RNA–Protein interactions for RNA: ENST00000545668.5

DDX11-229, Transcript of DEAD/H-box helicase 11, humanhuman

TSL 1 (best) BASIC

Gene DDX11, Length 3,751 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11-229ENST00000545668 CCDC7Q96M83 1385 aa13.28□□□□□ -0.28
DDX11-229ENST00000545668 MYT1LQ9UL68 1186 aa13.27□□□□□ -0.28
DDX11-229ENST00000545668 MRS2Q9HD23 443 aa13.27□□□□□ -0.29
DDX11-229ENST00000545668 KDM5DQ9BY66 1539 aa13.27□□□□□ -0.29
DDX11-229ENST00000545668 OSCARQ8IYS5 282 aa13.26□□□□□ -0.29
DDX11-229ENST00000545668 FAM135AQ9P2D6 1515 aa13.26□□□□□ -0.29
DDX11-229ENST00000545668 ARHGEF12Q9NZN5 1544 aa13.25□□□□□ -0.29
DDX11-229ENST00000545668 RGL3Q3MIN7 710 aa13.25□□□□□ -0.29
DDX11-229ENST00000545668 AFAP1Q8N556 730 aa13.25□□□□□ -0.29
DDX11-229ENST00000545668 CARD11Q9BXL7 1154 aa13.25□□□□□ -0.29
DDX11-229ENST00000545668 SPAG9O60271 1321 aaKnown RBP13.25□□□□□ -0.29
DDX11-229ENST00000545668 USP47Q96K76 1375 aa13.25□□□□□ -0.29
DDX11-229ENST00000545668 KIF7Q2M1P5 1343 aa13.25□□□□□ -0.29
DDX11-229ENST00000545668 CCDC144AA2RUR9 1427 aa13.24□□□□□ -0.29
DDX11-229ENST00000545668 NPM1P06748 294 aaKnown RBP eCLIP13.24□□□□□ -0.29
DDX11-229ENST00000545668 SPATA31E1Q6ZUB1 1445 aa13.24□□□□□ -0.29
DDX11-229ENST00000545668 CNTLNQ9NXG0 1405 aa13.24□□□□□ -0.29
DDX11-229ENST00000545668 MAST1Q9Y2H9 1570 aa13.23□□□□□ -0.29
DDX11-229ENST00000545668 TRAPPC8Q9Y2L5 1435 aa13.23□□□□□ -0.29
DDX11-229ENST00000545668 B4GALNT3Q6L9W6 998 aa13.23□□□□□ -0.29
DDX11-229ENST00000545668 WDR7Q9Y4E6 1490 aa13.22□□□□□ -0.29
DDX11-229ENST00000545668 SALL2Q9Y467 1007 aaPredicted RBP13.22□□□□□ -0.29
DDX11-229ENST00000545668 DUOX2Q9NRD8 1548 aa13.21□□□□□ -0.29
DDX11-229ENST00000545668 ABCC1P33527 1531 aa13.2□□□□□ -0.3
DDX11-229ENST00000545668 PLXNC1O60486 1568 aa13.2□□□□□ -0.3
DDX11-229ENST00000545668 ERBINQ96RT1 1412 aa13.19□□□□□ -0.3
DDX11-229ENST00000545668 UHRF1BP1Q6BDS2 1440 aa13.19□□□□□ -0.3
DDX11-229ENST00000545668 PRKRIP1Q9H875 184 aaPredicted RBP13.19□□□□□ -0.3
DDX11-229ENST00000545668 ROCK2O75116 1388 aaKnown RBP13.18□□□□□ -0.3
DDX11-229ENST00000545668 FANCAO15360 1455 aa13.18□□□□□ -0.3
DDX11-229ENST00000545668 ASXL2Q76L83 1435 aa13.17□□□□□ -0.3
DDX11-229ENST00000545668 ST20-MTHFSA0A0A6YYL1 179 aa13.17□□□□□ -0.3
DDX11-229ENST00000545668 RALGAPBQ86X10 1494 aa13.17□□□□□ -0.3
DDX11-229ENST00000545668 UNC13BO14795 1591 aa13.16□□□□□ -0.3
DDX11-229ENST00000545668 SCAPERQ9BY12 1400 aa13.15□□□□□ -0.3
DDX11-229ENST00000545668 PLA2R1Q13018 1463 aa13.15□□□□□ -0.3
DDX11-229ENST00000545668 ARAP3Q8WWN8 1544 aa13.14□□□□□ -0.31
DDX11-229ENST00000545668 RTEL1-TNFRSF6BF6WH68 1400 aa13.14□□□□□ -0.31
DDX11-229ENST00000545668 KIF3BO15066 747 aa13.14□□□□□ -0.31
DDX11-229ENST00000545668 ARID4BQ4LE39 1312 aaPredicted RBP13.14□□□□□ -0.31
DDX11-229ENST00000545668 CCDC184Q52MB2 194 aa13.14□□□□□ -0.31
DDX11-229ENST00000545668 ADGRL1O94910 1474 aa13.13□□□□□ -0.31
DDX11-229ENST00000545668 IQGAP3Q86VI3 1631 aa13.13□□□□□ -0.31
DDX11-229ENST00000545668 NPM2Q86SE8 214 aaKnown RBP13.12□□□□□ -0.31
DDX11-229ENST00000545668 KDM5CP41229 1560 aa13.12□□□□□ -0.31
DDX11-229ENST00000545668 NBPF1Q3BBV0 1214 aa13.12□□□□□ -0.31
DDX11-229ENST00000545668 KANK1Q14678 1352 aa13.11□□□□□ -0.31
DDX11-229ENST00000545668 PRAG1Q86YV5 1406 aa13.11□□□□□ -0.31
DDX11-229ENST00000545668 ZFYVE16Q7Z3T8 1539 aa13.1□□□□□ -0.31
DDX11-229ENST00000545668 MAGI2Q86UL8 1455 aa13.1□□□□□ -0.31
DDX11-229ENST00000545668 ABCA9Q8IUA7 1624 aa13.1□□□□□ -0.31
DDX11-229ENST00000545668 BCORL1Q5H9F3 1711 aa13.09□□□□□ -0.31
DDX11-229ENST00000545668 A2MP01023 1474 aa13.09□□□□□ -0.31
DDX11-229ENST00000545668 PPP4R2Q9NY27 417 aa13.09□□□□□ -0.31
DDX11-229ENST00000545668 ATP7AQ04656 1500 aa13.08□□□□□ -0.32
DDX11-229ENST00000545668 ATP10AO60312 1499 aa13.07□□□□□ -0.32
DDX11-229ENST00000545668 POLR1AO95602 1720 aaPredicted RBP13.07□□□□□ -0.32
DDX11-229ENST00000545668 TMC1Q8TDI8 760 aa13.06□□□□□ -0.32
DDX11-229ENST00000545668 DHX29Q7Z478 1369 aaKnown RBP13.06□□□□□ -0.32
DDX11-229ENST00000545668 CD109Q6YHK3 1445 aa13.06□□□□□ -0.32
DDX11-229ENST00000545668 MSH5O43196 834 aa13.04□□□□□ -0.32
DDX11-229ENST00000545668 ZNF518AQ6AHZ1 1483 aa13.02□□□□□ -0.32
DDX11-229ENST00000545668 INO80Q9ULG1 1556 aaPredicted RBP13.02□□□□□ -0.32
DDX11-229ENST00000545668 GPRASP1Q5JY77 1395 aa13.02□□□□□ -0.32
DDX11-229ENST00000545668 TRPM1Q7Z4N2 1603 aa13.02□□□□□ -0.33
DDX11-229ENST00000545668 GGT6Q6P531 493 aa13.01□□□□□ -0.33
DDX11-229ENST00000545668 ANP32AP39687 249 aaKnown RBP13.01□□□□□ -0.33
DDX11-229ENST00000545668 E9PCH4 1651 aa13.01□□□□□ -0.33
DDX11-229ENST00000545668 IL27Q8NEV9 243 aa13.01□□□□□ -0.33
DDX11-229ENST00000545668 TMF1P82094 1093 aa13□□□□□ -0.33
DDX11-229ENST00000545668 CYB5RLQ6IPT4 315 aa13□□□□□ -0.33
DDX11-229ENST00000545668 PTPRTO14522 1441 aa12.99□□□□□ -0.33
DDX11-229ENST00000545668 STAC3Q96MF2 364 aa12.99□□□□□ -0.33
DDX11-229ENST00000545668 TRPM2O94759 1503 aa12.99□□□□□ -0.33
DDX11-229ENST00000545668 EIF2AK4Q9P2K8 1649 aaKnown RBP12.99□□□□□ -0.33
DDX11-229ENST00000545668 CHGAP10645 457 aaKnown RBP12.98□□□□□ -0.33
DDX11-229ENST00000545668 TESK2Q96S53 571 aa12.98□□□□□ -0.33
DDX11-229ENST00000545668 RAPGEF3O95398 923 aa12.98□□□□□ -0.33
DDX11-229ENST00000545668 RALBP1Q15311 655 aa12.98□□□□□ -0.33
DDX11-229ENST00000545668 DEPDC5O75140 1603 aa12.97□□□□□ -0.33
DDX11-229ENST00000545668 ZBED9Q6R2W3 1325 aa12.97□□□□□ -0.33
DDX11-229ENST00000545668 TET3O43151 1660 aa12.97□□□□□ -0.33
DDX11-229ENST00000545668 ARXQ96QS3 562 aa12.97□□□□□ -0.33
DDX11-229ENST00000545668 POGZQ7Z3K3 1410 aa12.97□□□□□ -0.33
DDX11-229ENST00000545668 DISP3Q9P2K9 1392 aa12.97□□□□□ -0.33
DDX11-229ENST00000545668 MYBBP1AQ9BQG0 1328 aaKnown RBP12.95□□□□□ -0.34
DDX11-229ENST00000545668 PRDM15P57071 1507 aaPredicted RBP12.95□□□□□ -0.34
DDX11-229ENST00000545668 WASHC2CQ9Y4E1 1318 aa12.95□□□□□ -0.34
DDX11-229ENST00000545668 SPHKAPQ2M3C7 1700 aa12.95□□□□□ -0.34
DDX11-229ENST00000545668 KIDINS220Q9ULH0 1771 aa12.95□□□□□ -0.34
DDX11-229ENST00000545668 LAS1LQ9Y4W2 734 aaKnown RBP12.95□□□□□ -0.34
DDX11-229ENST00000545668 KTN1Q86UP2 1357 aaKnown RBP12.95□□□□□ -0.34
DDX11-229ENST00000545668 PANK3Q9H999 370 aa12.95□□□□□ -0.34
DDX11-229ENST00000545668 ZBTB47Q9UFB7 747 aaPredicted RBP12.95□□□□□ -0.34
DDX11-229ENST00000545668 CLTCL1P53675 1640 aa12.94□□□□□ -0.34
DDX11-229ENST00000545668 VWDEQ8N2E2 1590 aa12.94□□□□□ -0.34
DDX11-229ENST00000545668 CC2D1BQ5T0F9 858 aaKnown RBP12.94□□□□□ -0.34
DDX11-229ENST00000545668 PNISRQ8TF01 805 aaKnown RBP12.94□□□□□ -0.34
DDX11-229ENST00000545668 CFAP74Q9C0B2 1584 aa12.94□□□□□ -0.34
DDX11-229ENST00000545668 COL17A1Q9UMD9 1497 aaPredicted RBP12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms