RNA–Protein interactions for RNA: ENST00000545266.1

COPA-206, Transcript of coatomer protein complex subunit alpha, humanhuman

TSL 2

Gene COPA, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-206ENST00000545266 CDHR5Q9HBB8 845 aa12.64□□□□□ -0.39
COPA-206ENST00000545266 BCL2L12Q9HB09 334 aa12.63□□□□□ -0.39
COPA-206ENST00000545266 SLC24A3Q9HC58 644 aa12.62□□□□□ -0.39
COPA-206ENST00000545266 CERKQ8TCT0 537 aa12.61□□□□□ -0.39
COPA-206ENST00000545266 MINK1Q8N4C8 1332 aaPredicted RBP12.61□□□□□ -0.39
COPA-206ENST00000545266 MAP2K5Q13163 448 aa12.59□□□□□ -0.39
COPA-206ENST00000545266 FECHP22830 423 aa12.58□□□□□ -0.4
COPA-206ENST00000545266 AK7Q96M32 723 aa12.58□□□□□ -0.4
COPA-206ENST00000545266 LCE2DQ5TA82 110 aaPredicted RBP12.57□□□□□ -0.4
COPA-206ENST00000545266 TTC13Q8NBP0 860 aa12.57□□□□□ -0.4
COPA-206ENST00000545266 RBM27Q9P2N5 1060 aaKnown RBP12.57□□□□□ -0.4
COPA-206ENST00000545266 IRF6O14896 467 aa12.56□□□□□ -0.4
COPA-206ENST00000545266 KRI1Q8N9T8 703 aaKnown RBP12.54□□□□□ -0.4
COPA-206ENST00000545266 COL9A1P20849 921 aa12.52□□□□□ -0.41
COPA-206ENST00000545266 PTPREP23469 700 aa12.52□□□□□ -0.41
COPA-206ENST00000545266 FAM163AQ96GL9 167 aaPredicted RBP12.52□□□□□ -0.41
COPA-206ENST00000545266 ERBB3P21860 1342 aa12.52□□□□□ -0.41
COPA-206ENST00000545266 PPP1R3GB7ZBB8 358 aa12.51□□□□□ -0.41
COPA-206ENST00000545266 EMP3P54852 163 aa12.51□□□□□ -0.41
COPA-206ENST00000545266 TRIM66O15016 1216 aa12.5□□□□□ -0.41
COPA-206ENST00000545266 PRSS12P56730 875 aa12.5□□□□□ -0.41
COPA-206ENST00000545266 VARS2Q5ST30 1063 aaKnown RBP12.5□□□□□ -0.41
COPA-206ENST00000545266 CCDC102AQ96A19 550 aa12.49□□□□□ -0.41
COPA-206ENST00000545266 MARVELD3Q96A59 401 aa12.49□□□□□ -0.41
COPA-206ENST00000545266 BRPF1P55201 1214 aaPredicted RBP12.48□□□□□ -0.41
COPA-206ENST00000545266 POTEEQ6S8J3 1075 aa12.47□□□□□ -0.41
COPA-206ENST00000545266 ZNF687Q8N1G0 1237 aa12.47□□□□□ -0.41
COPA-206ENST00000545266 CDCA7LQ96GN5 454 aa12.47□□□□□ -0.41
COPA-206ENST00000545266 PBX2P40425 430 aa12.46□□□□□ -0.41
COPA-206ENST00000545266 PADI6Q6TGC4 694 aa12.46□□□□□ -0.41
COPA-206ENST00000545266 POTEB3A0JP26 581 aa12.45□□□□□ -0.42
COPA-206ENST00000545266 ONECUT3O60422 494 aaPredicted RBP12.45□□□□□ -0.42
COPA-206ENST00000545266 AMHR2Q16671 573 aa12.45□□□□□ -0.42
COPA-206ENST00000545266 POTEBQ6S5H4 581 aa12.45□□□□□ -0.42
COPA-206ENST00000545266 SLC4A5Q9BY07 1137 aa12.45□□□□□ -0.42
COPA-206ENST00000545266 ARHGAP33O14559 1287 aa12.44□□□□□ -0.42
COPA-206ENST00000545266 ADGRG1Q9Y653 693 aa12.44□□□□□ -0.42
COPA-206ENST00000545266 FAM205CA6NFA0 338 aa12.43□□□□□ -0.42
COPA-206ENST00000545266 KCNK17Q96T54 332 aa12.43□□□□□ -0.42
COPA-206ENST00000545266 FAM198AQ9UFP1 575 aa12.43□□□□□ -0.42
COPA-206ENST00000545266 PDE4DQ08499 809 aa12.42□□□□□ -0.42
COPA-206ENST00000545266 HS3ST6Q96QI5 342 aa12.42□□□□□ -0.42
COPA-206ENST00000545266 OATP04181 439 aa12.41□□□□□ -0.42
COPA-206ENST00000545266 ZBED2Q9BTP6 218 aa12.41□□□□□ -0.42
COPA-206ENST00000545266 TSKSQ9UJT2 592 aa12.41□□□□□ -0.42
COPA-206ENST00000545266 TRIM6-TRIM34B2RNG4 842 aa12.4□□□□□ -0.42
COPA-206ENST00000545266 KCNH8Q96L42 1107 aa12.4□□□□□ -0.42
COPA-206ENST00000545266 PSEN2P49810 448 aa12.39□□□□□ -0.43
COPA-206ENST00000545266 METTL3Q86U44 580 aaKnown RBP12.39□□□□□ -0.43
COPA-206ENST00000545266 PXYLP1Q8TE99 480 aa12.39□□□□□ -0.43
COPA-206ENST00000545266 PHOX2BQ99453 314 aa12.38□□□□□ -0.43
COPA-206ENST00000545266 TMUB1Q9BVT8 246 aa12.38□□□□□ -0.43
COPA-206ENST00000545266 EYA1Q99502 592 aa12.37□□□□□ -0.43
COPA-206ENST00000545266 NEUROD2Q15784 382 aa12.36□□□□□ -0.43
COPA-206ENST00000545266 FAM161AQ3B820 660 aa12.35□□□□□ -0.43
COPA-206ENST00000545266 PROX2Q3B8N5 592 aa12.35□□□□□ -0.43
COPA-206ENST00000545266 DMRTA1Q5VZB9 504 aa12.35□□□□□ -0.43
COPA-206ENST00000545266 C3orf80F5H4A9 247 aa12.34□□□□□ -0.43
COPA-206ENST00000545266 PACS2Q86VP3 889 aa12.34□□□□□ -0.43
COPA-206ENST00000545266 PARP9Q8IXQ6 854 aa12.34□□□□□ -0.43
COPA-206ENST00000545266 AXIN2Q9Y2T1 843 aa12.34□□□□□ -0.43
COPA-206ENST00000545266 RBM46Q8TBY0 533 aaKnown RBP12.33□□□□□ -0.44
COPA-206ENST00000545266 KDM4CQ9H3R0 1056 aa12.32□□□□□ -0.44
COPA-206ENST00000545266 GPBP1L1Q9HC44 474 aaPredicted RBP12.32□□□□□ -0.44
COPA-206ENST00000545266 RABGEF1Q9UJ41 708 aa12.32□□□□□ -0.44
COPA-206ENST00000545266 NBPF26B4DH59 902 aa12.31□□□□□ -0.44
COPA-206ENST00000545266 TK2O00142 265 aa12.31□□□□□ -0.44
COPA-206ENST00000545266 TATDN2Q93075 761 aa12.31□□□□□ -0.44
COPA-206ENST00000545266 VPS9D1Q9Y2B5 631 aa12.31□□□□□ -0.44
COPA-206ENST00000545266 KIAA1468Q9P260 1216 aa12.3□□□□□ -0.44
COPA-206ENST00000545266 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.29□□□□□ -0.44
COPA-206ENST00000545266 CLCN1P35523 988 aa12.29□□□□□ -0.44
COPA-206ENST00000545266 NUDT18Q6ZVK8 323 aa12.29□□□□□ -0.44
COPA-206ENST00000545266 REPIN1Q9BWE0 567 aaKnown RBP12.29□□□□□ -0.44
COPA-206ENST00000545266 TMEM132AQ24JP5 1023 aa12.28□□□□□ -0.44
COPA-206ENST00000545266 BHMG1C9JSJ3 638 aaPredicted RBP12.27□□□□□ -0.45
COPA-206ENST00000545266 GPCPD1Q9NPB8 672 aa12.27□□□□□ -0.45
COPA-206ENST00000545266 RCCD1A6NED2 376 aa12.26□□□□□ -0.45
COPA-206ENST00000545266 LSM11P83369 360 aaKnown RBP eCLIP12.26□□□□□ -0.45
COPA-206ENST00000545266 PNMA3Q9UL41 463 aa12.26□□□□□ -0.45
COPA-206ENST00000545266 GIGYF2Q6Y7W6 1299 aaKnown RBP12.25□□□□□ -0.45
COPA-206ENST00000545266 MDM2Q00987 491 aaPredicted RBP12.24□□□□□ -0.45
COPA-206ENST00000545266 TTLL12Q14166 644 aaPredicted RBP12.24□□□□□ -0.45
COPA-206ENST00000545266 DNAJB2P25686 324 aa12.23□□□□□ -0.45
COPA-206ENST00000545266 TMEM134Q9H6X4 195 aa12.23□□□□□ -0.45
COPA-206ENST00000545266 DAXXQ9UER7 740 aaPredicted RBP12.23□□□□□ -0.45
COPA-206ENST00000545266 LAPTM4BQ86VI4 370 aa12.22□□□□□ -0.45
COPA-206ENST00000545266 FAM217BQ9NTX9 383 aaPredicted RBP12.22□□□□□ -0.45
COPA-206ENST00000545266 HRO43593 1189 aa12.21□□□□□ -0.45
COPA-206ENST00000545266 NLRP7Q8WX94 980 aa12.21□□□□□ -0.45
COPA-206ENST00000545266 SMAPO00193 183 aa12.2□□□□□ -0.46
COPA-206ENST00000545266 MS4A1P11836 297 aa12.2□□□□□ -0.46
COPA-206ENST00000545266 ADGRD1Q6QNK2 874 aa12.2□□□□□ -0.46
COPA-206ENST00000545266 FAM117AQ9C073 453 aa12.2□□□□□ -0.46
COPA-206ENST00000545266 FAM98CQ17RN3 349 aaKnown RBP12.19□□□□□ -0.46
COPA-206ENST00000545266 KRTAP3-3Q9BYR6 98 aa12.19□□□□□ -0.46
COPA-206ENST00000545266 KRTAP3-2Q9BYR7 98 aa12.19□□□□□ -0.46
COPA-206ENST00000545266 PLEKHG3A1L390 1219 aa12.18□□□□□ -0.46
COPA-206ENST00000545266 SSTR3P32745 418 aaPredicted RBP12.18□□□□□ -0.46
COPA-206ENST00000545266 DDRGK1Q96HY6 314 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms