RNA–Protein interactions for RNA: ENST00000548278.1

RITA1-201, Transcript of RBPJ interacting and tubulin associated 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RITA1, Length 2,053 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RITA1-201ENST00000548278 ZNF518AQ6AHZ1 1483 aa29.46■■■□□ 2.31
RITA1-201ENST00000548278 RIMBP3CA6NJZ7 1639 aa29.46■■■□□ 2.31
RITA1-201ENST00000548278 RIMBP3BA6NNM3 1639 aa29.46■■■□□ 2.31
RITA1-201ENST00000548278 RIMBP3Q9UFD9 1639 aa29.46■■■□□ 2.31
RITA1-201ENST00000548278 KIDINS220Q9ULH0 1771 aa29.45■■■□□ 2.31
RITA1-201ENST00000548278 WASHC2AQ641Q2 1341 aa29.45■■■□□ 2.3
RITA1-201ENST00000548278 CYB5RLQ6IPT4 315 aa29.43■■■□□ 2.3
RITA1-201ENST00000548278 DHX29Q7Z478 1369 aaKnown RBP29.43■■■□□ 2.3
RITA1-201ENST00000548278 EIF2AK4Q9P2K8 1649 aaKnown RBP29.42■■■□□ 2.3
RITA1-201ENST00000548278 POGZQ7Z3K3 1410 aa29.41■■■□□ 2.3
RITA1-201ENST00000548278 RALGAPBQ86X10 1494 aa29.4■■■□□ 2.3
RITA1-201ENST00000548278 KDM5CP41229 1560 aa29.4■■■□□ 2.3
RITA1-201ENST00000548278 ZNF326Q5BKZ1 582 aaKnown RBP29.4■■■□□ 2.3
RITA1-201ENST00000548278 MYT1LQ9UL68 1186 aa29.4■■■□□ 2.3
RITA1-201ENST00000548278 VWDEQ8N2E2 1590 aa29.39■■■□□ 2.3
RITA1-201ENST00000548278 E9PCH4 1651 aa29.38■■■□□ 2.29
RITA1-201ENST00000548278 DCAF11Q8TEB1 546 aa29.37■■■□□ 2.29
RITA1-201ENST00000548278 NEO1Q92859 1461 aa29.37■■■□□ 2.29
RITA1-201ENST00000548278 C11orf95C9JLR9 678 aaPredicted RBP29.35■■■□□ 2.29
RITA1-201ENST00000548278 TET3O43151 1660 aa29.34■■■□□ 2.29
RITA1-201ENST00000548278 MROH1Q8NDA8 1641 aa29.34■■■□□ 2.29
RITA1-201ENST00000548278 KIF3BO15066 747 aa29.34■■■□□ 2.29
RITA1-201ENST00000548278 KDM2AQ9Y2K7 1162 aa29.34■■■□□ 2.29
RITA1-201ENST00000548278 PRDM15P57071 1507 aaPredicted RBP29.34■■■□□ 2.29
RITA1-201ENST00000548278 MLH3Q9UHC1 1453 aa29.33■■■□□ 2.29
RITA1-201ENST00000548278 CCDC7Q96M83 1385 aa29.33■■■□□ 2.29
RITA1-201ENST00000548278 MAP3K4Q9Y6R4 1608 aa29.33■■■□□ 2.29
RITA1-201ENST00000548278 SCAF1Q9H7N4 1312 aaKnown RBP29.32■■■□□ 2.28
RITA1-201ENST00000548278 POLR1AO95602 1720 aaPredicted RBP29.32■■■□□ 2.28
RITA1-201ENST00000548278 USP47Q96K76 1375 aa29.32■■■□□ 2.28
RITA1-201ENST00000548278 KANK1Q14678 1352 aa29.31■■■□□ 2.28
RITA1-201ENST00000548278 ANP32CO43423 234 aa29.31■■■□□ 2.28
RITA1-201ENST00000548278 A2MP01023 1474 aa29.3■■■□□ 2.28
RITA1-201ENST00000548278 GLI2P10070 1586 aa29.3■■■□□ 2.28
RITA1-201ENST00000548278 HECW2Q9P2P5 1572 aa29.3■■■□□ 2.28
RITA1-201ENST00000548278 PTPRTO14522 1441 aa29.29■■■□□ 2.28
RITA1-201ENST00000548278 PRAG1Q86YV5 1406 aa29.28■■■□□ 2.28
RITA1-201ENST00000548278 TRPM2O94759 1503 aa29.28■■■□□ 2.28
RITA1-201ENST00000548278 RGL3Q3MIN7 710 aa29.27■■■□□ 2.28
RITA1-201ENST00000548278 SPHKAPQ2M3C7 1700 aa29.27■■■□□ 2.28
RITA1-201ENST00000548278 CCER2I3L3R5 266 aa29.24■■■□□ 2.27
RITA1-201ENST00000548278 FRMPD1Q5SYB0 1578 aa29.24■■■□□ 2.27
RITA1-201ENST00000548278 CARD11Q9BXL7 1154 aa29.24■■■□□ 2.27
RITA1-201ENST00000548278 TRPM1Q7Z4N2 1603 aa29.24■■■□□ 2.27
RITA1-201ENST00000548278 RNF17Q9BXT8 1623 aaKnown RBP29.24■■■□□ 2.27
RITA1-201ENST00000548278 KIF7Q2M1P5 1343 aa29.23■■■□□ 2.27
RITA1-201ENST00000548278 CNTLNQ9NXG0 1405 aa29.23■■■□□ 2.27
RITA1-201ENST00000548278 BCORL1Q5H9F3 1711 aa29.22■■■□□ 2.27
RITA1-201ENST00000548278 ABCA6Q8N139 1617 aa29.21■■■□□ 2.27
RITA1-201ENST00000548278 RAPGEF3O95398 923 aa29.19■■■□□ 2.26
RITA1-201ENST00000548278 CEP152O94986 1710 aa29.18■■■□□ 2.26
RITA1-201ENST00000548278 RICTORQ6R327 1708 aa29.18■■■□□ 2.26
RITA1-201ENST00000548278 LMTK2Q8IWU2 1503 aa29.18■■■□□ 2.26
RITA1-201ENST00000548278 ROCK2O75116 1388 aaKnown RBP29.18■■■□□ 2.26
RITA1-201ENST00000548278 CLTCL1P53675 1640 aa29.18■■■□□ 2.26
RITA1-201ENST00000548278 EFCAB6Q5THR3 1501 aa29.17■■■□□ 2.26
RITA1-201ENST00000548278 DIP2BQ9P265 1576 aa29.17■■■□□ 2.26
RITA1-201ENST00000548278 GPRASP1Q5JY77 1395 aa29.14■■■□□ 2.26
RITA1-201ENST00000548278 PPRC1Q5VV67 1664 aaKnown RBP29.13■■■□□ 2.25
RITA1-201ENST00000548278 ARID4BQ4LE39 1312 aaPredicted RBP29.11■■■□□ 2.25
RITA1-201ENST00000548278 FAM69CQ0P6D2 419 aa29.11■■■□□ 2.25
RITA1-201ENST00000548278 DIP2CQ9Y2E4 1556 aa29.11■■■□□ 2.25
RITA1-201ENST00000548278 LAMC1P11047 1609 aa29.11■■■□□ 2.25
RITA1-201ENST00000548278 NBPF1Q3BBV0 1214 aa29.08■■■□□ 2.25
RITA1-201ENST00000548278 ST20-MTHFSA0A0A6YYL1 179 aa29.08■■■□□ 2.25
RITA1-201ENST00000548278 NEURL4Q96JN8 1562 aa29.07■■■□□ 2.24
RITA1-201ENST00000548278 GTF3C3Q9Y5Q9 886 aa29.06■■■□□ 2.24
RITA1-201ENST00000548278 MADDQ8WXG6 1647 aa29.04■■■□□ 2.24
RITA1-201ENST00000548278 GGT6Q6P531 493 aa29.03■■■□□ 2.24
RITA1-201ENST00000548278 STAC3Q96MF2 364 aa29.03■■■□□ 2.24
RITA1-201ENST00000548278 UGGT1Q9NYU2 1555 aa29.01■■■□□ 2.24
RITA1-201ENST00000548278 ABCC3O15438 1527 aa29.01■■■□□ 2.23
RITA1-201ENST00000548278 YEATS2Q9ULM3 1422 aa29■■■□□ 2.23
RITA1-201ENST00000548278 NPATQ14207 1427 aa28.99■■■□□ 2.23
RITA1-201ENST00000548278 ZMYM4Q5VZL5 1548 aa28.99■■■□□ 2.23
RITA1-201ENST00000548278 TSPOAP1O95153 1857 aa28.99■■■□□ 2.23
RITA1-201ENST00000548278 KIF1BO60333 1816 aa28.98■■■□□ 2.23
RITA1-201ENST00000548278 PRKRIP1Q9H875 184 aaPredicted RBP28.97■■■□□ 2.23
RITA1-201ENST00000548278 WASHC2CQ9Y4E1 1318 aa28.95■■■□□ 2.22
RITA1-201ENST00000548278 POLR3GLQ9BT43 218 aa28.94■■■□□ 2.22
RITA1-201ENST00000548278 CAMSAP1Q5T5Y3 1602 aa28.93■■■□□ 2.22
RITA1-201ENST00000548278 CFAP65Q6ZU64 1925 aaKnown RBP28.9■■■□□ 2.22
RITA1-201ENST00000548278 MROH2AA6NES4 1674 aa28.9■■■□□ 2.22
RITA1-201ENST00000548278 MYOM2P54296 1465 aa28.89■■■□□ 2.22
RITA1-201ENST00000548278 IFT172Q9UG01 1749 aa28.88■■■□□ 2.21
RITA1-201ENST00000548278 ADGRB3O60242 1522 aa28.88■■■□□ 2.21
RITA1-201ENST00000548278 TESK2Q96S53 571 aa28.87■■■□□ 2.21
RITA1-201ENST00000548278 ZC3H13Q5T200 1668 aaKnown RBP28.87■■■□□ 2.21
RITA1-201ENST00000548278 KIF13AQ9H1H9 1805 aa28.87■■■□□ 2.21
RITA1-201ENST00000548278 KIAA1210Q9ULL0 1709 aa28.87■■■□□ 2.21
RITA1-201ENST00000548278 IQGAP1P46940 1657 aa28.86■■■□□ 2.21
RITA1-201ENST00000548278 SIGLEC1Q9BZZ2 1709 aa28.85■■■□□ 2.21
RITA1-201ENST00000548278 NOS1P29475 1434 aa28.85■■■□□ 2.21
RITA1-201ENST00000548278 COL17A1Q9UMD9 1497 aaPredicted RBP28.85■■■□□ 2.21
RITA1-201ENST00000548278 ARHGAP31Q2M1Z3 1444 aa28.84■■■□□ 2.21
RITA1-201ENST00000548278 CCDC184Q52MB2 194 aa28.81■■■□□ 2.2
RITA1-201ENST00000548278 NRXN1Q9ULB1 1477 aa28.8■■■□□ 2.2
RITA1-201ENST00000548278 SCAF11Q99590 1463 aaKnown RBP28.79■■■□□ 2.2
RITA1-201ENST00000548278 REREQ9P2R6 1566 aa28.79■■■□□ 2.2
RITA1-201ENST00000548278 DISP3Q9P2K9 1392 aa28.79■■■□□ 2.2
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms