RNA–Protein interactions for RNA: ENST00000544891.6

NECAP1-207, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 4,899 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-207ENST00000544891 NAIPQ13075 1403 aa11.57□□□□□ -0.56
NECAP1-207ENST00000544891 ABCC2Q92887 1545 aa11.57□□□□□ -0.56
NECAP1-207ENST00000544891 ZBTB7CA1YPR0 619 aa11.57□□□□□ -0.56
NECAP1-207ENST00000544891 PREX2Q70Z35 1606 aa11.57□□□□□ -0.56
NECAP1-207ENST00000544891 NBR1Q14596 966 aa11.57□□□□□ -0.56
NECAP1-207ENST00000544891 DCAF11Q8TEB1 546 aa11.57□□□□□ -0.56
NECAP1-207ENST00000544891 PTPRGP23470 1445 aa11.57□□□□□ -0.56
NECAP1-207ENST00000544891 SUPT16HQ9Y5B9 1047 aaKnown RBP11.57□□□□□ -0.56
NECAP1-207ENST00000544891 PLB1Q6P1J6 1458 aa11.56□□□□□ -0.56
NECAP1-207ENST00000544891 SIN3AQ96ST3 1273 aa11.56□□□□□ -0.56
NECAP1-207ENST00000544891 A0A0G2JS52 829 aa11.55□□□□□ -0.56
NECAP1-207ENST00000544891 IRX6P78412 446 aaPredicted RBP11.55□□□□□ -0.56
NECAP1-207ENST00000544891 CDC42BPAQ5VT25 1732 aa11.55□□□□□ -0.56
NECAP1-207ENST00000544891 PLEKHH2Q8IVE3 1493 aa11.55□□□□□ -0.56
NECAP1-207ENST00000544891 RALBP1Q15311 655 aa11.55□□□□□ -0.56
NECAP1-207ENST00000544891 ABCC10Q5T3U5 1492 aa11.54□□□□□ -0.56
NECAP1-207ENST00000544891 IPO8O15397 1037 aaKnown RBP11.54□□□□□ -0.56
NECAP1-207ENST00000544891 HDGFL2Q7Z4V5 671 aaPredicted RBP11.54□□□□□ -0.56
NECAP1-207ENST00000544891 KTN1Q86UP2 1357 aaKnown RBP11.53□□□□□ -0.56
NECAP1-207ENST00000544891 MAST1Q9Y2H9 1570 aa11.53□□□□□ -0.56
NECAP1-207ENST00000544891 GPATCH8Q9UKJ3 1502 aaKnown RBP11.53□□□□□ -0.56
NECAP1-207ENST00000544891 EIF3AQ14152 1382 aaKnown RBP11.53□□□□□ -0.56
NECAP1-207ENST00000544891 NRDCO43847 1150 aa11.53□□□□□ -0.56
NECAP1-207ENST00000544891 MORC1Q86VD1 984 aa11.53□□□□□ -0.56
NECAP1-207ENST00000544891 HDAC5Q9UQL6 1122 aa11.53□□□□□ -0.56
NECAP1-207ENST00000544891 ATP10BO94823 1461 aa11.53□□□□□ -0.56
NECAP1-207ENST00000544891 PTPRKQ15262 1439 aa11.52□□□□□ -0.56
NECAP1-207ENST00000544891 ABCC5O15440 1437 aa11.52□□□□□ -0.57
NECAP1-207ENST00000544891 MYO5CQ9NQX4 1742 aa11.52□□□□□ -0.57
NECAP1-207ENST00000544891 U2SURPO15042 1029 aaKnown RBP11.52□□□□□ -0.57
NECAP1-207ENST00000544891 ROCK2O75116 1388 aaKnown RBP11.52□□□□□ -0.57
NECAP1-207ENST00000544891 PKD2Q13563 968 aa11.51□□□□□ -0.57
NECAP1-207ENST00000544891 MCCP23508 829 aa11.5□□□□□ -0.57
NECAP1-207ENST00000544891 SRPK2P78362 688 aaKnown RBP11.5□□□□□ -0.57
NECAP1-207ENST00000544891 NEUROD2Q15784 382 aa11.5□□□□□ -0.57
NECAP1-207ENST00000544891 GOLGA6L6A8MZA4 724 aa11.5□□□□□ -0.57
NECAP1-207ENST00000544891 PTMAP06454 111 aaKnown RBP11.49□□□□□ -0.57
NECAP1-207ENST00000544891 KDM5DQ9BY66 1539 aa11.49□□□□□ -0.57
NECAP1-207ENST00000544891 LAS1LQ9Y4W2 734 aaKnown RBP11.49□□□□□ -0.57
NECAP1-207ENST00000544891 ZCCHC11Q5TAX3 1644 aaKnown RBP11.49□□□□□ -0.57
NECAP1-207ENST00000544891 FRAT1Q92837 279 aaPredicted RBP11.49□□□□□ -0.57
NECAP1-207ENST00000544891 PTMSP20962 102 aa11.49□□□□□ -0.57
NECAP1-207ENST00000544891 OS9Q13438 667 aaPredicted RBP11.49□□□□□ -0.57
NECAP1-207ENST00000544891 ARAP3Q8WWN8 1544 aa11.49□□□□□ -0.57
NECAP1-207ENST00000544891 CC2D1BQ5T0F9 858 aaKnown RBP11.48□□□□□ -0.57
NECAP1-207ENST00000544891 RTF1Q92541 710 aaKnown RBP11.47□□□□□ -0.57
NECAP1-207ENST00000544891 NUP155O75694 1391 aa11.47□□□□□ -0.57
NECAP1-207ENST00000544891 PDE3BQ13370 1112 aa11.47□□□□□ -0.57
NECAP1-207ENST00000544891 MPHOSPH9Q99550 1183 aa11.47□□□□□ -0.57
NECAP1-207ENST00000544891 HSPA5P11021 654 aaKnown RBP11.47□□□□□ -0.57
NECAP1-207ENST00000544891 FGD1P98174 961 aa11.46□□□□□ -0.57
NECAP1-207ENST00000544891 LMOD2Q6P5Q4 547 aa11.46□□□□□ -0.57
NECAP1-207ENST00000544891 PLXNC1O60486 1568 aa11.46□□□□□ -0.57
NECAP1-207ENST00000544891 HSP90AB1P08238 724 aaKnown RBP11.46□□□□□ -0.58
NECAP1-207ENST00000544891 TNNT2P45379 298 aaPredicted RBP11.46□□□□□ -0.58
NECAP1-207ENST00000544891 KCNJ4P48050 445 aa11.46□□□□□ -0.58
NECAP1-207ENST00000544891 HSCBQ8IWL3 235 aa11.45□□□□□ -0.58
NECAP1-207ENST00000544891 CCDC141Q6ZP82 1450 aa11.45□□□□□ -0.58
NECAP1-207ENST00000544891 CDC42BPBQ9Y5S2 1711 aa11.45□□□□□ -0.58
NECAP1-207ENST00000544891 CFAP74Q9C0B2 1584 aa11.44□□□□□ -0.58
NECAP1-207ENST00000544891 RGS3P49796 1198 aa11.44□□□□□ -0.58
NECAP1-207ENST00000544891 TERF2IPQ9NYB0 399 aa11.44□□□□□ -0.58
NECAP1-207ENST00000544891 NOP58Q9Y2X3 529 aaKnown RBP11.44□□□□□ -0.58
NECAP1-207ENST00000544891 SAMD9LQ8IVG5 1584 aa11.44□□□□□ -0.58
NECAP1-207ENST00000544891 KIAA1107Q9UPP5 1409 aa11.44□□□□□ -0.58
NECAP1-207ENST00000544891 KDM5BQ9UGL1 1544 aa11.43□□□□□ -0.58
NECAP1-207ENST00000544891 ARHGAP5Q13017 1502 aa11.43□□□□□ -0.58
NECAP1-207ENST00000544891 GGT6Q6P531 493 aa11.43□□□□□ -0.58
NECAP1-207ENST00000544891 GOLGA2Q08379 1002 aa11.42□□□□□ -0.58
NECAP1-207ENST00000544891 LMOD3Q0VAK6 560 aa11.42□□□□□ -0.58
NECAP1-207ENST00000544891 RWDD1Q9H446 243 aaPredicted RBP11.42□□□□□ -0.58
NECAP1-207ENST00000544891 C9orf84Q5VXU9 1444 aa11.42□□□□□ -0.58
NECAP1-207ENST00000544891 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.42□□□□□ -0.58
NECAP1-207ENST00000544891 L1TD1Q5T7N2 865 aaKnown RBP11.42□□□□□ -0.58
NECAP1-207ENST00000544891 KDM6BO15054 1643 aa11.41□□□□□ -0.58
NECAP1-207ENST00000544891 GOLGA6L4A6NEF3 574 aa11.41□□□□□ -0.58
NECAP1-207ENST00000544891 NPHP1O15259 732 aa11.41□□□□□ -0.58
NECAP1-207ENST00000544891 STAC3Q96MF2 364 aa11.41□□□□□ -0.58
NECAP1-207ENST00000544891 TTC37Q6PGP7 1564 aa11.41□□□□□ -0.58
NECAP1-207ENST00000544891 TCERG1O14776 1098 aaKnown RBP11.41□□□□□ -0.58
NECAP1-207ENST00000544891 NLRP13Q86W25 1043 aa11.41□□□□□ -0.58
NECAP1-207ENST00000544891 SPAG9O60271 1321 aaKnown RBP11.41□□□□□ -0.58
NECAP1-207ENST00000544891 NCOA1Q15788 1441 aa11.41□□□□□ -0.58
NECAP1-207ENST00000544891 UNC13BO14795 1591 aa11.41□□□□□ -0.58
NECAP1-207ENST00000544891 NGEFQ8N5V2 710 aa11.4□□□□□ -0.58
NECAP1-207ENST00000544891 RTN4Q9NQC3 1192 aaKnown RBP11.4□□□□□ -0.58
NECAP1-207ENST00000544891 PMFBP1Q8TBY8 1022 aa11.39□□□□□ -0.59
NECAP1-207ENST00000544891 DNTTIP2Q5QJE6 756 aaKnown RBP11.39□□□□□ -0.59
NECAP1-207ENST00000544891 HTATSF1O43719 755 aaKnown RBP11.38□□□□□ -0.59
NECAP1-207ENST00000544891 PLEKHG5O94827 1062 aa11.38□□□□□ -0.59
NECAP1-207ENST00000544891 DUOX2Q9NRD8 1548 aa11.38□□□□□ -0.59
NECAP1-207ENST00000544891 RCAN3Q9UKA8 241 aa11.38□□□□□ -0.59
NECAP1-207ENST00000544891 KIAA1211Q6ZU35 1233 aa11.38□□□□□ -0.59
NECAP1-207ENST00000544891 EID1Q9Y6B2 187 aa11.38□□□□□ -0.59
NECAP1-207ENST00000544891 HMMRO75330 724 aa11.37□□□□□ -0.59
NECAP1-207ENST00000544891 ERBINQ96RT1 1412 aa11.37□□□□□ -0.59
NECAP1-207ENST00000544891 U2AF1L5P0DN76 240 aaPredicted RBP11.37□□□□□ -0.59
NECAP1-207ENST00000544891 U2AF1Q01081 240 aaKnown RBP eCLIP11.37□□□□□ -0.59
NECAP1-207ENST00000544891 RPRD2Q5VT52 1461 aaKnown RBP11.37□□□□□ -0.59
NECAP1-207ENST00000544891 SENP3Q9H4L4 574 aaPredicted RBP11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms