RNA–Protein interactions for RNA: ENST00000547555.5

LETMD1-210, Transcript of LETM1 domain containing 1, humanhuman

TSL 5

Gene LETMD1, Length 1,658 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-210ENST00000547555 ANP32EQ9BTT0 268 aa24.21■■□□□ 1.47
LETMD1-210ENST00000547555 KIF15Q9NS87 1388 aa24.2■■□□□ 1.47
LETMD1-210ENST00000547555 DUOX2Q9NRD8 1548 aa24.2■■□□□ 1.46
LETMD1-210ENST00000547555 GCC2Q8IWJ2 1684 aa24.19■■□□□ 1.46
LETMD1-210ENST00000547555 BCORL1Q5H9F3 1711 aa24.18■■□□□ 1.46
LETMD1-210ENST00000547555 TSHZ2Q9NRE2 1034 aa24.18■■□□□ 1.46
LETMD1-210ENST00000547555 AGLP35573 1532 aa24.17■■□□□ 1.46
LETMD1-210ENST00000547555 DHX29Q7Z478 1369 aaKnown RBP24.16■■□□□ 1.46
LETMD1-210ENST00000547555 EIF2AK4Q9P2K8 1649 aaKnown RBP24.16■■□□□ 1.46
LETMD1-210ENST00000547555 HFM1A2PYH4 1435 aa24.14■■□□□ 1.46
LETMD1-210ENST00000547555 RRP7BPQ9NSQ0 103 aa24.14■■□□□ 1.45
LETMD1-210ENST00000547555 ERBINQ96RT1 1412 aa24.14■■□□□ 1.45
LETMD1-210ENST00000547555 NAIPQ13075 1403 aa24.12■■□□□ 1.45
LETMD1-210ENST00000547555 ANKRD50Q9ULJ7 1429 aa24.1■■□□□ 1.45
LETMD1-210ENST00000547555 RNF17Q9BXT8 1623 aaKnown RBP24.08■■□□□ 1.45
LETMD1-210ENST00000547555 CCER2I3L3R5 266 aa24.08■■□□□ 1.44
LETMD1-210ENST00000547555 DEPDC5O75140 1603 aa24.06■■□□□ 1.44
LETMD1-210ENST00000547555 SETD5Q9C0A6 1442 aa24.06■■□□□ 1.44
LETMD1-210ENST00000547555 MROH1Q8NDA8 1641 aa24.03■■□□□ 1.44
LETMD1-210ENST00000547555 RAB3GAP2Q9H2M9 1393 aa24.02■■□□□ 1.44
LETMD1-210ENST00000547555 UNC13BO14795 1591 aa24.01■■□□□ 1.43
LETMD1-210ENST00000547555 PRDM15P57071 1507 aaPredicted RBP24.01■■□□□ 1.43
LETMD1-210ENST00000547555 KIF3BO15066 747 aa23.99■■□□□ 1.43
LETMD1-210ENST00000547555 ARID4BQ4LE39 1312 aaPredicted RBP23.97■■□□□ 1.43
LETMD1-210ENST00000547555 ADAMTSL3P82987 1691 aa23.97■■□□□ 1.43
LETMD1-210ENST00000547555 FAM135AQ9P2D6 1515 aa23.97■■□□□ 1.43
LETMD1-210ENST00000547555 VWDEQ8N2E2 1590 aa23.95■■□□□ 1.42
LETMD1-210ENST00000547555 FER1L4A9Z1Z3 1794 aa23.93■■□□□ 1.42
LETMD1-210ENST00000547555 ZC3H13Q5T200 1668 aaKnown RBP23.93■■□□□ 1.42
LETMD1-210ENST00000547555 KDM5DQ9BY66 1539 aa23.93■■□□□ 1.42
LETMD1-210ENST00000547555 NEFLP07196 543 aa23.92■■□□□ 1.42
LETMD1-210ENST00000547555 IQGAP3Q86VI3 1631 aa23.91■■□□□ 1.42
LETMD1-210ENST00000547555 PPP6R1Q9UPN7 881 aa23.9■■□□□ 1.42
LETMD1-210ENST00000547555 MADDQ8WXG6 1647 aa23.9■■□□□ 1.42
LETMD1-210ENST00000547555 CEP152O94986 1710 aa23.89■■□□□ 1.42
LETMD1-210ENST00000547555 GGT6Q6P531 493 aa23.89■■□□□ 1.42
LETMD1-210ENST00000547555 MLECQ14165 292 aa23.88■■□□□ 1.41
LETMD1-210ENST00000547555 ABCC3O15438 1527 aa23.88■■□□□ 1.41
LETMD1-210ENST00000547555 MROH2AA6NES4 1674 aa23.87■■□□□ 1.41
LETMD1-210ENST00000547555 CLTCQ00610 1675 aaKnown RBP23.87■■□□□ 1.41
LETMD1-210ENST00000547555 LMTK2Q8IWU2 1503 aa23.87■■□□□ 1.41
LETMD1-210ENST00000547555 PPP1R15AO75807 674 aaPredicted RBP23.87■■□□□ 1.41
LETMD1-210ENST00000547555 CNTLNQ9NXG0 1405 aa23.84■■□□□ 1.41
LETMD1-210ENST00000547555 KANK1Q14678 1352 aa23.84■■□□□ 1.41
LETMD1-210ENST00000547555 ERICH6BQ5W0A0 696 aa23.84■■□□□ 1.41
LETMD1-210ENST00000547555 RIMS1Q86UR5 1692 aaKnown RBP23.84■■□□□ 1.41
LETMD1-210ENST00000547555 TET3O43151 1660 aa23.83■■□□□ 1.41
LETMD1-210ENST00000547555 CAMSAP1Q5T5Y3 1602 aa23.83■■□□□ 1.41
LETMD1-210ENST00000547555 NUP155O75694 1391 aa23.81■■□□□ 1.4
LETMD1-210ENST00000547555 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.81■■□□□ 1.43e-14■□□□□ 10.9
LETMD1-210ENST00000547555 PZPP20742 1482 aa23.81■■□□□ 1.4
LETMD1-210ENST00000547555 EFCAB6Q5THR3 1501 aa23.8■■□□□ 1.4
LETMD1-210ENST00000547555 WASHC2CQ9Y4E1 1318 aa23.79■■□□□ 1.4
LETMD1-210ENST00000547555 C3P01024 1663 aa23.77■■□□□ 1.4
LETMD1-210ENST00000547555 KDM4FA0A1W2PPD8 638 aa23.76■■□□□ 1.39
LETMD1-210ENST00000547555 ANP32CO43423 234 aa23.76■■□□□ 1.39
LETMD1-210ENST00000547555 FKBP8Q14318 412 aa23.76■■□□□ 1.39
LETMD1-210ENST00000547555 ARHGAP31Q2M1Z3 1444 aa23.76■■□□□ 1.39
LETMD1-210ENST00000547555 E9PCH4 1651 aa23.75■■□□□ 1.39
LETMD1-210ENST00000547555 TRIM52Q96A61 297 aa23.75■■□□□ 1.39
LETMD1-210ENST00000547555 ESF1Q9H501 851 aaKnown RBP23.75■■□□□ 1.39
LETMD1-210ENST00000547555 ZMYM3Q14202 1370 aa23.72■■□□□ 1.39
LETMD1-210ENST00000547555 PTPRMP28827 1452 aa23.72■■□□□ 1.39
LETMD1-210ENST00000547555 RPRD2Q5VT52 1461 aaKnown RBP23.72■■□□□ 1.39
LETMD1-210ENST00000547555 NPATQ14207 1427 aa23.71■■□□□ 1.39
LETMD1-210ENST00000547555 RBM19Q9Y4C8 960 aaKnown RBP23.69■■□□□ 1.38
LETMD1-210ENST00000547555 PREX1Q8TCU6 1659 aa23.69■■□□□ 1.38
LETMD1-210ENST00000547555 DDX10Q13206 875 aaKnown RBP23.68■■□□□ 1.38
LETMD1-210ENST00000547555 FANCIQ9NVI1 1328 aa23.68■■□□□ 1.38
LETMD1-210ENST00000547555 CFAP65Q6ZU64 1925 aaKnown RBP23.67■■□□□ 1.38
LETMD1-210ENST00000547555 MPHOSPH9Q99550 1183 aa23.67■■□□□ 1.38
LETMD1-210ENST00000547555 SLC4A1APQ9BWU0 796 aaKnown RBP23.67■■□□□ 1.38
LETMD1-210ENST00000547555 SPATA31D1Q6ZQQ2 1576 aa23.66■■□□□ 1.38
LETMD1-210ENST00000547555 ERVK-7P63135 1459 aa23.65■■□□□ 1.38
LETMD1-210ENST00000547555 SPHKAPQ2M3C7 1700 aa23.64■■□□□ 1.38
LETMD1-210ENST00000547555 NOS1P29475 1434 aa23.63■■□□□ 1.37
LETMD1-210ENST00000547555 PKD2Q13563 968 aa23.61■■□□□ 1.37
LETMD1-210ENST00000547555 CEBPAP49715 358 aaPredicted RBP23.6■■□□□ 1.37
LETMD1-210ENST00000547555 BCL11AQ9H165 835 aa23.6■■□□□ 1.37
LETMD1-210ENST00000547555 SYNMO15061 1565 aa23.6■■□□□ 1.37
LETMD1-210ENST00000547555 PTPRTO14522 1441 aa23.6■■□□□ 1.37
LETMD1-210ENST00000547555 SETD1BQ9UPS6 1966 aaKnown RBP23.6■■□□□ 1.37
LETMD1-210ENST00000547555 FBXO31Q5XUX0 539 aaPredicted RBP23.57■■□□□ 1.36
LETMD1-210ENST00000547555 TRPM2O94759 1503 aa23.57■■□□□ 1.36
LETMD1-210ENST00000547555 PIK3C2BO00750 1634 aa23.56■■□□□ 1.36
LETMD1-210ENST00000547555 TONSLQ96HA7 1378 aa23.56■■□□□ 1.36
LETMD1-210ENST00000547555 PLA2R1Q13018 1463 aa23.56■■□□□ 1.36
LETMD1-210ENST00000547555 MYO3AQ8NEV4 1616 aa23.54■■□□□ 1.36
LETMD1-210ENST00000547555 TNRQ92752 1358 aa23.54■■□□□ 1.36
LETMD1-210ENST00000547555 FOXD1Q16676 465 aa23.53■■□□□ 1.36
LETMD1-210ENST00000547555 SIN3AQ96ST3 1273 aa23.51■■□□□ 1.35
LETMD1-210ENST00000547555 ZNF142P52746 1687 aaPredicted RBP23.51■■□□□ 1.35
LETMD1-210ENST00000547555 ANKRD30BQ9BXX2 1392 aa23.5■■□□□ 1.35
LETMD1-210ENST00000547555 NLRP1Q9C000 1473 aa23.5■■□□□ 1.35
LETMD1-210ENST00000547555 CLTCL1P53675 1640 aa23.5■■□□□ 1.35
LETMD1-210ENST00000547555 PLPPR3Q6T4P5 718 aa23.5■■□□□ 1.35
LETMD1-210ENST00000547555 UGGT1Q9NYU2 1555 aa23.49■■□□□ 1.35
LETMD1-210ENST00000547555 KDM5AP29375 1690 aaKnown RBP23.47■■□□□ 1.35
LETMD1-210ENST00000547555 CEP170BQ9Y4F5 1589 aaPredicted RBP23.45■■□□□ 1.34
LETMD1-210ENST00000547555 BCANQ96GW7 911 aa23.45■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms