RNA–Protein interactions for RNA: ENST00000544381.3

MDH1-216, Transcript of malate dehydrogenase 1, humanhuman

TSL 2 BASIC

Gene MDH1, Length 1,346 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDH1-216ENST00000544381 SUPT6HQ7KZ85 1726 aaKnown RBP15.16■□□□□ 0.02
MDH1-216ENST00000544381 PREX1Q8TCU6 1659 aa15.15■□□□□ 0.02
MDH1-216ENST00000544381 PLEKHD1A6NEE1 506 aa15.15■□□□□ 0.02
MDH1-216ENST00000544381 CCNB3Q8WWL7 1395 aa15.14■□□□□ 0.01
MDH1-216ENST00000544381 KIF14Q15058 1648 aa15.14■□□□□ 0.01
MDH1-216ENST00000544381 PLCH2O75038 1416 aa15.14■□□□□ 0.01
MDH1-216ENST00000544381 MYO5CQ9NQX4 1742 aa15.14■□□□□ 0.01
MDH1-216ENST00000544381 SCAPERQ9BY12 1400 aa15.13■□□□□ 0.01
MDH1-216ENST00000544381 NCOA2Q15596 1464 aa15.11■□□□□ 0.01
MDH1-216ENST00000544381 KDM5CP41229 1560 aa15.11■□□□□ 0.01
MDH1-216ENST00000544381 CERKQ8TCT0 537 aa15.11■□□□□ 0.01
MDH1-216ENST00000544381 ZRANB1Q9UGI0 708 aa15.11■□□□□ 0.01
MDH1-216ENST00000544381 ATP10AO60312 1499 aa15.11■□□□□ 0.01
MDH1-216ENST00000544381 C9orf84Q5VXU9 1444 aa15.1■□□□□ 0.01
MDH1-216ENST00000544381 PAK3O75914 559 aaPredicted RBP15.09■□□□□ 0.01
MDH1-216ENST00000544381 MLECQ14165 292 aa15.09■□□□□ 0.01
MDH1-216ENST00000544381 DIP2CQ9Y2E4 1556 aa15.08■□□□□ 0
MDH1-216ENST00000544381 ABCA6Q8N139 1617 aa15.07■□□□□ 0
MDH1-216ENST00000544381 GABBR2O75899 941 aa15.07■□□□□ 0
MDH1-216ENST00000544381 FAM50AQ14320 339 aaKnown RBP15.07■□□□□ 0
MDH1-216ENST00000544381 TROQ12816 1431 aaPredicted RBP15.07■□□□□ 0
MDH1-216ENST00000544381 MYOM3Q5VTT5 1437 aa15.07■□□□□ 0
MDH1-216ENST00000544381 REREQ9P2R6 1566 aa15.06■□□□□ 0
MDH1-216ENST00000544381 CDC42BPBQ9Y5S2 1711 aa15.06■□□□□ 0
MDH1-216ENST00000544381 C3P01024 1663 aa15.05■□□□□ 0
MDH1-216ENST00000544381 CEBPAP49715 358 aaPredicted RBP15.05■□□□□ -0
MDH1-216ENST00000544381 FGD6Q6ZV73 1430 aa15.05■□□□□ -0
MDH1-216ENST00000544381 SETD1BQ9UPS6 1966 aaKnown RBP15.05■□□□□ -0
MDH1-216ENST00000544381 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.03■□□□□ -0
MDH1-216ENST00000544381 ITGAEP38570 1179 aa15.03■□□□□ -0
MDH1-216ENST00000544381 ZNF579Q8NAF0 562 aaKnown RBP15.03■□□□□ -0
MDH1-216ENST00000544381 ZBTB47Q9UFB7 747 aaPredicted RBP15.03■□□□□ -0
MDH1-216ENST00000544381 ZNF518AQ6AHZ1 1483 aa15.03■□□□□ -0
MDH1-216ENST00000544381 HRCP23327 699 aa15.02■□□□□ -0
MDH1-216ENST00000544381 ILDR2Q71H61 639 aa15.02■□□□□ -0
MDH1-216ENST00000544381 LTBP4Q8N2S1 1624 aa15□□□□□ -0.01
MDH1-216ENST00000544381 ARHGAP5Q13017 1502 aa15□□□□□ -0.01
MDH1-216ENST00000544381 PREX2Q70Z35 1606 aa14.99□□□□□ -0.01
MDH1-216ENST00000544381 ITSN2Q9NZM3 1697 aa14.99□□□□□ -0.01
MDH1-216ENST00000544381 CLCN6P51797 869 aa14.99□□□□□ -0.01
MDH1-216ENST00000544381 AFAP1Q8N556 730 aa14.99□□□□□ -0.01
MDH1-216ENST00000544381 MIA2Q96PC5 1412 aa14.99□□□□□ -0.01
MDH1-216ENST00000544381 ABCC1P33527 1531 aa14.99□□□□□ -0.01
MDH1-216ENST00000544381 PTPN23Q9H3S7 1636 aa14.99□□□□□ -0.01
MDH1-216ENST00000544381 KIDINS220Q9ULH0 1771 aa14.99□□□□□ -0.01
MDH1-216ENST00000544381 EFCAB2Q5VUJ9 269 aa14.98□□□□□ -0.01
MDH1-216ENST00000544381 UHRF1BP1Q6BDS2 1440 aa14.98□□□□□ -0.01
MDH1-216ENST00000544381 MLH3Q9UHC1 1453 aa14.98□□□□□ -0.01
MDH1-216ENST00000544381 AGLP35573 1532 aa14.98□□□□□ -0.01
MDH1-216ENST00000544381 TRAPPC8Q9Y2L5 1435 aa14.96□□□□□ -0.01
MDH1-216ENST00000544381 VASPP50552 380 aaPredicted RBP14.96□□□□□ -0.01
MDH1-216ENST00000544381 CCER1Q8TC90 406 aaPredicted RBP14.96□□□□□ -0.01
MDH1-216ENST00000544381 PTPRTO14522 1441 aa14.96□□□□□ -0.02
MDH1-216ENST00000544381 TSPYL2Q9H2G4 693 aaPredicted RBP14.95□□□□□ -0.02
MDH1-216ENST00000544381 CDC42BPAQ5VT25 1732 aa14.95□□□□□ -0.02
MDH1-216ENST00000544381 TCOF1Q13428 1488 aaKnown RBP14.95□□□□□ -0.02
MDH1-216ENST00000544381 SPATA31D1Q6ZQQ2 1576 aa14.94□□□□□ -0.02
MDH1-216ENST00000544381 ZEB1P37275 1124 aaPredicted RBP14.93□□□□□ -0.02
MDH1-216ENST00000544381 PHF12Q96QT6 1004 aa14.92□□□□□ -0.02
MDH1-216ENST00000544381 CFDP1Q9UEE9 299 aaPredicted RBP14.92□□□□□ -0.02
MDH1-216ENST00000544381 NCOA1Q15788 1441 aa14.92□□□□□ -0.02
MDH1-216ENST00000544381 DISP3Q9P2K9 1392 aa14.92□□□□□ -0.02
MDH1-216ENST00000544381 GPATCH8Q9UKJ3 1502 aaKnown RBP14.92□□□□□ -0.02
MDH1-216ENST00000544381 MROH2AA6NES4 1674 aa14.91□□□□□ -0.02
MDH1-216ENST00000544381 RASEFQ8IZ41 740 aa14.9□□□□□ -0.02
MDH1-216ENST00000544381 SAMD9LQ8IVG5 1584 aa14.89□□□□□ -0.03
MDH1-216ENST00000544381 SETD5Q9C0A6 1442 aa14.88□□□□□ -0.03
MDH1-216ENST00000544381 SOCS7O14512 581 aa14.88□□□□□ -0.03
MDH1-216ENST00000544381 IQSEC2Q5JU85 1478 aa14.87□□□□□ -0.03
MDH1-216ENST00000544381 ZNF142P52746 1687 aaPredicted RBP14.87□□□□□ -0.03
MDH1-216ENST00000544381 ZNF777Q9ULD5 760 aaPredicted RBP14.87□□□□□ -0.03
MDH1-216ENST00000544381 CAMSAP1Q5T5Y3 1602 aa14.87□□□□□ -0.03
MDH1-216ENST00000544381 PLXNC1O60486 1568 aa14.86□□□□□ -0.03
MDH1-216ENST00000544381 CAMSAP2Q08AD1 1489 aa14.86□□□□□ -0.03
MDH1-216ENST00000544381 ZNF644Q9H582 1327 aaPredicted RBP14.85□□□□□ -0.03
MDH1-216ENST00000544381 NUBP1P53384 320 aa14.85□□□□□ -0.03
MDH1-216ENST00000544381 KLHL34Q8N239 644 aa14.85□□□□□ -0.03
MDH1-216ENST00000544381 MYO3AQ8NEV4 1616 aa14.84□□□□□ -0.03
MDH1-216ENST00000544381 SYCP2Q9BX26 1530 aa14.84□□□□□ -0.03
MDH1-216ENST00000544381 PTPRKQ15262 1439 aa14.84□□□□□ -0.03
MDH1-216ENST00000544381 INO80Q9ULG1 1556 aaPredicted RBP14.84□□□□□ -0.03
MDH1-216ENST00000544381 RAB3GAP2Q9H2M9 1393 aa14.84□□□□□ -0.03
MDH1-216ENST00000544381 CCDC61Q9Y6R9 512 aa14.84□□□□□ -0.03
MDH1-216ENST00000544381 NPATQ14207 1427 aa14.83□□□□□ -0.03
MDH1-216ENST00000544381 CNTLNQ9NXG0 1405 aa14.83□□□□□ -0.03
MDH1-216ENST00000544381 CLTCQ00610 1675 aaKnown RBP14.83□□□□□ -0.04
MDH1-216ENST00000544381 DNMT1P26358 1616 aaKnown RBP14.83□□□□□ -0.04
MDH1-216ENST00000544381 DAPK1P53355 1430 aa14.83□□□□□ -0.04
MDH1-216ENST00000544381 GALR2O43603 387 aaPredicted RBP14.81□□□□□ -0.04
MDH1-216ENST00000544381 CHIC2Q9UKJ5 165 aa14.81□□□□□ -0.04
MDH1-216ENST00000544381 HFM1A2PYH4 1435 aa14.8□□□□□ -0.04
MDH1-216ENST00000544381 ABCC5O15440 1437 aa14.8□□□□□ -0.04
MDH1-216ENST00000544381 ATP7AQ04656 1500 aa14.8□□□□□ -0.04
MDH1-216ENST00000544381 ZMYM3Q14202 1370 aa14.79□□□□□ -0.04
MDH1-216ENST00000544381 CEP170BQ9Y4F5 1589 aaPredicted RBP14.79□□□□□ -0.04
MDH1-216ENST00000544381 DCBLD2Q96PD2 775 aa14.78□□□□□ -0.04
MDH1-216ENST00000544381 RRP7BPQ9NSQ0 103 aa14.78□□□□□ -0.04
MDH1-216ENST00000544381 ZNF335Q9H4Z2 1342 aaPredicted RBP14.78□□□□□ -0.04
MDH1-216ENST00000544381 PLA2R1Q13018 1463 aa14.77□□□□□ -0.04
MDH1-216ENST00000544381 FAM212AQ96EL1 285 aa14.77□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms