RNA–Protein interactions for RNA: ENST00000544216.7

LSM14A-203, Transcript of LSM14A, mRNA processing body assembly factor, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LSM14A, Length 3,596 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM14A-203ENST00000544216 UHRF1BP1Q6BDS2 1440 aa18.87■□□□□ 0.61
LSM14A-203ENST00000544216 RALGAPBQ86X10 1494 aa18.87■□□□□ 0.61
LSM14A-203ENST00000544216 BCORL1Q5H9F3 1711 aa18.87■□□□□ 0.61
LSM14A-203ENST00000544216 ZBED9Q6R2W3 1325 aa18.86■□□□□ 0.61
LSM14A-203ENST00000544216 ARID4BQ4LE39 1312 aaPredicted RBP18.85■□□□□ 0.61
LSM14A-203ENST00000544216 SALL2Q9Y467 1007 aaPredicted RBP18.85■□□□□ 0.61
LSM14A-203ENST00000544216 ARHGEF12Q9NZN5 1544 aa18.84■□□□□ 0.61
LSM14A-203ENST00000544216 PLCH2O75038 1416 aa18.84■□□□□ 0.61
LSM14A-203ENST00000544216 KDM5DQ9BY66 1539 aa18.84■□□□□ 0.61
LSM14A-203ENST00000544216 TRAPPC8Q9Y2L5 1435 aa18.84■□□□□ 0.61
LSM14A-203ENST00000544216 KDM5CP41229 1560 aa18.83■□□□□ 0.6
LSM14A-203ENST00000544216 SHROOM2Q13796 1616 aa18.83■□□□□ 0.6
LSM14A-203ENST00000544216 PLA2R1Q13018 1463 aa18.81■□□□□ 0.6
LSM14A-203ENST00000544216 CC2D1BQ5T0F9 858 aaKnown RBP18.8■□□□□ 0.6
LSM14A-203ENST00000544216 KIF3BO15066 747 aa18.79■□□□□ 0.6
LSM14A-203ENST00000544216 PRAG1Q86YV5 1406 aa18.79■□□□□ 0.6
LSM14A-203ENST00000544216 MYO5CQ9NQX4 1742 aa18.78■□□□□ 0.6
LSM14A-203ENST00000544216 PNISRQ8TF01 805 aaKnown RBP18.78■□□□□ 0.6
LSM14A-203ENST00000544216 B4GALNT3Q6L9W6 998 aa18.77■□□□□ 0.6
LSM14A-203ENST00000544216 ZCCHC11Q5TAX3 1644 aaKnown RBP18.75■□□□□ 0.59
LSM14A-203ENST00000544216 DUOX2Q9NRD8 1548 aa18.75■□□□□ 0.59
LSM14A-203ENST00000544216 RBM19Q9Y4C8 960 aaKnown RBP18.75■□□□□ 0.59
LSM14A-203ENST00000544216 A2MP01023 1474 aa18.75■□□□□ 0.59
LSM14A-203ENST00000544216 PPP4R2Q9NY27 417 aa18.75■□□□□ 0.59
LSM14A-203ENST00000544216 RALBP1Q15311 655 aa18.74■□□□□ 0.59
LSM14A-203ENST00000544216 MYBBP1AQ9BQG0 1328 aaKnown RBP18.74■□□□□ 0.59
LSM14A-203ENST00000544216 NPM1P06748 294 aaKnown RBP eCLIP18.73■□□□□ 0.59
LSM14A-203ENST00000544216 PANK3Q9H999 370 aa18.73■□□□□ 0.59
LSM14A-203ENST00000544216 TMF1P82094 1093 aa18.73■□□□□ 0.59
LSM14A-203ENST00000544216 POLR1AO95602 1720 aaPredicted RBP18.72■□□□□ 0.59
LSM14A-203ENST00000544216 ERBINQ96RT1 1412 aa18.71■□□□□ 0.59
LSM14A-203ENST00000544216 SCAPERQ9BY12 1400 aa18.71■□□□□ 0.59
LSM14A-203ENST00000544216 KTN1Q86UP2 1357 aaKnown RBP18.71■□□□□ 0.59
LSM14A-203ENST00000544216 MAST1Q9Y2H9 1570 aa18.7■□□□□ 0.58
LSM14A-203ENST00000544216 CLASP1Q7Z460 1538 aa18.7■□□□□ 0.58
LSM14A-203ENST00000544216 NUDCQ9Y266 331 aa18.7■□□□□ 0.58
LSM14A-203ENST00000544216 DISP3Q9P2K9 1392 aa18.69■□□□□ 0.58
LSM14A-203ENST00000544216 CHGAP10645 457 aaKnown RBP18.69■□□□□ 0.58
LSM14A-203ENST00000544216 TESK2Q96S53 571 aa18.69■□□□□ 0.58
LSM14A-203ENST00000544216 UHRF1BP1LA0JNW5 1464 aa18.69■□□□□ 0.58
LSM14A-203ENST00000544216 UNC13BO14795 1591 aa18.67■□□□□ 0.58
LSM14A-203ENST00000544216 NLRP13Q86W25 1043 aa18.67■□□□□ 0.58
LSM14A-203ENST00000544216 KANK1Q14678 1352 aa18.67■□□□□ 0.58
LSM14A-203ENST00000544216 ABCC1P33527 1531 aa18.66■□□□□ 0.58
LSM14A-203ENST00000544216 PLXNC1O60486 1568 aa18.66■□□□□ 0.58
LSM14A-203ENST00000544216 FANCAO15360 1455 aa18.66■□□□□ 0.58
LSM14A-203ENST00000544216 BRD4O60885 1362 aaPredicted RBP18.65■□□□□ 0.58
LSM14A-203ENST00000544216 ERICH6BQ5W0A0 696 aa18.65■□□□□ 0.58
LSM14A-203ENST00000544216 WDR7Q9Y4E6 1490 aa18.65■□□□□ 0.58
LSM14A-203ENST00000544216 PER1O15534 1290 aaPredicted RBP18.64■□□□□ 0.57
LSM14A-203ENST00000544216 IQGAP3Q86VI3 1631 aa18.64■□□□□ 0.57
LSM14A-203ENST00000544216 GPRASP1Q5JY77 1395 aa18.63■□□□□ 0.57
LSM14A-203ENST00000544216 GGT6Q6P531 493 aa18.62■□□□□ 0.57
LSM14A-203ENST00000544216 OSCARQ8IYS5 282 aa18.62■□□□□ 0.57
LSM14A-203ENST00000544216 TRPM1Q7Z4N2 1603 aa18.61■□□□□ 0.57
LSM14A-203ENST00000544216 KNSTRNQ9Y448 316 aa18.61■□□□□ 0.57
LSM14A-203ENST00000544216 ADGRL1O94910 1474 aa18.61■□□□□ 0.57
LSM14A-203ENST00000544216 SMG6Q86US8 1419 aaKnown RBP18.61■□□□□ 0.57
LSM14A-203ENST00000544216 ASXL2Q76L83 1435 aa18.6■□□□□ 0.57
LSM14A-203ENST00000544216 CCDC136Q96JN2 1154 aa18.6■□□□□ 0.57
LSM14A-203ENST00000544216 RTEL1-TNFRSF6BF6WH68 1400 aa18.58■□□□□ 0.57
LSM14A-203ENST00000544216 CFAP70Q5T0N1 1121 aa18.58■□□□□ 0.57
LSM14A-203ENST00000544216 SENP3Q9H4L4 574 aaPredicted RBP18.58■□□□□ 0.56
LSM14A-203ENST00000544216 ATP10AO60312 1499 aa18.56■□□□□ 0.56
LSM14A-203ENST00000544216 PARD3Q8TEW0 1356 aa18.56■□□□□ 0.56
LSM14A-203ENST00000544216 COL17A1Q9UMD9 1497 aaPredicted RBP18.56■□□□□ 0.56
LSM14A-203ENST00000544216 MAGI2Q86UL8 1455 aa18.56■□□□□ 0.56
LSM14A-203ENST00000544216 ZFYVE16Q7Z3T8 1539 aa18.55■□□□□ 0.56
LSM14A-203ENST00000544216 CDCA7LQ96GN5 454 aa18.55■□□□□ 0.56
LSM14A-203ENST00000544216 LRPPRCP42704 1394 aaKnown RBP18.54■□□□□ 0.56
LSM14A-203ENST00000544216 ATP7AQ04656 1500 aa18.53■□□□□ 0.56
LSM14A-203ENST00000544216 CDCA8Q53HL2 280 aa18.53■□□□□ 0.56
LSM14A-203ENST00000544216 ADGRF5Q8IZF2 1346 aa18.52■□□□□ 0.56
LSM14A-203ENST00000544216 PRDM15P57071 1507 aaPredicted RBP18.52■□□□□ 0.56
LSM14A-203ENST00000544216 E9PCH4 1651 aa18.51■□□□□ 0.55
LSM14A-203ENST00000544216 RCAN3Q9UKA8 241 aa18.51■□□□□ 0.55
LSM14A-203ENST00000544216 WASHC2CQ9Y4E1 1318 aa18.5■□□□□ 0.55
LSM14A-203ENST00000544216 EIF2AK4Q9P2K8 1649 aaKnown RBP18.5■□□□□ 0.55
LSM14A-203ENST00000544216 WDR43Q15061 677 aaKnown RBP eCLIP18.5■□□□□ 0.55
LSM14A-203ENST00000544216 NUTM2DQ5VT03 806 aaPredicted RBP18.5■□□□□ 0.55
LSM14A-203ENST00000544216 RAPGEF3O95398 923 aa18.49■□□□□ 0.55
LSM14A-203ENST00000544216 ADAMTS8Q9UP79 889 aa18.49■□□□□ 0.55
LSM14A-203ENST00000544216 MYT1Q01538 1121 aa18.48■□□□□ 0.55
LSM14A-203ENST00000544216 STAC3Q96MF2 364 aa18.47■□□□□ 0.55
LSM14A-203ENST00000544216 UGGT1Q9NYU2 1555 aa18.47■□□□□ 0.55
LSM14A-203ENST00000544216 ANP32EQ9BTT0 268 aa18.47■□□□□ 0.55
LSM14A-203ENST00000544216 PTPRTO14522 1441 aa18.47■□□□□ 0.55
LSM14A-203ENST00000544216 CD109Q6YHK3 1445 aa18.47■□□□□ 0.55
LSM14A-203ENST00000544216 PPP2R1AP30153 589 aa18.46■□□□□ 0.55
LSM14A-203ENST00000544216 ARAP3Q8WWN8 1544 aa18.46■□□□□ 0.55
LSM14A-203ENST00000544216 TRAK1Q9UPV9 953 aa18.46■□□□□ 0.55
LSM14A-203ENST00000544216 TRPM2O94759 1503 aa18.46■□□□□ 0.55
LSM14A-203ENST00000544216 SCAF11Q99590 1463 aaKnown RBP18.45■□□□□ 0.54
LSM14A-203ENST00000544216 RRP1P56182 461 aaKnown RBP18.45■□□□□ 0.54
LSM14A-203ENST00000544216 EIF3AQ14152 1382 aaKnown RBP18.45■□□□□ 0.54
LSM14A-203ENST00000544216 CLTCL1P53675 1640 aa18.44■□□□□ 0.54
LSM14A-203ENST00000544216 PLIN1O60240 522 aa18.44■□□□□ 0.54
LSM14A-203ENST00000544216 EXOC6Q8TAG9 804 aa18.44■□□□□ 0.54
LSM14A-203ENST00000544216 TMEM132EQ6IEE7 984 aa18.43■□□□□ 0.54
LSM14A-203ENST00000544216 ERICH6Q7L0X2 663 aa18.43■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms