RNA–Protein interactions for RNA: ENST00000544810.5

CNGA1-209, Transcript of cyclic nucleotide gated channel alpha 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CNGA1, Length 2,722 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1-209ENST00000544810 REREQ9P2R6 1566 aa7.01□□□□□ -1.29
CNGA1-209ENST00000544810 SETD1BQ9UPS6 1966 aaKnown RBP7.01□□□□□ -1.29
CNGA1-209ENST00000544810 PLCH2O75038 1416 aa7.01□□□□□ -1.29
CNGA1-209ENST00000544810 PIP4K2BP78356 416 aa7.01□□□□□ -1.29
CNGA1-209ENST00000544810 POLA2Q14181 598 aa7.01□□□□□ -1.29
CNGA1-209ENST00000544810 NPATQ14207 1427 aa7□□□□□ -1.29
CNGA1-209ENST00000544810 PLA2R1Q13018 1463 aa7□□□□□ -1.29
CNGA1-209ENST00000544810 DIP2CQ9Y2E4 1556 aa7□□□□□ -1.29
CNGA1-209ENST00000544810 AGLP35573 1532 aa7□□□□□ -1.29
CNGA1-209ENST00000544810 CNTLNQ9NXG0 1405 aa7□□□□□ -1.29
CNGA1-209ENST00000544810 TCOF1Q13428 1488 aaKnown RBP6.99□□□□□ -1.29
CNGA1-209ENST00000544810 ZNF518AQ6AHZ1 1483 aa6.99□□□□□ -1.29
CNGA1-209ENST00000544810 KDM5CP41229 1560 aa6.99□□□□□ -1.29
CNGA1-209ENST00000544810 TOM1O60784 492 aa6.99□□□□□ -1.29
CNGA1-209ENST00000544810 CENPBP07199 599 aaPredicted RBP6.99□□□□□ -1.29
CNGA1-209ENST00000544810 ESF1Q9H501 851 aaKnown RBP6.98□□□□□ -1.29
CNGA1-209ENST00000544810 SPINK5Q9NQ38 1064 aaPredicted RBP6.98□□□□□ -1.29
CNGA1-209ENST00000544810 EFCAB2Q5VUJ9 269 aa6.97□□□□□ -1.29
CNGA1-209ENST00000544810 DAXXQ9UER7 740 aaPredicted RBP6.97□□□□□ -1.29
CNGA1-209ENST00000544810 CPS1P31327 1500 aa6.97□□□□□ -1.29
CNGA1-209ENST00000544810 ABCA6Q8N139 1617 aa6.97□□□□□ -1.29
CNGA1-209ENST00000544810 RGS17Q9UGC6 210 aaPredicted RBP6.97□□□□□ -1.29
CNGA1-209ENST00000544810 ALKQ9UM73 1620 aa6.96□□□□□ -1.3
CNGA1-209ENST00000544810 PLCD3Q8N3E9 789 aa6.96□□□□□ -1.3
CNGA1-209ENST00000544810 AFAP1Q8N556 730 aa6.96□□□□□ -1.3
CNGA1-209ENST00000544810 MLH3Q9UHC1 1453 aa6.96□□□□□ -1.3
CNGA1-209ENST00000544810 ZNF142P52746 1687 aaPredicted RBP6.96□□□□□ -1.3
CNGA1-209ENST00000544810 NEUROD1Q13562 356 aa6.95□□□□□ -1.3
CNGA1-209ENST00000544810 CIZ1Q9ULV3 898 aaPredicted RBP6.95□□□□□ -1.3
CNGA1-209ENST00000544810 PTPRKQ15262 1439 aa6.95□□□□□ -1.3
CNGA1-209ENST00000544810 MYO3AQ8NEV4 1616 aa6.95□□□□□ -1.3
CNGA1-209ENST00000544810 CEP170BQ9Y4F5 1589 aaPredicted RBP6.94□□□□□ -1.3
CNGA1-209ENST00000544810 MROH2AA6NES4 1674 aa6.94□□□□□ -1.3
CNGA1-209ENST00000544810 SHANK2Q9UPX8 1470 aa6.94□□□□□ -1.3
CNGA1-209ENST00000544810 CDK13Q14004 1512 aaKnown RBP6.94□□□□□ -1.3
CNGA1-209ENST00000544810 MYT1LQ9UL68 1186 aa6.94□□□□□ -1.3
CNGA1-209ENST00000544810 ZMYM3Q14202 1370 aa6.94□□□□□ -1.3
CNGA1-209ENST00000544810 POTEHQ6S545 545 aa6.93□□□□□ -1.3
CNGA1-209ENST00000544810 ARXQ96QS3 562 aa6.92□□□□□ -1.3
CNGA1-209ENST00000544810 MYO5CQ9NQX4 1742 aa6.92□□□□□ -1.3
CNGA1-209ENST00000544810 ARHGAP5Q13017 1502 aa6.92□□□□□ -1.3
CNGA1-209ENST00000544810 POTEAQ6S8J7 498 aa6.91□□□□□ -1.3
CNGA1-209ENST00000544810 NEURL4Q96JN8 1562 aa6.91□□□□□ -1.3
CNGA1-209ENST00000544810 VWDEQ8N2E2 1590 aa6.9□□□□□ -1.3
CNGA1-209ENST00000544810 A2ML1A8K2U0 1454 aa6.9□□□□□ -1.3
CNGA1-209ENST00000544810 MIER1Q8N108 512 aa6.9□□□□□ -1.31
CNGA1-209ENST00000544810 ABCC1P33527 1531 aa6.89□□□□□ -1.31
CNGA1-209ENST00000544810 TMEM132AQ24JP5 1023 aa6.89□□□□□ -1.31
CNGA1-209ENST00000544810 KIF14Q15058 1648 aa6.89□□□□□ -1.31
CNGA1-209ENST00000544810 KIDINS220Q9ULH0 1771 aa6.88□□□□□ -1.31
CNGA1-209ENST00000544810 DNMT1P26358 1616 aaKnown RBP6.88□□□□□ -1.31
CNGA1-209ENST00000544810 SUPT6HQ7KZ85 1726 aaKnown RBP6.88□□□□□ -1.31
CNGA1-209ENST00000544810 RANGAP1P46060 587 aaPredicted RBP6.88□□□□□ -1.31
CNGA1-209ENST00000544810 ABCB7O75027 752 aa6.87□□□□□ -1.31
CNGA1-209ENST00000544810 RNF17Q9BXT8 1623 aaKnown RBP6.87□□□□□ -1.31
CNGA1-209ENST00000544810 CLTCQ00610 1675 aaKnown RBP6.87□□□□□ -1.31
CNGA1-209ENST00000544810 TROQ12816 1431 aaPredicted RBP6.87□□□□□ -1.31
CNGA1-209ENST00000544810 CAPN15O75808 1086 aa6.87□□□□□ -1.31
CNGA1-209ENST00000544810 C14orf37Q86TY3 774 aa6.87□□□□□ -1.31
CNGA1-209ENST00000544810 POLR1AO95602 1720 aaPredicted RBP6.86□□□□□ -1.31
CNGA1-209ENST00000544810 ITSN2Q9NZM3 1697 aa6.86□□□□□ -1.31
CNGA1-209ENST00000544810 LRRC7Q96NW7 1537 aa6.86□□□□□ -1.31
CNGA1-209ENST00000544810 SETD1AO15047 1707 aaKnown RBP6.86□□□□□ -1.31
CNGA1-209ENST00000544810 NPHP4O75161 1426 aaPredicted RBP6.85□□□□□ -1.31
CNGA1-209ENST00000544810 CDK11AQ9UQ88 783 aaPredicted RBP6.85□□□□□ -1.31
CNGA1-209ENST00000544810 CLIP1P30622 1438 aa6.85□□□□□ -1.31
CNGA1-209ENST00000544810 SYNMO15061 1565 aa6.85□□□□□ -1.31
CNGA1-209ENST00000544810 PLXNC1O60486 1568 aa6.85□□□□□ -1.31
CNGA1-209ENST00000544810 SAMD9LQ8IVG5 1584 aa6.85□□□□□ -1.31
CNGA1-209ENST00000544810 CLSPNQ9HAW4 1339 aa6.85□□□□□ -1.31
CNGA1-209ENST00000544810 MED14O60244 1454 aa6.85□□□□□ -1.31
CNGA1-209ENST00000544810 NKX1-1Q15270 411 aaPredicted RBP6.84□□□□□ -1.31
CNGA1-209ENST00000544810 RNF25Q96BH1 459 aaPredicted RBP6.84□□□□□ -1.31
CNGA1-209ENST00000544810 BCL11AQ9H165 835 aa6.84□□□□□ -1.31
CNGA1-209ENST00000544810 PREX2Q70Z35 1606 aa6.84□□□□□ -1.31
CNGA1-209ENST00000544810 ANKLE2Q86XL3 938 aa6.84□□□□□ -1.32
CNGA1-209ENST00000544810 UPF1Q92900 1129 aaKnown RBP eCLIP6.84□□□□□ -1.32
CNGA1-209ENST00000544810 CDC42BPBQ9Y5S2 1711 aa6.83□□□□□ -1.32
CNGA1-209ENST00000544810 TNRQ92752 1358 aa6.83□□□□□ -1.32
CNGA1-209ENST00000544810 A2MP01023 1474 aa6.83□□□□□ -1.32
CNGA1-209ENST00000544810 DEPDC5O75140 1603 aa6.83□□□□□ -1.32
CNGA1-209ENST00000544810 ZNF692Q9BU19 519 aaPredicted RBP6.83□□□□□ -1.32
CNGA1-209ENST00000544810 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP6.82□□□□□ -1.32
CNGA1-209ENST00000544810 SPAG9O60271 1321 aaKnown RBP6.82□□□□□ -1.32
CNGA1-209ENST00000544810 GGT6Q6P531 493 aa6.82□□□□□ -1.32
CNGA1-209ENST00000544810 ATP7AQ04656 1500 aa6.81□□□□□ -1.32
CNGA1-209ENST00000544810 LOC105371045A0A1W2PR82 267 aa6.81□□□□□ -1.32
CNGA1-209ENST00000544810 HOMEZQ8IX15 550 aa6.81□□□□□ -1.32
CNGA1-209ENST00000544810 HS6ST3Q8IZP7 471 aa6.81□□□□□ -1.32
CNGA1-209ENST00000544810 ATP1B4Q9UN42 357 aaPredicted RBP6.81□□□□□ -1.32
CNGA1-209ENST00000544810 FAM135BQ49AJ0 1406 aa6.81□□□□□ -1.32
CNGA1-209ENST00000544810 FMN1Q68DA7 1419 aa6.81□□□□□ -1.32
CNGA1-209ENST00000544810 STRCP1A6NGW2 1772 aa6.81□□□□□ -1.32
CNGA1-209ENST00000544810 DSG3P32926 999 aa6.81□□□□□ -1.32
CNGA1-209ENST00000544810 DIEXFQ68CQ4 756 aaKnown RBP6.81□□□□□ -1.32
CNGA1-209ENST00000544810 INO80Q9ULG1 1556 aaPredicted RBP6.81□□□□□ -1.32
CNGA1-209ENST00000544810 IQGAP1P46940 1657 aa6.8□□□□□ -1.32
CNGA1-209ENST00000544810 SYCP2Q9BX26 1530 aa6.8□□□□□ -1.32
CNGA1-209ENST00000544810 THEMISQ8N1K5 641 aaPredicted RBP6.8□□□□□ -1.32
CNGA1-209ENST00000544810 PZPP20742 1482 aa6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms