201ENST00000551246 POTEB3A0JP26 581 aa7.67□□□□□ -1.18
LSM3P2-201ENST00000551246 TULP1O00294 542 aaPredicted RBP7.67□□□□□ -1.18
LSM3P2-201ENST00000551246 POTEBQ6S5H4 581 aa7.67□□□□□ -1.18
LSM3P2-201ENST00000551246 UBE2Q2Q8WVN8 375 aa7.67□□□□□ -1.18
LSM3P2-201ENST00000551246 ADAM33Q9BZ11 813 aa7.67□□□□□ -1.18
LSM3P2-201ENST00000551246 RBM19Q9Y4C8 960 aaKnown RBP7.67□□□□□ -1.18
LSM3P2-201ENST00000551246 FANCIQ9NVI1 1328 aa7.67□□□□□ -1.18
LSM3P2-201ENST00000551246 PSDA5PKW4 1024 aaPredicted RBP7.66□□□□□ -1.18
LSM3P2-201ENST00000551246 EMP3P54852 163 aa7.66□□□□□ -1.18
LSM3P2-201ENST00000551246 FBXW7Q969H0 707 aa7.66□□□□□ -1.18
LSM3P2-201ENST00000551246 ZDHHC16Q969W1 377 aa7.66□□□□□ -1.18
LSM3P2-201ENST00000551246 YTHDC1Q96MU7 727 aaKnown RBP7.66□□□□□ -1.18
LSM3P2-201ENST00000551246 CDHR5Q9HBB8 845 aa7.66□□□□□ -1.18
LSM3P2-201ENST00000551246 TSR1Q2NL82 804 aaKnown RBP7.65□□□□□ -1.18
LSM3P2-201ENST00000551246 PPP4R3BQ5MIZ7 849 aa7.64□□□□□ -1.19
LSM3P2-201ENST00000551246 VARS2Q5ST30 1063 aaKnown RBP7.64□□□□□ -1.19
LSM3P2-201ENST00000551246 GPIHBP1Q8IV16 184 aa7.64□□□□□ -1.19
LSM3P2-201ENST00000551246 BCL2L12Q9HB09 334 aa7.64□□□□□ -1.19
LSM3P2-201ENST00000551246 ERBB3P21860 1342 aa7.63□□□□□ -1.19
LSM3P2-201ENST00000551246 MAP3K7O43318 606 aa7.63□□□□□ -1.19
LSM3P2-201ENST00000551246 POTEEQ6S8J3 1075 aa7.63□□□□□ -1.19
LSM3P2-201ENST00000551246 ZC3H15Q8WU90 426 aaKnown RBP7.63□□□□□ -1.19
LSM3P2-201ENST00000551246 RBM33Q96EV2 1170 aaKnown RBP7.63□□□□□ -1.19
LSM3P2-201ENST00000551246 NPDC1Q9NQX5 325 aaPredicted RBP7.63□□□□□ -1.19
LSM3P2-201ENST00000551246 FAM205CA6NFA0 338 aa7.62□□□□□ -1.19
LSM3P2-201ENST00000551246 TPRNQ4KMQ1 711 aa7.62□□□□□ -1.19
LSM3P2-201ENST00000551246 HS3ST6Q96QI5 342 aa7.62□□□□□ -1.19
LSM3P2-201ENST00000551246 PTGDRQ13258 359 aa7.61□□□□□ -1.19
LSM3P2-201ENST00000551246 C6orf132Q5T0Z8 1188 aa7.61□□□□□ -1.19
LSM3P2-201ENST00000551246 NUTM2FA1L443 756 aa7.6□□□□□ -1.19
LSM3P2-201ENST00000551246 ZMYND10O75800 440 aa7.59□□□□□ -1.19
LSM3P2-201ENST00000551246 COL9A1P20849 921 aa7.59□□□□□ -1.19
LSM3P2-201ENST00000551246 ZNF687Q8N1G0 1237 aa7.59□□□□□ -1.19
LSM3P2-201ENST00000551246 FCHSD2O94868 740 aa7.57□□□□□ -1.2
LSM3P2-201ENST00000551246 PPP1R3GB7ZBB8 358 aa7.56□□□□□ -1.2
LSM3P2-201ENST00000551246 GNPATO15228 680 aa7.56□□□□□ -1.2
LSM3P2-201ENST00000551246 FECHP22830 423 aa7.56□□□□□ -1.2
LSM3P2-201ENST00000551246 PTPREP23469 700 aa7.56□□□□□ -1.2
LSM3P2-201ENST00000551246 PSEN2P49810 448 aa7.56□□□□□ -1.2
LSM3P2-201ENST00000551246 HIC1Q14526 733 aa7.56□□□□□ -1.2
LSM3P2-201ENST00000551246 BARGINQ6ZT62 677 aa7.56□□□□□ -1.2
LSM3P2-201ENST00000551246 DEKP35659 375 aaKnown RBP7.55□□□□□ -1.2
LSM3P2-201ENST00000551246 KCNK17Q96T54 332 aa7.55□□□□□ -1.2
LSM3P2-201ENST00000551246 AXIN2Q9Y2T1 843 aa7.55□□□□□ -1.2
LSM3P2-201ENST00000551246 ABCC9O60706 1549 aa7.54□□□□□ -1.2
LSM3P2-201ENST00000551246 ARHGAP33O14559 1287 aa7.54□□□□□ -1.2
LSM3P2-201ENST00000551246 PBX2P40425 430 aa7.54□□□□□ -1.2
LSM3P2-201ENST00000551246 DMRTA1Q5VZB9 504 aa7.54□□□□□ -1.2
LSM3P2-201ENST00000551246 TTC13Q8NBP0 860 aa7.54□□□□□ -1.2
LSM3P2-201ENST00000551246 CERKQ8TCT0 537 aa7.54□□□□□ -1.2
LSM3P2-201ENST00000551246 RBM27Q9P2N5 1060 aaKnown RBP7.54□□□□□ -1.2
LSM3P2-201ENST00000551246 FAM198AQ9UFP1 575 aa7.54□□□□□ -1.2
LSM3P2-201ENST00000551246 ZBED2Q9BTP6 218 aa7.53□□□□□ -1.2
LSM3P2-201ENST00000551246 POTEGQ6S5H5 508 aa7.52□□□□□ -1.21
LSM3P2-201ENST00000551246 PADI6Q6TGC4 694 aa7.52□□□□□ -1.21
LSM3P2-201ENST00000551246 SALL2Q9Y467 1007 aaPredicted RBP7.52□□□□□ -1.21
LSM3P2-201ENST00000551246 RSF1Q96T23 1441 aaPredicted RBP7.52□□□□□ -1.21
LSM3P2-201ENST00000551246 POTEMA6NI47 508 aa7.51□□□□□ -1.21
LSM3P2-201ENST00000551246 PRSS12P56730 875 aa7.51□□□□□ -1.21
LSM3P2-201ENST00000551246 MAP2K5Q13163 448 aa7.51□□□□□ -1.21
LSM3P2-201ENST00000551246 PROX2Q3B8N5 592 aa7.51□□□□□ -1.21
LSM3P2-201ENST00000551246 CDCA7LQ96GN5 454 aa7.51□□□□□ -1.21
LSM3P2-201ENST00000551246 KRTAP3-3Q9BYR6 98 aa7.51□□□□□ -1.21
LSM3P2-201ENST00000551246 KRTAP3-2Q9BYR7 98 aa7.51□□□□□ -1.21
LSM3P2-201ENST00000551246 TSKSQ9UJT2 592 aa7.51□□□□□ -1.21
LSM3P2-201ENST00000551246 C3orf80F5H4A9 247 aa7.5□□□□□ -1.21
LSM3P2-201ENST00000551246 SLC4A5Q9BY07 1137 aa7.5□□□□□ -1.21
LSM3P2-201ENST00000551246 RB1CC1Q8TDY2 1594 aa7.5□□□□□ -1.21
LSM3P2-201ENST00000551246 TRIM6-TRIM34B2RNG4 842 aa7.49□□□□□ -1.21
LSM3P2-201ENST00000551246 SLC24A3Q9HC58 644 aa7.49□□□□□ -1.21
LSM3P2-201ENST00000551246 IRF6O14896 467 aa7.48□□□□□ -1.21
LSM3P2-201ENST00000551246 CCDC102AQ96A19 550 aa7.48□□□□□ -1.21
LSM3P2-201ENST00000551246 MINK1Q8N4C8 1332 aaPredicted RBP7.48□□□□□ -1.21
LSM3P2-201ENST00000551246 ONECUT3O60422 494 aaPredicted RBP7.47□□□□□ -1.21
LSM3P2-201ENST00000551246 LSM11P83369 360 aaKnown RBP eCLIP7.47□□□□□ -1.21
LSM3P2-201ENST00000551246 KCNH8Q96L42 1107 aa7.47□□□□□ -1.21
LSM3P2-201ENST00000551246 VPS9D1Q9Y2B5 631 aa7.47□□□□□ -1.21
LSM3P2-201ENST00000551246 ADGRG1Q9Y653 693 aa7.47□□□□□ -1.21
LSM3P2-201ENST00000551246 C11orf95C9JLR9 678 aaPredicted RBP7.46□□□□□ -1.22
LSM3P2-201ENST00000551246 FAM161AQ3B820 660 aa7.46□□□□□ -1.22
LSM3P2-201ENST00000551246 TNIKQ9UKE5 1360 aa7.46□□□□□ -1.22
LSM3P2-201ENST00000551246 TK2O00142 265 aa7.45□□□□□ -1.22
LSM3P2-201ENST00000551246 PHOX2BQ99453 314 aa7.45□□□□□ -1.22
LSM3P2-201ENST00000551246 METTL3Q86U44 580 aaKnown RBP7.44□□□□□ -1.22
LSM3P2-201ENST00000551246 CDAN1Q8IWY9 1227 aa7.44□□□□□ -1.22
LSM3P2-201ENST00000551246 PXYLP1Q8TE99 480 aa7.44□□□□□ -1.22
LSM3P2-201ENST00000551246 AK7Q96M32 723 aa7.44□□□□□ -1.22
LSM3P2-201ENST00000551246 BHMG1C9JSJ3 638 aaPredicted RBP7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms