RNA–Protein interactions for RNA: ENST00000543872.6

SMG8-202, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMG8, Length 3,477 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-202ENST00000543872 ZNF777Q9ULD5 760 aaPredicted RBP16.29■□□□□ 0.2
SMG8-202ENST00000543872 GRIN2BQ13224 1484 aa16.29■□□□□ 0.2
SMG8-202ENST00000543872 CLCN1P35523 988 aa16.29■□□□□ 0.2
SMG8-202ENST00000543872 USP19O94966 1318 aa16.28■□□□□ 0.2
SMG8-202ENST00000543872 TCOF1Q13428 1488 aaKnown RBP16.27■□□□□ 0.2
SMG8-202ENST00000543872 PDE4CQ08493 712 aa16.27■□□□□ 0.19
SMG8-202ENST00000543872 IGHDP01880 384 aa16.26■□□□□ 0.19
SMG8-202ENST00000543872 LRRIQ1Q96JM4 1722 aa16.26■□□□□ 0.19
SMG8-202ENST00000543872 DUSP27Q5VZP5 1158 aa16.25■□□□□ 0.19
SMG8-202ENST00000543872 CADPSQ9ULU8 1353 aa16.25■□□□□ 0.19
SMG8-202ENST00000543872 WDR43Q15061 677 aaKnown RBP eCLIP16.24■□□□□ 0.19
SMG8-202ENST00000543872 PANK3Q9H999 370 aa16.24■□□□□ 0.19
SMG8-202ENST00000543872 BCAR3O75815 825 aa16.24■□□□□ 0.19
SMG8-202ENST00000543872 GOLGA2Q08379 1002 aa16.24■□□□□ 0.19
SMG8-202ENST00000543872 PARD3Q8TEW0 1356 aa16.24■□□□□ 0.19
SMG8-202ENST00000543872 DAPK1P53355 1430 aa16.23■□□□□ 0.19
SMG8-202ENST00000543872 UPF2Q9HAU5 1272 aaKnown RBP16.23■□□□□ 0.19
SMG8-202ENST00000543872 MYH16Q9H6N6 1097 aa16.22■□□□□ 0.19
SMG8-202ENST00000543872 PER1O15534 1290 aaPredicted RBP16.22■□□□□ 0.19
SMG8-202ENST00000543872 ABCC5O15440 1437 aa16.22■□□□□ 0.19
SMG8-202ENST00000543872 KDM5CP41229 1560 aa16.22■□□□□ 0.19
SMG8-202ENST00000543872 RGL3Q3MIN7 710 aa16.22■□□□□ 0.19
SMG8-202ENST00000543872 HMGXB3Q12766 1538 aa16.22■□□□□ 0.19
SMG8-202ENST00000543872 MCM4P33991 863 aa16.21■□□□□ 0.19
SMG8-202ENST00000543872 TDRD9Q8NDG6 1382 aaKnown RBP16.21■□□□□ 0.19
SMG8-202ENST00000543872 TBC1D2Q9BYX2 928 aa16.21■□□□□ 0.19
SMG8-202ENST00000543872 CANXP27824 592 aaKnown RBP16.21■□□□□ 0.18
SMG8-202ENST00000543872 CCDC146Q8IYE0 955 aa16.21■□□□□ 0.18
SMG8-202ENST00000543872 ANTXR1Q9H6X2 564 aa16.21■□□□□ 0.18
SMG8-202ENST00000543872 KIAA1107Q9UPP5 1409 aa16.2■□□□□ 0.18
SMG8-202ENST00000543872 ESPNB1AK53 854 aa16.2■□□□□ 0.18
SMG8-202ENST00000543872 TRAK2O60296 914 aa16.2■□□□□ 0.18
SMG8-202ENST00000543872 TRIM44Q96DX7 344 aaPredicted RBP16.2■□□□□ 0.18
SMG8-202ENST00000543872 PLEKHH1Q9ULM0 1364 aa16.19■□□□□ 0.18
SMG8-202ENST00000543872 ARHGEF11O15085 1522 aa16.19■□□□□ 0.18
SMG8-202ENST00000543872 ROCK1Q13464 1354 aa16.19■□□□□ 0.18
SMG8-202ENST00000543872 PZPP20742 1482 aa16.19■□□□□ 0.18
SMG8-202ENST00000543872 CDK13Q14004 1512 aaKnown RBP16.19■□□□□ 0.18
SMG8-202ENST00000543872 FSD2A1L4K1 749 aa16.18■□□□□ 0.18
SMG8-202ENST00000543872 MBD5Q9P267 1494 aa16.18■□□□□ 0.18
SMG8-202ENST00000543872 NBPF1Q3BBV0 1214 aa16.18■□□□□ 0.18
SMG8-202ENST00000543872 COG6Q9Y2V7 657 aa16.18■□□□□ 0.18
SMG8-202ENST00000543872 CTTNBP2Q8WZ74 1663 aa16.17■□□□□ 0.18
SMG8-202ENST00000543872 MRE11P49959 708 aa16.17■□□□□ 0.18
SMG8-202ENST00000543872 PANK1Q8TE04 598 aa16.16■□□□□ 0.18
SMG8-202ENST00000543872 ERBB4Q15303 1308 aa16.16■□□□□ 0.18
SMG8-202ENST00000543872 GRPEL1Q9HAV7 217 aa16.15■□□□□ 0.18
SMG8-202ENST00000543872 CFDP1Q9UEE9 299 aaPredicted RBP16.15■□□□□ 0.18
SMG8-202ENST00000543872 THOC2Q8NI27 1593 aaKnown RBP16.15■□□□□ 0.18
SMG8-202ENST00000543872 SPINK5Q9NQ38 1064 aaPredicted RBP16.14■□□□□ 0.17
SMG8-202ENST00000543872 PRDM4Q9UKN5 801 aa16.14■□□□□ 0.17
SMG8-202ENST00000543872 NUP155O75694 1391 aa16.14■□□□□ 0.17
SMG8-202ENST00000543872 RALGAPBQ86X10 1494 aa16.14■□□□□ 0.17
SMG8-202ENST00000543872 BLMP54132 1417 aaPredicted RBP16.14■□□□□ 0.17
SMG8-202ENST00000543872 CC2D2AQ9P2K1 1620 aa16.14■□□□□ 0.17
SMG8-202ENST00000543872 BCL11BQ9C0K0 894 aaPredicted RBP16.14■□□□□ 0.17
SMG8-202ENST00000543872 SLFN5Q08AF3 891 aa16.13■□□□□ 0.17
SMG8-202ENST00000543872 EPRSP07814 1512 aaKnown RBP16.13■□□□□ 0.17
SMG8-202ENST00000543872 MAPK8IP3Q9UPT6 1336 aa16.13■□□□□ 0.17
SMG8-202ENST00000543872 POLA1P09884 1462 aaPredicted RBP16.13■□□□□ 0.17
SMG8-202ENST00000543872 KIF14Q15058 1648 aa16.13■□□□□ 0.17
SMG8-202ENST00000543872 ABCA10Q8WWZ4 1543 aa16.12■□□□□ 0.17
SMG8-202ENST00000543872 APAF1O14727 1248 aa16.12■□□□□ 0.17
SMG8-202ENST00000543872 FANCD2Q9BXW9 1451 aa16.11■□□□□ 0.17
SMG8-202ENST00000543872 ZMYM4Q5VZL5 1548 aa16.11■□□□□ 0.17
SMG8-202ENST00000543872 CLUAP1Q96AJ1 413 aa16.11■□□□□ 0.17
SMG8-202ENST00000543872 TBC1D32Q96NH3 1257 aa16.11■□□□□ 0.17
SMG8-202ENST00000543872 CHMP5Q9NZZ3 219 aa16.1■□□□□ 0.17
SMG8-202ENST00000543872 ARID3AQ99856 593 aa16.1■□□□□ 0.17
SMG8-202ENST00000543872 SAMD9Q5K651 1589 aa16.09■□□□□ 0.17
SMG8-202ENST00000543872 MFAP1P55081 439 aaKnown RBP16.09■□□□□ 0.17
SMG8-202ENST00000543872 KNSTRNQ9Y448 316 aa16.09■□□□□ 0.17
SMG8-202ENST00000543872 PPP2R1AP30153 589 aa16.09■□□□□ 0.17
SMG8-202ENST00000543872 KIAA1211Q6ZU35 1233 aa16.09■□□□□ 0.17
SMG8-202ENST00000543872 UHRF1BP1Q6BDS2 1440 aa16.08■□□□□ 0.17
SMG8-202ENST00000543872 CALD1Q05682 793 aaKnown RBP16.08■□□□□ 0.16
SMG8-202ENST00000543872 DISP3Q9P2K9 1392 aa16.07■□□□□ 0.16
SMG8-202ENST00000543872 PDCL3Q9H2J4 239 aa16.07■□□□□ 0.16
SMG8-202ENST00000543872 EIF3AQ14152 1382 aaKnown RBP16.07■□□□□ 0.16
SMG8-202ENST00000543872 CUL7Q14999 1698 aa16.06■□□□□ 0.16
SMG8-202ENST00000543872 CGNL1Q0VF96 1302 aa16.06■□□□□ 0.16
SMG8-202ENST00000543872 PDIA4P13667 645 aaKnown RBP16.06■□□□□ 0.16
SMG8-202ENST00000543872 PDZRN3Q9UPQ7 1066 aa16.06■□□□□ 0.16
SMG8-202ENST00000543872 PLEKHH2Q8IVE3 1493 aa16.06■□□□□ 0.16
SMG8-202ENST00000543872 TPM2P07951 284 aa16.06■□□□□ 0.16
SMG8-202ENST00000543872 TMF1P82094 1093 aa16.05■□□□□ 0.16
SMG8-202ENST00000543872 DMRT2Q9Y5R5 561 aa16.05■□□□□ 0.16
SMG8-202ENST00000543872 NEUROD2Q15784 382 aa16.05■□□□□ 0.16
SMG8-202ENST00000543872 GAS2L3Q86XJ1 694 aa16.04■□□□□ 0.16
SMG8-202ENST00000543872 ZNF521Q96K83 1311 aa16.04■□□□□ 0.16
SMG8-202ENST00000543872 AEBP2Q6ZN18 517 aaPredicted RBP16.03■□□□□ 0.16
SMG8-202ENST00000543872 BCL2L13Q9BXK5 485 aa16.03■□□□□ 0.16
SMG8-202ENST00000543872 C22orf23Q9BZE7 217 aa16.03■□□□□ 0.16
SMG8-202ENST00000543872 FAM13BQ9NYF5 915 aa16.03■□□□□ 0.16
SMG8-202ENST00000543872 TOPBP1Q92547 1522 aa16.03■□□□□ 0.16
SMG8-202ENST00000543872 PCDHB15Q9Y5E8 787 aa16.03■□□□□ 0.16
SMG8-202ENST00000543872 NESP48681 1621 aa16.03■□□□□ 0.16
SMG8-202ENST00000543872 CENPJQ9HC77 1338 aaPredicted RBP16.03■□□□□ 0.16
SMG8-202ENST00000543872 TNNQ9UQP3 1299 aa16.02■□□□□ 0.16
SMG8-202ENST00000543872 ANKRD50Q9ULJ7 1429 aa16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms