RNA–Protein interactions for RNA: ENST00000551242.5

ERBB3-219, Transcript of erb-b2 receptor tyrosine kinase 3, humanhuman

TSL 1 (best)

Gene ERBB3, Length 2,755 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB3-219ENST00000551242 KDM2BQ8NHM5 1336 aa16.02■□□□□ 0.15
ERBB3-219ENST00000551242 FAM161AQ3B820 660 aa16.02■□□□□ 0.15
ERBB3-219ENST00000551242 TARBP1Q13395 1621 aaKnown RBP16.01■□□□□ 0.15
ERBB3-219ENST00000551242 RGS3P49796 1198 aa16.01■□□□□ 0.15
ERBB3-219ENST00000551242 KIF14Q15058 1648 aa16■□□□□ 0.15
ERBB3-219ENST00000551242 POGKQ9P215 609 aa15.98■□□□□ 0.15
ERBB3-219ENST00000551242 KTN1Q86UP2 1357 aaKnown RBP15.98■□□□□ 0.15
ERBB3-219ENST00000551242 KIAA1107Q9UPP5 1409 aa15.98■□□□□ 0.15
ERBB3-219ENST00000551242 CC2D1BQ5T0F9 858 aaKnown RBP15.97■□□□□ 0.15
ERBB3-219ENST00000551242 CENPQQ7L2Z9 268 aaPredicted RBP15.97■□□□□ 0.15
ERBB3-219ENST00000551242 RRAGDQ9NQL2 400 aaPredicted RBP15.96■□□□□ 0.15
ERBB3-219ENST00000551242 PARD3Q8TEW0 1356 aa15.96■□□□□ 0.14
ERBB3-219ENST00000551242 RALGAPBQ86X10 1494 aa15.95■□□□□ 0.14
ERBB3-219ENST00000551242 DNMT1P26358 1616 aaKnown RBP15.94■□□□□ 0.14
ERBB3-219ENST00000551242 ARXQ96QS3 562 aa15.92■□□□□ 0.14
ERBB3-219ENST00000551242 PER1O15534 1290 aaPredicted RBP15.91■□□□□ 0.14
ERBB3-219ENST00000551242 CHMP7Q8WUX9 453 aaPredicted RBP15.91■□□□□ 0.14
ERBB3-219ENST00000551242 UHRF1BP1Q6BDS2 1440 aa15.91■□□□□ 0.14
ERBB3-219ENST00000551242 ZNF777Q9ULD5 760 aaPredicted RBP15.91■□□□□ 0.14
ERBB3-219ENST00000551242 SLKQ9H2G2 1235 aaPredicted RBP15.9■□□□□ 0.14
ERBB3-219ENST00000551242 PKNOX2Q96KN3 472 aa15.89■□□□□ 0.13
ERBB3-219ENST00000551242 PBRM1Q86U86 1689 aa15.89■□□□□ 0.13
ERBB3-219ENST00000551242 E9PCH4 1651 aa15.88■□□□□ 0.13
ERBB3-219ENST00000551242 BLMP54132 1417 aaPredicted RBP15.88■□□□□ 0.13
ERBB3-219ENST00000551242 IFT140Q96RY7 1462 aa15.88■□□□□ 0.13
ERBB3-219ENST00000551242 ADAMTS8Q9UP79 889 aa15.87■□□□□ 0.13
ERBB3-219ENST00000551242 USP19O94966 1318 aa15.86■□□□□ 0.13
ERBB3-219ENST00000551242 WDR62O43379 1518 aa15.86■□□□□ 0.13
ERBB3-219ENST00000551242 SEC24BO95487 1268 aa15.86■□□□□ 0.13
ERBB3-219ENST00000551242 DUSP27Q5VZP5 1158 aa15.86■□□□□ 0.13
ERBB3-219ENST00000551242 CFDP1Q9UEE9 299 aaPredicted RBP15.85■□□□□ 0.13
ERBB3-219ENST00000551242 KIAA0586Q9BVV6 1533 aa15.85■□□□□ 0.13
ERBB3-219ENST00000551242 NUP155O75694 1391 aa15.84■□□□□ 0.13
ERBB3-219ENST00000551242 PLEKHH1Q9ULM0 1364 aa15.84■□□□□ 0.13
ERBB3-219ENST00000551242 PANK3Q9H999 370 aa15.84■□□□□ 0.13
ERBB3-219ENST00000551242 ZMYM4Q5VZL5 1548 aa15.83■□□□□ 0.13
ERBB3-219ENST00000551242 ADAMTS12P58397 1594 aa15.83■□□□□ 0.13
ERBB3-219ENST00000551242 NBPF1Q3BBV0 1214 aa15.83■□□□□ 0.13
ERBB3-219ENST00000551242 NAP1L5Q96NT1 182 aaPredicted RBP15.82■□□□□ 0.12
ERBB3-219ENST00000551242 IQGAP2Q13576 1575 aa15.82■□□□□ 0.12
ERBB3-219ENST00000551242 CAMSAP2Q08AD1 1489 aa15.81■□□□□ 0.12
ERBB3-219ENST00000551242 VSIG10Q8N0Z9 540 aa15.81■□□□□ 0.12
ERBB3-219ENST00000551242 ANKRD50Q9ULJ7 1429 aa15.8■□□□□ 0.12
ERBB3-219ENST00000551242 IGHDP01880 384 aa15.8■□□□□ 0.12
ERBB3-219ENST00000551242 L1TD1Q5T7N2 865 aaKnown RBP15.8■□□□□ 0.12
ERBB3-219ENST00000551242 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.8■□□□□ 0.12
ERBB3-219ENST00000551242 ARHGEF12Q9NZN5 1544 aa15.8■□□□□ 0.12
ERBB3-219ENST00000551242 EIF4G3O43432 1585 aaKnown RBP15.79■□□□□ 0.12
ERBB3-219ENST00000551242 DISP3Q9P2K9 1392 aa15.79■□□□□ 0.12
ERBB3-219ENST00000551242 XRCC6P12956 609 aaKnown RBP eCLIP15.79■□□□□ 0.12
ERBB3-219ENST00000551242 GOLGA2Q08379 1002 aa15.79■□□□□ 0.12
ERBB3-219ENST00000551242 RGL3Q3MIN7 710 aa15.79■□□□□ 0.12
ERBB3-219ENST00000551242 PLEKHH2Q8IVE3 1493 aa15.78■□□□□ 0.12
ERBB3-219ENST00000551242 PANK2Q9BZ23 570 aa15.78■□□□□ 0.12
ERBB3-219ENST00000551242 GZF1Q9H116 711 aaPredicted RBP15.78■□□□□ 0.12
ERBB3-219ENST00000551242 BCAR3O75815 825 aa15.78■□□□□ 0.12
ERBB3-219ENST00000551242 ANKRD30AQ9BXX3 1397 aa15.78■□□□□ 0.12
ERBB3-219ENST00000551242 BECN1Q14457 450 aa15.77■□□□□ 0.12
ERBB3-219ENST00000551242 GLIPR1L2Q4G1C9 344 aa15.77■□□□□ 0.12
ERBB3-219ENST00000551242 PRG4Q92954 1404 aaPredicted RBP15.77■□□□□ 0.12
ERBB3-219ENST00000551242 ZMYND15Q9H091 742 aa15.77■□□□□ 0.11
ERBB3-219ENST00000551242 PNNQ9H307 717 aaKnown RBP15.77■□□□□ 0.11
ERBB3-219ENST00000551242 INSRP06213 1382 aa15.76■□□□□ 0.11
ERBB3-219ENST00000551242 WDR43Q15061 677 aaKnown RBP eCLIP15.76■□□□□ 0.11
ERBB3-219ENST00000551242 SPRYD3Q8NCJ5 442 aa15.76■□□□□ 0.11
ERBB3-219ENST00000551242 ANTXR1Q9H6X2 564 aa15.75■□□□□ 0.11
ERBB3-219ENST00000551242 SPINK5Q9NQ38 1064 aaPredicted RBP15.75■□□□□ 0.11
ERBB3-219ENST00000551242 GRIN2AQ12879 1464 aa15.75■□□□□ 0.11
ERBB3-219ENST00000551242 TESK2Q96S53 571 aa15.75■□□□□ 0.11
ERBB3-219ENST00000551242 ZNF521Q96K83 1311 aa15.74■□□□□ 0.11
ERBB3-219ENST00000551242 NUP153P49790 1475 aaKnown RBP15.74■□□□□ 0.11
ERBB3-219ENST00000551242 CCDC146Q8IYE0 955 aa15.74■□□□□ 0.11
ERBB3-219ENST00000551242 ADGBQ8N7X0 1667 aa15.73■□□□□ 0.11
ERBB3-219ENST00000551242 GOLGA6L3A6NEY3 463 aa15.73■□□□□ 0.11
ERBB3-219ENST00000551242 SLFN5Q08AF3 891 aa15.73■□□□□ 0.11
ERBB3-219ENST00000551242 HSP90AA2PQ14568 343 aaPredicted RBP15.73■□□□□ 0.11
ERBB3-219ENST00000551242 ADGRL2O95490 1459 aa15.72■□□□□ 0.11
ERBB3-219ENST00000551242 JPH4Q96JJ6 628 aa15.72■□□□□ 0.11
ERBB3-219ENST00000551242 PPP2R1AP30153 589 aa15.71■□□□□ 0.11
ERBB3-219ENST00000551242 COL17A1Q9UMD9 1497 aaPredicted RBP15.71■□□□□ 0.11
ERBB3-219ENST00000551242 GPATCH8Q9UKJ3 1502 aaKnown RBP15.71■□□□□ 0.11
ERBB3-219ENST00000551242 HSP90AA1P07900 732 aaKnown RBP15.71■□□□□ 0.11
ERBB3-219ENST00000551242 EIF3AQ14152 1382 aaKnown RBP15.71■□□□□ 0.11
ERBB3-219ENST00000551242 PRAG1Q86YV5 1406 aa15.71■□□□□ 0.11
ERBB3-219ENST00000551242 CLCN1P35523 988 aa15.7■□□□□ 0.1
ERBB3-219ENST00000551242 TBC1D2Q9BYX2 928 aa15.7■□□□□ 0.1
ERBB3-219ENST00000551242 FSD2A1L4K1 749 aa15.69■□□□□ 0.1
ERBB3-219ENST00000551242 NLRP1Q9C000 1473 aa15.69■□□□□ 0.1
ERBB3-219ENST00000551242 COG6Q9Y2V7 657 aa15.69■□□□□ 0.1
ERBB3-219ENST00000551242 CEP170Q5SW79 1584 aa15.68■□□□□ 0.1
ERBB3-219ENST00000551242 PANK1Q8TE04 598 aa15.68■□□□□ 0.1
ERBB3-219ENST00000551242 DISP1Q96F81 1524 aa15.68■□□□□ 0.1
ERBB3-219ENST00000551242 KDM5DQ9BY66 1539 aa15.68■□□□□ 0.1
ERBB3-219ENST00000551242 ERBINQ96RT1 1412 aa15.68■□□□□ 0.1
ERBB3-219ENST00000551242 APAF1O14727 1248 aa15.67■□□□□ 0.1
ERBB3-219ENST00000551242 TMF1P82094 1093 aa15.67■□□□□ 0.1
ERBB3-219ENST00000551242 VIRMAQ69YN4 1812 aaKnown RBP15.67■□□□□ 0.1
ERBB3-219ENST00000551242 MCM4P33991 863 aa15.67■□□□□ 0.1
ERBB3-219ENST00000551242 DMRT2Q9Y5R5 561 aa15.67■□□□□ 0.1
ERBB3-219ENST00000551242 TRPM1Q7Z4N2 1603 aa15.67■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms