RNA–Protein interactions for RNA: ENST00000543898.5

ABCB1-210, Transcript of ATP binding cassette subfamily B member 1, humanhuman

TSL 5 BASIC

Gene ABCB1, Length 4,524 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCB1-210ENST00000543898 NBPF1Q3BBV0 1214 aa10.98□□□□□ -0.65
ABCB1-210ENST00000543898 APAF1O14727 1248 aa10.97□□□□□ -0.65
ABCB1-210ENST00000543898 RNF123Q5XPI4 1314 aa10.97□□□□□ -0.65
ABCB1-210ENST00000543898 FTSJ3Q8IY81 847 aaKnown RBP10.96□□□□□ -0.65
ABCB1-210ENST00000543898 BCL2L13Q9BXK5 485 aa10.96□□□□□ -0.66
ABCB1-210ENST00000543898 ZMYND15Q9H091 742 aa10.96□□□□□ -0.66
ABCB1-210ENST00000543898 POGKQ9P215 609 aa10.96□□□□□ -0.66
ABCB1-210ENST00000543898 SENP3Q9H4L4 574 aaPredicted RBP10.96□□□□□ -0.66
ABCB1-210ENST00000543898 RPRD2Q5VT52 1461 aaKnown RBP10.95□□□□□ -0.66
ABCB1-210ENST00000543898 CDCA8Q53HL2 280 aa10.95□□□□□ -0.66
ABCB1-210ENST00000543898 DHX29Q7Z478 1369 aaKnown RBP10.95□□□□□ -0.66
ABCB1-210ENST00000543898 MFAP1P55081 439 aaKnown RBP10.95□□□□□ -0.66
ABCB1-210ENST00000543898 SUPT6HQ7KZ85 1726 aaKnown RBP10.94□□□□□ -0.66
ABCB1-210ENST00000543898 MIA2Q96PC5 1412 aa10.94□□□□□ -0.66
ABCB1-210ENST00000543898 EHBP1L1Q8N3D4 1523 aa10.94□□□□□ -0.66
ABCB1-210ENST00000543898 BCAR3O75815 825 aa10.94□□□□□ -0.66
ABCB1-210ENST00000543898 RRP7AQ9Y3A4 280 aaKnown RBP10.94□□□□□ -0.66
ABCB1-210ENST00000543898 NCLP19338 710 aaKnown RBP10.94□□□□□ -0.66
ABCB1-210ENST00000543898 FAM43AQ8N2R8 423 aa10.94□□□□□ -0.66
ABCB1-210ENST00000543898 WASHC2CQ9Y4E1 1318 aa10.93□□□□□ -0.66
ABCB1-210ENST00000543898 GAPVD1Q14C86 1478 aa10.93□□□□□ -0.66
ABCB1-210ENST00000543898 PANK1Q8TE04 598 aa10.93□□□□□ -0.66
ABCB1-210ENST00000543898 DAPK1P53355 1430 aa10.92□□□□□ -0.66
ABCB1-210ENST00000543898 HSP90AA2PQ14568 343 aaPredicted RBP10.92□□□□□ -0.66
ABCB1-210ENST00000543898 CENPJQ9HC77 1338 aaPredicted RBP10.92□□□□□ -0.66
ABCB1-210ENST00000543898 POLA1P09884 1462 aaPredicted RBP10.92□□□□□ -0.66
ABCB1-210ENST00000543898 HSCBQ8IWL3 235 aa10.92□□□□□ -0.66
ABCB1-210ENST00000543898 KIAA1107Q9UPP5 1409 aa10.92□□□□□ -0.66
ABCB1-210ENST00000543898 CDK13Q14004 1512 aaKnown RBP10.91□□□□□ -0.66
ABCB1-210ENST00000543898 CFAP43Q8NDM7 1665 aa10.91□□□□□ -0.66
ABCB1-210ENST00000543898 HSP90AB1P08238 724 aaKnown RBP10.91□□□□□ -0.66
ABCB1-210ENST00000543898 MYH16Q9H6N6 1097 aa10.91□□□□□ -0.66
ABCB1-210ENST00000543898 HMGXB3Q12766 1538 aa10.9□□□□□ -0.66
ABCB1-210ENST00000543898 FOXD4L1Q9NU39 408 aa10.9□□□□□ -0.66
ABCB1-210ENST00000543898 ANKRD50Q9ULJ7 1429 aa10.9□□□□□ -0.66
ABCB1-210ENST00000543898 TULP1O00294 542 aaPredicted RBP10.9□□□□□ -0.66
ABCB1-210ENST00000543898 NCBP3Q53F19 620 aaKnown RBP10.9□□□□□ -0.66
ABCB1-210ENST00000543898 PAXIP1Q6ZW49 1069 aaPredicted RBP10.89□□□□□ -0.67
ABCB1-210ENST00000543898 RWDD1Q9H446 243 aaPredicted RBP10.89□□□□□ -0.67
ABCB1-210ENST00000543898 MAPK8IP3Q9UPT6 1336 aa10.89□□□□□ -0.67
ABCB1-210ENST00000543898 PLPPR3Q6T4P5 718 aa10.89□□□□□ -0.67
ABCB1-210ENST00000543898 CCDC144AA2RUR9 1427 aa10.89□□□□□ -0.67
ABCB1-210ENST00000543898 ABCC5O15440 1437 aa10.88□□□□□ -0.67
ABCB1-210ENST00000543898 PPP2R1AP30153 589 aa10.88□□□□□ -0.67
ABCB1-210ENST00000543898 PMFBP1Q8TBY8 1022 aa10.88□□□□□ -0.67
ABCB1-210ENST00000543898 PDS5BQ9NTI5 1447 aa10.88□□□□□ -0.67
ABCB1-210ENST00000543898 CGNL1Q0VF96 1302 aa10.88□□□□□ -0.67
ABCB1-210ENST00000543898 NESP48681 1621 aa10.87□□□□□ -0.67
ABCB1-210ENST00000543898 E9PSI1 815 aa10.87□□□□□ -0.67
ABCB1-210ENST00000543898 ARID3AQ99856 593 aa10.87□□□□□ -0.67
ABCB1-210ENST00000543898 GOLGA6L22H0YM25 854 aa10.87□□□□□ -0.67
ABCB1-210ENST00000543898 C8orf34Q49A92 452 aa10.87□□□□□ -0.67
ABCB1-210ENST00000543898 EPRSP07814 1512 aaKnown RBP10.87□□□□□ -0.67
ABCB1-210ENST00000543898 TOPBP1Q92547 1522 aa10.87□□□□□ -0.67
ABCB1-210ENST00000543898 RBM10P98175 930 aaKnown RBP10.87□□□□□ -0.67
ABCB1-210ENST00000543898 MORC1Q86VD1 984 aa10.87□□□□□ -0.67
ABCB1-210ENST00000543898 ROCK1Q13464 1354 aa10.85□□□□□ -0.67
ABCB1-210ENST00000543898 U2SURPO15042 1029 aaKnown RBP10.85□□□□□ -0.67
ABCB1-210ENST00000543898 DUSP27Q5VZP5 1158 aa10.85□□□□□ -0.67
ABCB1-210ENST00000543898 CFAP53Q96M91 514 aa10.85□□□□□ -0.67
ABCB1-210ENST00000543898 SNAPC4Q5SXM2 1469 aa10.85□□□□□ -0.67
ABCB1-210ENST00000543898 SPATA31E1Q6ZUB1 1445 aa10.85□□□□□ -0.67
ABCB1-210ENST00000543898 ABCA10Q8WWZ4 1543 aa10.85□□□□□ -0.67
ABCB1-210ENST00000543898 ITPRIPQ8IWB1 547 aa10.85□□□□□ -0.67
ABCB1-210ENST00000543898 DHX37Q8IY37 1157 aaKnown RBP10.84□□□□□ -0.67
ABCB1-210ENST00000543898 PRG4Q92954 1404 aaPredicted RBP10.84□□□□□ -0.67
ABCB1-210ENST00000543898 ZBTB7CA1YPR0 619 aa10.84□□□□□ -0.67
ABCB1-210ENST00000543898 TAF7LQ5H9L4 462 aa10.84□□□□□ -0.67
ABCB1-210ENST00000543898 IGHDP01880 384 aa10.84□□□□□ -0.67
ABCB1-210ENST00000543898 GRIN2BQ13224 1484 aa10.84□□□□□ -0.67
ABCB1-210ENST00000543898 LRPPRCP42704 1394 aaKnown RBP10.83□□□□□ -0.68
ABCB1-210ENST00000543898 UGGT2Q9NYU1 1516 aa10.83□□□□□ -0.68
ABCB1-210ENST00000543898 TRAK2O60296 914 aa10.83□□□□□ -0.68
ABCB1-210ENST00000543898 TPRNQ4KMQ1 711 aa10.83□□□□□ -0.68
ABCB1-210ENST00000543898 U2AF1L5P0DN76 240 aaPredicted RBP10.83□□□□□ -0.68
ABCB1-210ENST00000543898 U2AF1Q01081 240 aaKnown RBP eCLIP10.83□□□□□ -0.68
ABCB1-210ENST00000543898 SLFN5Q08AF3 891 aa10.83□□□□□ -0.68
ABCB1-210ENST00000543898 PRDM2Q13029 1718 aa10.83□□□□□ -0.68
ABCB1-210ENST00000543898 CHMP5Q9NZZ3 219 aa10.82□□□□□ -0.68
ABCB1-210ENST00000543898 PDZRN3Q9UPQ7 1066 aa10.82□□□□□ -0.68
ABCB1-210ENST00000543898 SEC24BO95487 1268 aa10.82□□□□□ -0.68
ABCB1-210ENST00000543898 MSNP26038 577 aaKnown RBP10.82□□□□□ -0.68
ABCB1-210ENST00000543898 GBP4Q96PP9 640 aa10.82□□□□□ -0.68
ABCB1-210ENST00000543898 TEX14Q8IWB6 1497 aa10.81□□□□□ -0.68
ABCB1-210ENST00000543898 C14orf37Q86TY3 774 aa10.81□□□□□ -0.68
ABCB1-210ENST00000543898 C22orf23Q9BZE7 217 aa10.81□□□□□ -0.68
ABCB1-210ENST00000543898 SMC4Q9NTJ3 1288 aa10.81□□□□□ -0.68
ABCB1-210ENST00000543898 KDM6BO15054 1643 aa10.81□□□□□ -0.68
ABCB1-210ENST00000543898 FGD1P98174 961 aa10.8□□□□□ -0.68
ABCB1-210ENST00000543898 MCM4P33991 863 aa10.8□□□□□ -0.68
ABCB1-210ENST00000543898 KDM5BQ9UGL1 1544 aa10.79□□□□□ -0.68
ABCB1-210ENST00000543898 PANK2Q9BZ23 570 aa10.79□□□□□ -0.68
ABCB1-210ENST00000543898 DDX11L8A8MPP1 907 aa10.79□□□□□ -0.68
ABCB1-210ENST00000543898 HECW1Q76N89 1606 aa10.79□□□□□ -0.68
ABCB1-210ENST00000543898 JPH4Q96JJ6 628 aa10.79□□□□□ -0.68
ABCB1-210ENST00000543898 TBC1D2Q9BYX2 928 aa10.79□□□□□ -0.68
ABCB1-210ENST00000543898 RRAGDQ9NQL2 400 aaPredicted RBP10.79□□□□□ -0.68
ABCB1-210ENST00000543898 PER1O15534 1290 aaPredicted RBP10.78□□□□□ -0.68
ABCB1-210ENST00000543898 MRE11P49959 708 aa10.78□□□□□ -0.68
ABCB1-210ENST00000543898 PTMAP06454 111 aaKnown RBP10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms