RNA–Protein interactions for RNA: ENST00000545894.1

DDB1-224, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 2,282 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-224ENST00000545894 ATP7AQ04656 1500 aa16■□□□□ 0.15
DDB1-224ENST00000545894 INO80Q9ULG1 1556 aaPredicted RBP16■□□□□ 0.15
DDB1-224ENST00000545894 MAGI2Q86UL8 1455 aa15.99■□□□□ 0.15
DDB1-224ENST00000545894 KIDINS220Q9ULH0 1771 aa15.99■□□□□ 0.15
DDB1-224ENST00000545894 RRP7BPQ9NSQ0 103 aa15.99■□□□□ 0.15
DDB1-224ENST00000545894 NCOA1Q15788 1441 aa15.99■□□□□ 0.15
DDB1-224ENST00000545894 ADGRL2O95490 1459 aa15.98■□□□□ 0.15
DDB1-224ENST00000545894 ANKRD30AQ9BXX3 1397 aa15.98■□□□□ 0.15
DDB1-224ENST00000545894 ROCK1Q13464 1354 aa15.97■□□□□ 0.15
DDB1-224ENST00000545894 RBM19Q9Y4C8 960 aaKnown RBP15.96■□□□□ 0.15
DDB1-224ENST00000545894 ABCA6Q8N139 1617 aa15.95■□□□□ 0.14
DDB1-224ENST00000545894 KIF15Q9NS87 1388 aa15.95■□□□□ 0.14
DDB1-224ENST00000545894 DIP2CQ9Y2E4 1556 aa15.95■□□□□ 0.14
DDB1-224ENST00000545894 ADGBQ8N7X0 1667 aa15.93■□□□□ 0.14
DDB1-224ENST00000545894 PLXNC1O60486 1568 aa15.93■□□□□ 0.14
DDB1-224ENST00000545894 ATP10AO60312 1499 aa15.93■□□□□ 0.14
DDB1-224ENST00000545894 ARHGEF40Q8TER5 1519 aa15.93■□□□□ 0.14
DDB1-224ENST00000545894 DHX29Q7Z478 1369 aaKnown RBP15.92■□□□□ 0.14
DDB1-224ENST00000545894 A2MP01023 1474 aa15.91■□□□□ 0.14
DDB1-224ENST00000545894 DUOX2Q9NRD8 1548 aa15.89■□□□□ 0.13
DDB1-224ENST00000545894 HNRNPUQ00839 825 aaKnown RBP eCLIP15.89■□□□□ 0.13
DDB1-224ENST00000545894 ANKRD50Q9ULJ7 1429 aa15.87■□□□□ 0.13
DDB1-224ENST00000545894 HSPA5P11021 654 aaKnown RBP15.87■□□□□ 0.13
DDB1-224ENST00000545894 WASHC2AQ641Q2 1341 aa15.87■□□□□ 0.13
DDB1-224ENST00000545894 SIGLEC1Q9BZZ2 1709 aa15.86■□□□□ 0.13
DDB1-224ENST00000545894 REREQ9P2R6 1566 aa15.86■□□□□ 0.13
DDB1-224ENST00000545894 GCC2Q8IWJ2 1684 aa15.86■□□□□ 0.13
DDB1-224ENST00000545894 ERBINQ96RT1 1412 aa15.86■□□□□ 0.13
DDB1-224ENST00000545894 KIF3BO15066 747 aa15.84■□□□□ 0.13
DDB1-224ENST00000545894 ARID4BQ4LE39 1312 aaPredicted RBP15.83■□□□□ 0.13
DDB1-224ENST00000545894 EIF4G2P78344 907 aaKnown RBP eCLIP15.83■□□□□ 0.13
DDB1-224ENST00000545894 AGLP35573 1532 aa15.82■□□□□ 0.12
DDB1-224ENST00000545894 CNTLNQ9NXG0 1405 aa15.81■□□□□ 0.12
DDB1-224ENST00000545894 MLECQ14165 292 aa15.8■□□□□ 0.12
DDB1-224ENST00000545894 ERICH6BQ5W0A0 696 aa15.8■□□□□ 0.12
DDB1-224ENST00000545894 GGT6Q6P531 493 aa15.8■□□□□ 0.12
DDB1-224ENST00000545894 EIF2AK4Q9P2K8 1649 aaKnown RBP15.8■□□□□ 0.12
DDB1-224ENST00000545894 MPHOSPH9Q99550 1183 aa15.78■□□□□ 0.12
DDB1-224ENST00000545894 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.78■□□□□ 0.12
DDB1-224ENST00000545894 BCORL1Q5H9F3 1711 aa15.77■□□□□ 0.12
DDB1-224ENST00000545894 IRX6P78412 446 aaPredicted RBP15.77■□□□□ 0.11
DDB1-224ENST00000545894 L3MBTL2Q969R5 705 aa15.76■□□□□ 0.11
DDB1-224ENST00000545894 FANCIQ9NVI1 1328 aa15.76■□□□□ 0.11
DDB1-224ENST00000545894 MROH1Q8NDA8 1641 aa15.76■□□□□ 0.11
DDB1-224ENST00000545894 RNF17Q9BXT8 1623 aaKnown RBP15.75■□□□□ 0.11
DDB1-224ENST00000545894 CCDC7Q96M83 1385 aa15.75■□□□□ 0.11
DDB1-224ENST00000545894 NUP155O75694 1391 aa15.74■□□□□ 0.11
DDB1-224ENST00000545894 DEPDC5O75140 1603 aa15.74■□□□□ 0.11
DDB1-224ENST00000545894 MSH5O43196 834 aa15.74■□□□□ 0.11
DDB1-224ENST00000545894 UNC13BO14795 1591 aa15.73■□□□□ 0.11
DDB1-224ENST00000545894 PRKRIP1Q9H875 184 aaPredicted RBP15.73■□□□□ 0.11
DDB1-224ENST00000545894 CCDC184Q52MB2 194 aa15.73■□□□□ 0.11
DDB1-224ENST00000545894 PPP4R2Q9NY27 417 aa15.73■□□□□ 0.11
DDB1-224ENST00000545894 PRDM15P57071 1507 aaPredicted RBP15.72■□□□□ 0.11
DDB1-224ENST00000545894 C11orf95C9JLR9 678 aaPredicted RBP15.71■□□□□ 0.11
DDB1-224ENST00000545894 KANK1Q14678 1352 aa15.71■□□□□ 0.11
DDB1-224ENST00000545894 WASHC2CQ9Y4E1 1318 aa15.71■□□□□ 0.11
DDB1-224ENST00000545894 PPP6R1Q9UPN7 881 aa15.71■□□□□ 0.11
DDB1-224ENST00000545894 VWDEQ8N2E2 1590 aa15.71■□□□□ 0.1
DDB1-224ENST00000545894 RPRD2Q5VT52 1461 aaKnown RBP15.7■□□□□ 0.1
DDB1-224ENST00000545894 ANKRD30BQ9BXX2 1392 aa15.7■□□□□ 0.1
DDB1-224ENST00000545894 FOXD1Q16676 465 aa15.69■□□□□ 0.1
DDB1-224ENST00000545894 ZBED9Q6R2W3 1325 aa15.69■□□□□ 0.1
DDB1-224ENST00000545894 KDM5DQ9BY66 1539 aa15.69■□□□□ 0.1
DDB1-224ENST00000545894 MRS2Q9HD23 443 aa15.69■□□□□ 0.1
DDB1-224ENST00000545894 ABCC3O15438 1527 aa15.68■□□□□ 0.1
DDB1-224ENST00000545894 PZPP20742 1482 aa15.68■□□□□ 0.1
DDB1-224ENST00000545894 FAM9BQ8IZU0 186 aa15.68■□□□□ 0.1
DDB1-224ENST00000545894 FAM135AQ9P2D6 1515 aa15.67■□□□□ 0.1
DDB1-224ENST00000545894 NBPF8Q3BBV2 869 aa15.67■□□□□ 0.1
DDB1-224ENST00000545894 BCL11AQ9H165 835 aa15.67■□□□□ 0.1
DDB1-224ENST00000545894 ESF1Q9H501 851 aaKnown RBP15.67■□□□□ 0.1
DDB1-224ENST00000545894 IQGAP3Q86VI3 1631 aa15.67■□□□□ 0.1
DDB1-224ENST00000545894 ADAMTSL3P82987 1691 aa15.66■□□□□ 0.1
DDB1-224ENST00000545894 SLC4A1APQ9BWU0 796 aaKnown RBP15.66■□□□□ 0.1
DDB1-224ENST00000545894 LMTK2Q8IWU2 1503 aa15.66■□□□□ 0.1
DDB1-224ENST00000545894 KDM4FA0A1W2PPD8 638 aa15.65■□□□□ 0.1
DDB1-224ENST00000545894 SPATA31E1Q6ZUB1 1445 aa15.65■□□□□ 0.1
DDB1-224ENST00000545894 CEP152O94986 1710 aa15.65■□□□□ 0.1
DDB1-224ENST00000545894 MADDQ8WXG6 1647 aa15.65■□□□□ 0.1
DDB1-224ENST00000545894 KIF7Q2M1P5 1343 aa15.64■□□□□ 0.1
DDB1-224ENST00000545894 CLTCQ00610 1675 aaKnown RBP15.64■□□□□ 0.09
DDB1-224ENST00000545894 ZMYM3Q14202 1370 aa15.63■□□□□ 0.09
DDB1-224ENST00000545894 PKD2Q13563 968 aa15.63■□□□□ 0.09
DDB1-224ENST00000545894 ERICH6Q7L0X2 663 aa15.63■□□□□ 0.09
DDB1-224ENST00000545894 ZC3H13Q5T200 1668 aaKnown RBP15.62■□□□□ 0.09
DDB1-224ENST00000545894 FER1L4A9Z1Z3 1794 aa15.62■□□□□ 0.09
DDB1-224ENST00000545894 POLR1AO95602 1720 aaPredicted RBP15.62■□□□□ 0.09
DDB1-224ENST00000545894 CEBPAP49715 358 aaPredicted RBP15.61■□□□□ 0.09
DDB1-224ENST00000545894 CAMSAP1Q5T5Y3 1602 aa15.61■□□□□ 0.09
DDB1-224ENST00000545894 TET3O43151 1660 aa15.61■□□□□ 0.09
DDB1-224ENST00000545894 EFCAB6Q5THR3 1501 aa15.6■□□□□ 0.09
DDB1-224ENST00000545894 NPATQ14207 1427 aa15.6■□□□□ 0.09
DDB1-224ENST00000545894 RIMS1Q86UR5 1692 aaKnown RBP15.6■□□□□ 0.09
DDB1-224ENST00000545894 ARHGAP31Q2M1Z3 1444 aa15.6■□□□□ 0.09
DDB1-224ENST00000545894 FBXO31Q5XUX0 539 aaPredicted RBP15.59■□□□□ 0.09
DDB1-224ENST00000545894 PLPPR3Q6T4P5 718 aa15.59■□□□□ 0.09
DDB1-224ENST00000545894 B4GALNT3Q6L9W6 998 aa15.59■□□□□ 0.09
DDB1-224ENST00000545894 MROH2AA6NES4 1674 aa15.58■□□□□ 0.08
DDB1-224ENST00000545894 E9PCH4 1651 aa15.58■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 80.7 ms