RNA–Protein interactions for RNA: ENST00000550069.1

PFDN5-209, Transcript of prefoldin subunit 5, humanhuman

TSL 2

Gene PFDN5, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN5-209ENST00000550069 DMRTA1Q5VZB9 504 aa10.71□□□□□ -0.69
PFDN5-209ENST00000550069 TYW1BQ6NUM6 668 aa10.71□□□□□ -0.69
PFDN5-209ENST00000550069 CDHR5Q9HBB8 845 aa10.71□□□□□ -0.69
PFDN5-209ENST00000550069 EN1Q05925 392 aaPredicted RBP10.7□□□□□ -0.7
PFDN5-209ENST00000550069 KCNK17Q96T54 332 aa10.7□□□□□ -0.7
PFDN5-209ENST00000550069 PSDA5PKW4 1024 aaPredicted RBP10.69□□□□□ -0.7
PFDN5-209ENST00000550069 COL9A1P20849 921 aa10.69□□□□□ -0.7
PFDN5-209ENST00000550069 BCL2L12Q9HB09 334 aa10.69□□□□□ -0.7
PFDN5-209ENST00000550069 RBM26Q5T8P6 1007 aaKnown RBP10.68□□□□□ -0.7
PFDN5-209ENST00000550069 EPAS1Q99814 870 aa10.68□□□□□ -0.7
PFDN5-209ENST00000550069 MAP3K7O43318 606 aa10.66□□□□□ -0.7
PFDN5-209ENST00000550069 ZCCHC6Q5VYS8 1495 aaKnown RBP10.66□□□□□ -0.7
PFDN5-209ENST00000550069 C6orf132Q5T0Z8 1188 aa10.65□□□□□ -0.7
PFDN5-209ENST00000550069 FBXW7Q969H0 707 aa10.65□□□□□ -0.7
PFDN5-209ENST00000550069 ARHGAP33O14559 1287 aa10.64□□□□□ -0.71
PFDN5-209ENST00000550069 PTPREP23469 700 aa10.62□□□□□ -0.71
PFDN5-209ENST00000550069 LSM11P83369 360 aaKnown RBP eCLIP10.62□□□□□ -0.71
PFDN5-209ENST00000550069 PBX2P40425 430 aa10.61□□□□□ -0.71
PFDN5-209ENST00000550069 PROX2Q3B8N5 592 aa10.61□□□□□ -0.71
PFDN5-209ENST00000550069 NPDC1Q9NQX5 325 aaPredicted RBP10.61□□□□□ -0.71
PFDN5-209ENST00000550069 GPR37O15354 613 aa10.59□□□□□ -0.71
PFDN5-209ENST00000550069 ANKRD13DQ6ZTN6 518 aa10.59□□□□□ -0.71
PFDN5-209ENST00000550069 PPP1R3GB7ZBB8 358 aa10.58□□□□□ -0.72
PFDN5-209ENST00000550069 ZBED2Q9BTP6 218 aa10.58□□□□□ -0.72
PFDN5-209ENST00000550069 FAM198AQ9UFP1 575 aa10.58□□□□□ -0.72
PFDN5-209ENST00000550069 C3orf80F5H4A9 247 aa10.57□□□□□ -0.72
PFDN5-209ENST00000550069 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.57□□□□□ -0.72
PFDN5-209ENST00000550069 NUTM2FA1L443 756 aa10.56□□□□□ -0.72
PFDN5-209ENST00000550069 ADGRD1Q6QNK2 874 aa10.55□□□□□ -0.72
PFDN5-209ENST00000550069 PTGDRQ13258 359 aa10.54□□□□□ -0.72
PFDN5-209ENST00000550069 LMOD2Q6P5Q4 547 aa10.54□□□□□ -0.72
PFDN5-209ENST00000550069 TSKSQ9UJT2 592 aa10.54□□□□□ -0.72
PFDN5-209ENST00000550069 VPS9D1Q9Y2B5 631 aa10.54□□□□□ -0.72
PFDN5-209ENST00000550069 FECHP22830 423 aa10.52□□□□□ -0.73
PFDN5-209ENST00000550069 PCDH10Q9P2E7 1040 aa10.52□□□□□ -0.73
PFDN5-209ENST00000550069 HRO43593 1189 aa10.51□□□□□ -0.73
PFDN5-209ENST00000550069 SMYD5Q6GMV2 418 aa10.51□□□□□ -0.73
PFDN5-209ENST00000550069 SPNS2Q8IVW8 549 aa10.51□□□□□ -0.73
PFDN5-209ENST00000550069 BCANQ96GW7 911 aa10.51□□□□□ -0.73
PFDN5-209ENST00000550069 PADI6Q6TGC4 694 aa10.5□□□□□ -0.73
PFDN5-209ENST00000550069 CDCA7LQ96GN5 454 aa10.5□□□□□ -0.73
PFDN5-209ENST00000550069 PRSS12P56730 875 aa10.49□□□□□ -0.73
PFDN5-209ENST00000550069 FAM161AQ3B820 660 aa10.49□□□□□ -0.73
PFDN5-209ENST00000550069 GPIHBP1Q8IV16 184 aa10.49□□□□□ -0.73
PFDN5-209ENST00000550069 KCNH8Q96L42 1107 aa10.49□□□□□ -0.73
PFDN5-209ENST00000550069 TRIM6-TRIM34B2RNG4 842 aa10.48□□□□□ -0.73
PFDN5-209ENST00000550069 KIAA1468Q9P260 1216 aa10.48□□□□□ -0.73
PFDN5-209ENST00000550069 TK2O00142 265 aa10.47□□□□□ -0.73
PFDN5-209ENST00000550069 SMAPO00193 183 aa10.47□□□□□ -0.73
PFDN5-209ENST00000550069 SLC4A5Q9BY07 1137 aa10.47□□□□□ -0.73
PFDN5-209ENST00000550069 SHROOM4Q9ULL8 1493 aa10.47□□□□□ -0.73
PFDN5-209ENST00000550069 BHMG1C9JSJ3 638 aaPredicted RBP10.46□□□□□ -0.73
PFDN5-209ENST00000550069 TTC13Q8NBP0 860 aa10.46□□□□□ -0.73
PFDN5-209ENST00000550069 SEPT9Q9UHD8 586 aaPredicted RBP10.46□□□□□ -0.73
PFDN5-209ENST00000550069 FCHSD2O94868 740 aa10.45□□□□□ -0.74
PFDN5-209ENST00000550069 CERKQ8TCT0 537 aa10.42□□□□□ -0.74
PFDN5-209ENST00000550069 ZC3H15Q8WU90 426 aaKnown RBP10.42□□□□□ -0.74
PFDN5-209ENST00000550069 RABGEF1Q9UJ41 708 aa10.42□□□□□ -0.74
PFDN5-209ENST00000550069 TULP1O00294 542 aaPredicted RBP10.4□□□□□ -0.74
PFDN5-209ENST00000550069 GNPATO15228 680 aa10.4□□□□□ -0.74
PFDN5-209ENST00000550069 HIC1Q14526 733 aa10.4□□□□□ -0.74
PFDN5-209ENST00000550069 UNC13AQ9UPW8 1703 aa10.4□□□□□ -0.74
PFDN5-209ENST00000550069 MMRN1Q13201 1228 aa10.39□□□□□ -0.75
PFDN5-209ENST00000550069 NUDT18Q6ZVK8 323 aa10.39□□□□□ -0.75
PFDN5-209ENST00000550069 RBM27Q9P2N5 1060 aaKnown RBP10.39□□□□□ -0.75
PFDN5-209ENST00000550069 PNMA3Q9UL41 463 aa10.39□□□□□ -0.75
PFDN5-209ENST00000550069 TATDN2Q93075 761 aa10.38□□□□□ -0.75
PFDN5-209ENST00000550069 ADGRG1Q9Y653 693 aa10.38□□□□□ -0.75
PFDN5-209ENST00000550069 NLRP7Q8WX94 980 aa10.37□□□□□ -0.75
PFDN5-209ENST00000550069 MYT1LQ9UL68 1186 aa10.37□□□□□ -0.75
PFDN5-209ENST00000550069 ONECUT3O60422 494 aaPredicted RBP10.36□□□□□ -0.75
PFDN5-209ENST00000550069 ZMYND10O75800 440 aa10.35□□□□□ -0.75
PFDN5-209ENST00000550069 PACS2Q86VP3 889 aa10.35□□□□□ -0.75
PFDN5-209ENST00000550069 MRPL50Q8N5N7 158 aaKnown RBP10.35□□□□□ -0.75
PFDN5-209ENST00000550069 PHOX2BQ99453 314 aa10.35□□□□□ -0.75
PFDN5-209ENST00000550069 EYA1Q99502 592 aa10.35□□□□□ -0.75
PFDN5-209ENST00000550069 PLSCR2Q9NRY7 297 aa10.35□□□□□ -0.75
PFDN5-209ENST00000550069 NBPF3Q9H094 633 aa10.34□□□□□ -0.75
PFDN5-209ENST00000550069 NBPF26B4DH59 902 aa10.33□□□□□ -0.76
PFDN5-209ENST00000550069 KCTD12Q96CX2 325 aaKnown RBP10.33□□□□□ -0.76
PFDN5-209ENST00000550069 ZFRQ96KR1 1074 aaKnown RBP10.32□□□□□ -0.76
PFDN5-209ENST00000550069 FAM98CQ17RN3 349 aaKnown RBP10.31□□□□□ -0.76
PFDN5-209ENST00000550069 BARGINQ6ZT62 677 aa10.31□□□□□ -0.76
PFDN5-209ENST00000550069 RNF166Q96A37 237 aaPredicted RBP10.31□□□□□ -0.76
PFDN5-209ENST00000550069 BCAMP50895 628 aa10.3□□□□□ -0.76
PFDN5-209ENST00000550069 MAP2K5Q13163 448 aa10.3□□□□□ -0.76
PFDN5-209ENST00000550069 METTL3Q86U44 580 aaKnown RBP10.3□□□□□ -0.76
PFDN5-209ENST00000550069 PXYLP1Q8TE99 480 aa10.3□□□□□ -0.76
PFDN5-209ENST00000550069 CCDC102AQ96A19 550 aa10.3□□□□□ -0.76
PFDN5-209ENST00000550069 IRF6O14896 467 aa10.28□□□□□ -0.76
PFDN5-209ENST00000550069 SAMD7Q7Z3H4 446 aa10.28□□□□□ -0.76
PFDN5-209ENST00000550069 LAPTM4BQ86VI4 370 aa10.28□□□□□ -0.76
PFDN5-209ENST00000550069 WNT2BQ93097 391 aa10.28□□□□□ -0.76
PFDN5-209ENST00000550069 STAC3Q96MF2 364 aa10.28□□□□□ -0.76
PFDN5-209ENST00000550069 BICRAQ9NZM4 1560 aa10.27□□□□□ -0.76
PFDN5-209ENST00000550069 RCCD1A6NED2 376 aa10.27□□□□□ -0.77
PFDN5-209ENST00000550069 SWT1Q5T5J6 900 aaKnown RBP10.26□□□□□ -0.77
PFDN5-209ENST00000550069 THSD4Q6ZMP0 1018 aa10.25□□□□□ -0.77
PFDN5-209ENST00000550069 SLC24A3Q9HC58 644 aa10.25□□□□□ -0.77
PFDN5-209ENST00000550069 GOLGA8CPA6NN73 597 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms