RNA–Protein interactions for RNA: ENST00000549757.5

SMARCC2-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

TSL 5

Gene SMARCC2, Length 1,062 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-207ENST00000549757 DPYSL4O14531 572 aa9.66□□□□□ -0.86
SMARCC2-207ENST00000549757 EVI5O60447 810 aa9.66□□□□□ -0.86
SMARCC2-207ENST00000549757 MAP3K9P80192 1104 aa9.66□□□□□ -0.86
SMARCC2-207ENST00000549757 KDM2AQ9Y2K7 1162 aa9.66□□□□□ -0.86
SMARCC2-207ENST00000549757 ARIH1Q9Y4X5 557 aaPredicted RBP9.66□□□□□ -0.86
SMARCC2-207ENST00000549757 ZNF687Q8N1G0 1237 aa9.65□□□□□ -0.86
SMARCC2-207ENST00000549757 KRTAP3-3Q9BYR6 98 aa9.64□□□□□ -0.87
SMARCC2-207ENST00000549757 KRTAP3-2Q9BYR7 98 aa9.64□□□□□ -0.87
SMARCC2-207ENST00000549757 MRC2Q9UBG0 1479 aa9.64□□□□□ -0.87
SMARCC2-207ENST00000549757 CADPSQ9ULU8 1353 aa9.63□□□□□ -0.87
SMARCC2-207ENST00000549757 WIZO95785 1651 aa9.62□□□□□ -0.87
SMARCC2-207ENST00000549757 PSDA5PKW4 1024 aaPredicted RBP9.61□□□□□ -0.87
SMARCC2-207ENST00000549757 PDIA6Q15084 440 aa9.61□□□□□ -0.87
SMARCC2-207ENST00000549757 POTEEQ6S8J3 1075 aa9.61□□□□□ -0.87
SMARCC2-207ENST00000549757 KCNV2Q8TDN2 545 aa9.61□□□□□ -0.87
SMARCC2-207ENST00000549757 WDR62O43379 1518 aa9.61□□□□□ -0.87
SMARCC2-207ENST00000549757 FOSBP53539 338 aa9.59□□□□□ -0.87
SMARCC2-207ENST00000549757 CEP164Q9UPV0 1460 aa9.59□□□□□ -0.87
SMARCC2-207ENST00000549757 PTGER2P43116 358 aa9.57□□□□□ -0.88
SMARCC2-207ENST00000549757 PPP4R3BQ5MIZ7 849 aa9.57□□□□□ -0.88
SMARCC2-207ENST00000549757 JPH4Q96JJ6 628 aa9.57□□□□□ -0.88
SMARCC2-207ENST00000549757 SPDYE16A6NNV3 312 aaPredicted RBP9.56□□□□□ -0.88
SMARCC2-207ENST00000549757 ZNF454Q8N9F8 522 aa9.56□□□□□ -0.88
SMARCC2-207ENST00000549757 FANCD2Q9BXW9 1451 aa9.55□□□□□ -0.88
SMARCC2-207ENST00000549757 ARHGEF1Q92888 912 aaKnown RBP9.55□□□□□ -0.88
SMARCC2-207ENST00000549757 PCDHGA10Q9Y5H3 936 aa9.55□□□□□ -0.88
SMARCC2-207ENST00000549757 PHF14O94880 888 aa9.53□□□□□ -0.88
SMARCC2-207ENST00000549757 PBX2P40425 430 aa9.53□□□□□ -0.88
SMARCC2-207ENST00000549757 P3H3Q8IVL6 736 aa9.53□□□□□ -0.88
SMARCC2-207ENST00000549757 TMEM132AQ24JP5 1023 aa9.52□□□□□ -0.89
SMARCC2-207ENST00000549757 BCL2L12Q9HB09 334 aa9.52□□□□□ -0.89
SMARCC2-207ENST00000549757 AXIN2Q9Y2T1 843 aa9.52□□□□□ -0.89
SMARCC2-207ENST00000549757 ZDHHC16Q969W1 377 aa9.51□□□□□ -0.89
SMARCC2-207ENST00000549757 ADAM33Q9BZ11 813 aa9.51□□□□□ -0.89
SMARCC2-207ENST00000549757 ARHGAP33O14559 1287 aa9.5□□□□□ -0.89
SMARCC2-207ENST00000549757 RANGAP1P46060 587 aaPredicted RBP9.5□□□□□ -0.89
SMARCC2-207ENST00000549757 DDX12PQ92771 950 aa9.5□□□□□ -0.89
SMARCC2-207ENST00000549757 CFTRP13569 1480 aa9.5□□□□□ -0.89
SMARCC2-207ENST00000549757 PSEN2P49810 448 aa9.49□□□□□ -0.89
SMARCC2-207ENST00000549757 TOP2AP11388 1531 aaKnown RBP9.49□□□□□ -0.89
SMARCC2-207ENST00000549757 LSM11P83369 360 aaKnown RBP eCLIP9.48□□□□□ -0.89
SMARCC2-207ENST00000549757 TYW1BQ6NUM6 668 aa9.48□□□□□ -0.89
SMARCC2-207ENST00000549757 EPAS1Q99814 870 aa9.48□□□□□ -0.89
SMARCC2-207ENST00000549757 DMRTA1Q5VZB9 504 aa9.47□□□□□ -0.89
SMARCC2-207ENST00000549757 SPNS2Q8IVW8 549 aa9.47□□□□□ -0.89
SMARCC2-207ENST00000549757 FBXW7Q969H0 707 aa9.47□□□□□ -0.89
SMARCC2-207ENST00000549757 PRIM1P49642 420 aaKnown RBP9.46□□□□□ -0.9
SMARCC2-207ENST00000549757 KCNK17Q96T54 332 aa9.46□□□□□ -0.9
SMARCC2-207ENST00000549757 RSF1Q96T23 1441 aaPredicted RBP9.46□□□□□ -0.9
SMARCC2-207ENST00000549757 URB2Q14146 1524 aaKnown RBP9.46□□□□□ -0.9
SMARCC2-207ENST00000549757 PTPREP23469 700 aa9.44□□□□□ -0.9
SMARCC2-207ENST00000549757 NBR1Q14596 966 aa9.44□□□□□ -0.9
SMARCC2-207ENST00000549757 PRDM2Q13029 1718 aa9.43□□□□□ -0.9
SMARCC2-207ENST00000549757 GRXCR2A6NFK2 248 aa9.43□□□□□ -0.9
SMARCC2-207ENST00000549757 OSBPP22059 807 aa9.43□□□□□ -0.9
SMARCC2-207ENST00000549757 MLLT3P42568 568 aaPredicted RBP9.43□□□□□ -0.9
SMARCC2-207ENST00000549757 EN1Q05925 392 aaPredicted RBP9.43□□□□□ -0.9
SMARCC2-207ENST00000549757 C6orf132Q5T0Z8 1188 aa9.42□□□□□ -0.9
SMARCC2-207ENST00000549757 ANKRD13DQ6ZTN6 518 aa9.42□□□□□ -0.9
SMARCC2-207ENST00000549757 SEMA3EO15041 775 aa9.41□□□□□ -0.9
SMARCC2-207ENST00000549757 PPP1R3GB7ZBB8 358 aa9.4□□□□□ -0.9
SMARCC2-207ENST00000549757 TK2O00142 265 aa9.4□□□□□ -0.9
SMARCC2-207ENST00000549757 COL9A1P20849 921 aa9.4□□□□□ -0.9
SMARCC2-207ENST00000549757 ADGRD1Q6QNK2 874 aa9.4□□□□□ -0.9
SMARCC2-207ENST00000549757 C14orf37Q86TY3 774 aa9.4□□□□□ -0.9
SMARCC2-207ENST00000549757 RBM33Q96EV2 1170 aaKnown RBP9.4□□□□□ -0.9
SMARCC2-207ENST00000549757 ZBED2Q9BTP6 218 aa9.4□□□□□ -0.9
SMARCC2-207ENST00000549757 SLC4A5Q9BY07 1137 aa9.4□□□□□ -0.9
SMARCC2-207ENST00000549757 HRO43593 1189 aa9.39□□□□□ -0.91
SMARCC2-207ENST00000549757 TSR1Q2NL82 804 aaKnown RBP9.39□□□□□ -0.91
SMARCC2-207ENST00000549757 KCNH8Q96L42 1107 aa9.39□□□□□ -0.91
SMARCC2-207ENST00000549757 IFT140Q96RY7 1462 aa9.39□□□□□ -0.91
SMARCC2-207ENST00000549757 MMRN1Q13201 1228 aa9.38□□□□□ -0.91
SMARCC2-207ENST00000549757 PLSCR2Q9NRY7 297 aa9.38□□□□□ -0.91
SMARCC2-207ENST00000549757 PODXL2Q9NZ53 605 aa9.38□□□□□ -0.91
SMARCC2-207ENST00000549757 VPS9D1Q9Y2B5 631 aa9.38□□□□□ -0.91
SMARCC2-207ENST00000549757 RIMBP3CA6NJZ7 1639 aa9.38□□□□□ -0.91
SMARCC2-207ENST00000549757 RIMBP3BA6NNM3 1639 aa9.38□□□□□ -0.91
SMARCC2-207ENST00000549757 RIMBP3Q9UFD9 1639 aa9.38□□□□□ -0.91
SMARCC2-207ENST00000549757 TESPA1A2RU30 521 aaPredicted RBP9.37□□□□□ -0.91
SMARCC2-207ENST00000549757 MAP3K7O43318 606 aa9.37□□□□□ -0.91
SMARCC2-207ENST00000549757 ZNF608Q9ULD9 1512 aaPredicted RBP9.36□□□□□ -0.91
SMARCC2-207ENST00000549757 CCDC88BA6NC98 1476 aa9.36□□□□□ -0.91
SMARCC2-207ENST00000549757 TOPBP1Q92547 1522 aa9.35□□□□□ -0.91
SMARCC2-207ENST00000549757 CDHR5Q9HBB8 845 aa9.34□□□□□ -0.91
SMARCC2-207ENST00000549757 EIF4G3O43432 1585 aaKnown RBP9.33□□□□□ -0.92
SMARCC2-207ENST00000549757 ARHGEF11O15085 1522 aa9.33□□□□□ -0.92
SMARCC2-207ENST00000549757 BHMG1C9JSJ3 638 aaPredicted RBP9.33□□□□□ -0.92
SMARCC2-207ENST00000549757 PROX2Q3B8N5 592 aa9.33□□□□□ -0.92
SMARCC2-207ENST00000549757 ABCC8Q09428 1581 aa9.33□□□□□ -0.92
SMARCC2-207ENST00000549757 DNMBPQ6XZF7 1577 aa9.32□□□□□ -0.92
SMARCC2-207ENST00000549757 NPDC1Q9NQX5 325 aaPredicted RBP9.31□□□□□ -0.92
SMARCC2-207ENST00000549757 MYT1LQ9UL68 1186 aa9.31□□□□□ -0.92
SMARCC2-207ENST00000549757 ONECUT3O60422 494 aaPredicted RBP9.3□□□□□ -0.92
SMARCC2-207ENST00000549757 CHD1O14646 1710 aa9.29□□□□□ -0.92
SMARCC2-207ENST00000549757 TRIM6-TRIM34B2RNG4 842 aa9.29□□□□□ -0.92
SMARCC2-207ENST00000549757 CERKQ8TCT0 537 aa9.29□□□□□ -0.92
SMARCC2-207ENST00000549757 RABGEF1Q9UJ41 708 aa9.29□□□□□ -0.92
SMARCC2-207ENST00000549757 CYB5RLQ6IPT4 315 aa9.28□□□□□ -0.92
SMARCC2-207ENST00000549757 TSKSQ9UJT2 592 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 93 ms