RNA–Protein interactions for RNA: ENST00000544585.5

CPSF7-222, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 2

Gene CPSF7, Length 722 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-222ENST00000544585 KDM6BO15054 1643 aa10.48□□□□□ -0.73
CPSF7-222ENST00000544585 PIP4P2Q8N4L2 257 aa10.48□□□□□ -0.73
CPSF7-222ENST00000544585 GPBP1L1Q9HC44 474 aaPredicted RBP10.47□□□□□ -0.73
CPSF7-222ENST00000544585 GPHNQ9NQX3 736 aaPredicted RBP10.46□□□□□ -0.73
CPSF7-222ENST00000544585 TTBK1Q5TCY1 1321 aaPredicted RBP10.46□□□□□ -0.73
CPSF7-222ENST00000544585 ADCY10Q96PN6 1610 aa10.45□□□□□ -0.74
CPSF7-222ENST00000544585 CARMIL2Q6F5E8 1435 aa10.45□□□□□ -0.74
CPSF7-222ENST00000544585 TNIKQ9UKE5 1360 aa10.45□□□□□ -0.74
CPSF7-222ENST00000544585 CHRDL2Q6WN34 429 aa10.45□□□□□ -0.74
CPSF7-222ENST00000544585 IL27Q8NEV9 243 aa10.45□□□□□ -0.74
CPSF7-222ENST00000544585 PLB1Q6P1J6 1458 aa10.44□□□□□ -0.74
CPSF7-222ENST00000544585 KIF27Q86VH2 1401 aa10.43□□□□□ -0.74
CPSF7-222ENST00000544585 SPDYE16A6NNV3 312 aaPredicted RBP10.43□□□□□ -0.74
CPSF7-222ENST00000544585 KDM4CQ9H3R0 1056 aa10.43□□□□□ -0.74
CPSF7-222ENST00000544585 DPYSL4O14531 572 aa10.42□□□□□ -0.74
CPSF7-222ENST00000544585 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.42□□□□□ -0.744e-9■■■□□ 15.2
CPSF7-222ENST00000544585 RUSC2Q8N2Y8 1516 aa10.42□□□□□ -0.74
CPSF7-222ENST00000544585 ASXL2Q76L83 1435 aa10.41□□□□□ -0.74
CPSF7-222ENST00000544585 CARMIL1Q5VZK9 1371 aa10.41□□□□□ -0.74
CPSF7-222ENST00000544585 TSPOAP1O95153 1857 aa10.41□□□□□ -0.74
CPSF7-222ENST00000544585 TRIM66O15016 1216 aa10.41□□□□□ -0.74
CPSF7-222ENST00000544585 ABCC2Q92887 1545 aa10.4□□□□□ -0.74
CPSF7-222ENST00000544585 PDE4DQ08499 809 aa10.4□□□□□ -0.74
CPSF7-222ENST00000544585 MS4A3Q96HJ5 214 aa10.4□□□□□ -0.74
CPSF7-222ENST00000544585 TRPC6Q9Y210 931 aa10.4□□□□□ -0.74
CPSF7-222ENST00000544585 PDIA6Q15084 440 aa10.39□□□□□ -0.75
CPSF7-222ENST00000544585 GLI2P10070 1586 aa10.39□□□□□ -0.75
CPSF7-222ENST00000544585 UHRF1BP1LA0JNW5 1464 aa10.38□□□□□ -0.75
CPSF7-222ENST00000544585 EMILIN3Q9NT22 766 aa10.38□□□□□ -0.75
CPSF7-222ENST00000544585 UACAQ9BZF9 1416 aa10.38□□□□□ -0.75
CPSF7-222ENST00000544585 ADGRL1O94910 1474 aa10.37□□□□□ -0.75
CPSF7-222ENST00000544585 TIE1P35590 1138 aa10.36□□□□□ -0.75
CPSF7-222ENST00000544585 DSG2Q14126 1118 aa10.36□□□□□ -0.75
CPSF7-222ENST00000544585 TMC2Q8TDI7 906 aa10.36□□□□□ -0.75
CPSF7-222ENST00000544585 FBXO41Q8TF61 875 aa10.36□□□□□ -0.75
CPSF7-222ENST00000544585 TEX14Q8IWB6 1497 aa10.36□□□□□ -0.75
CPSF7-222ENST00000544585 COL17A1Q9UMD9 1497 aaPredicted RBP10.36□□□□□ -0.75
CPSF7-222ENST00000544585 ZMYND15Q9H091 742 aa10.35□□□□□ -0.75
CPSF7-222ENST00000544585 TTLL13PA6NNM8 815 aa10.34□□□□□ -0.75
CPSF7-222ENST00000544585 FAM9AQ8IZU1 332 aaPredicted RBP10.33□□□□□ -0.76
CPSF7-222ENST00000544585 EPRSP07814 1512 aaKnown RBP10.33□□□□□ -0.76
CPSF7-222ENST00000544585 CUL7Q14999 1698 aa10.32□□□□□ -0.76
CPSF7-222ENST00000544585 FOXK1P85037 733 aa10.32□□□□□ -0.76
CPSF7-222ENST00000544585 KCNH8Q96L42 1107 aa10.32□□□□□ -0.76
CPSF7-222ENST00000544585 KDM5BQ9UGL1 1544 aa10.32□□□□□ -0.76
CPSF7-222ENST00000544585 MINK1Q8N4C8 1332 aaPredicted RBP10.31□□□□□ -0.76
CPSF7-222ENST00000544585 ILDR2Q71H61 639 aa10.3□□□□□ -0.76
CPSF7-222ENST00000544585 MICALL2Q8IY33 904 aa10.3□□□□□ -0.76
CPSF7-222ENST00000544585 RSPH6AQ9H0K4 717 aa10.3□□□□□ -0.76
CPSF7-222ENST00000544585 NUTM2FA1L443 756 aa10.29□□□□□ -0.76
CPSF7-222ENST00000544585 GRXCR2A6NFK2 248 aa10.29□□□□□ -0.76
CPSF7-222ENST00000544585 PPRC1Q5VV67 1664 aaKnown RBP10.28□□□□□ -0.76
CPSF7-222ENST00000544585 HECW2Q9P2P5 1572 aa10.28□□□□□ -0.76
CPSF7-222ENST00000544585 CD109Q6YHK3 1445 aa10.28□□□□□ -0.76
CPSF7-222ENST00000544585 GPR37O15354 613 aa10.28□□□□□ -0.76
CPSF7-222ENST00000544585 TRIM35Q9UPQ4 493 aa10.28□□□□□ -0.76
CPSF7-222ENST00000544585 DISP1Q96F81 1524 aa10.28□□□□□ -0.76
CPSF7-222ENST00000544585 IQGAP2Q13576 1575 aa10.27□□□□□ -0.76
CPSF7-222ENST00000544585 ZNF316A6NFI3 1004 aaPredicted RBP10.27□□□□□ -0.77
CPSF7-222ENST00000544585 MAP3K9P80192 1104 aa10.27□□□□□ -0.77
CPSF7-222ENST00000544585 DPY19L2Q6NUT2 758 aa10.27□□□□□ -0.77
CPSF7-222ENST00000544585 PLPP6Q8IY26 295 aa10.27□□□□□ -0.77
CPSF7-222ENST00000544585 DDRGK1Q96HY6 314 aa10.27□□□□□ -0.77
CPSF7-222ENST00000544585 FAM117AQ9C073 453 aa10.27□□□□□ -0.77
CPSF7-222ENST00000544585 BMP2KQ9NSY1 1161 aaPredicted RBP10.27□□□□□ -0.77
CPSF7-222ENST00000544585 MAP2K5Q13163 448 aa10.26□□□□□ -0.77
CPSF7-222ENST00000544585 MAP3K4Q9Y6R4 1608 aa10.25□□□□□ -0.77
CPSF7-222ENST00000544585 WDR7Q9Y4E6 1490 aa10.24□□□□□ -0.77
CPSF7-222ENST00000544585 RAPGEF2Q9Y4G8 1499 aa10.24□□□□□ -0.77
CPSF7-222ENST00000544585 MAGI3Q5TCQ9 1506 aa10.24□□□□□ -0.77
CPSF7-222ENST00000544585 G3V3G9 751 aa10.24□□□□□ -0.77
CPSF7-222ENST00000544585 CCDC102AQ96A19 550 aa10.24□□□□□ -0.77
CPSF7-222ENST00000544585 PHLDB1Q86UU1 1377 aa10.24□□□□□ -0.77
CPSF7-222ENST00000544585 UGGT2Q9NYU1 1516 aa10.23□□□□□ -0.77
CPSF7-222ENST00000544585 C19orf67A6NJJ6 358 aa10.23□□□□□ -0.77
CPSF7-222ENST00000544585 IRF6O14896 467 aa10.23□□□□□ -0.77
CPSF7-222ENST00000544585 C2orf72A6NCS6 295 aa10.21□□□□□ -0.77
CPSF7-222ENST00000544585 GNPATO15228 680 aa10.21□□□□□ -0.77
CPSF7-222ENST00000544585 AMHR2Q16671 573 aa10.21□□□□□ -0.77
CPSF7-222ENST00000544585 FCHSD2O94868 740 aa10.2□□□□□ -0.78
CPSF7-222ENST00000544585 HIC1Q14526 733 aa10.2□□□□□ -0.78
CPSF7-222ENST00000544585 PDCD7Q8N8D1 485 aaKnown RBP10.2□□□□□ -0.78
CPSF7-222ENST00000544585 BOLA1Q9Y3E2 137 aa10.2□□□□□ -0.78
CPSF7-222ENST00000544585 ZCCHC11Q5TAX3 1644 aaKnown RBP10.19□□□□□ -0.78
CPSF7-222ENST00000544585 GOLGA3Q08378 1498 aa10.19□□□□□ -0.78
CPSF7-222ENST00000544585 PLEKHG3A1L390 1219 aa10.19□□□□□ -0.78
CPSF7-222ENST00000544585 UBTFP17480 764 aaKnown RBP10.18□□□□□ -0.78
CPSF7-222ENST00000544585 OSBPP22059 807 aa10.18□□□□□ -0.78
CPSF7-222ENST00000544585 PARP9Q8IXQ6 854 aa10.18□□□□□ -0.78
CPSF7-222ENST00000544585 TMEM121BQ9BXQ6 578 aaPredicted RBP10.18□□□□□ -0.78
CPSF7-222ENST00000544585 ARAP3Q8WWN8 1544 aa10.17□□□□□ -0.78
CPSF7-222ENST00000544585 DISP3Q9P2K9 1392 aa10.17□□□□□ -0.78
CPSF7-222ENST00000544585 ARID4BQ4LE39 1312 aaPredicted RBP10.17□□□□□ -0.78
CPSF7-222ENST00000544585 FLIIQ13045 1269 aa10.17□□□□□ -0.78
CPSF7-222ENST00000544585 UPF1Q92900 1129 aaKnown RBP eCLIP10.17□□□□□ -0.78
CPSF7-222ENST00000544585 KIAA0556O60303 1618 aa10.16□□□□□ -0.78
CPSF7-222ENST00000544585 KIF3CO14782 793 aa10.16□□□□□ -0.78
CPSF7-222ENST00000544585 RAPGEF3O95398 923 aa10.16□□□□□ -0.78
CPSF7-222ENST00000544585 TTLL12Q14166 644 aaPredicted RBP10.16□□□□□ -0.78
CPSF7-222ENST00000544585 OCEL1Q9H607 264 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms