RNA–Protein interactions for RNA: ENST00000543091.1

LRP6-206, Transcript of LDL receptor related protein 6, humanhuman

TSL 1 (best) BASIC

Gene LRP6, Length 4,774 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP6-206ENST00000543091 TXNDC2Q86VQ3 553 aa10.51□□□□□ -0.73
LRP6-206ENST00000543091 NCOA1Q15788 1441 aa10.5□□□□□ -0.73
LRP6-206ENST00000543091 HDGFL2Q7Z4V5 671 aaPredicted RBP10.5□□□□□ -0.73
LRP6-206ENST00000543091 NEO1Q92859 1461 aa10.5□□□□□ -0.73
LRP6-206ENST00000543091 CLASP1Q7Z460 1538 aa10.5□□□□□ -0.73
LRP6-206ENST00000543091 CFAP53Q96M91 514 aa10.5□□□□□ -0.73
LRP6-206ENST00000543091 WDR43Q15061 677 aaKnown RBP eCLIP10.49□□□□□ -0.73
LRP6-206ENST00000543091 ANKLE2Q86XL3 938 aa10.49□□□□□ -0.73
LRP6-206ENST00000543091 SYCP2Q9BX26 1530 aa10.49□□□□□ -0.73
LRP6-206ENST00000543091 NAIPQ13075 1403 aa10.48□□□□□ -0.73
LRP6-206ENST00000543091 CFAP43Q8NDM7 1665 aa10.48□□□□□ -0.73
LRP6-206ENST00000543091 A2MP01023 1474 aa10.48□□□□□ -0.73
LRP6-206ENST00000543091 TRAK1Q9UPV9 953 aa10.48□□□□□ -0.73
LRP6-206ENST00000543091 TRAPPC8Q9Y2L5 1435 aa10.47□□□□□ -0.73
LRP6-206ENST00000543091 ERCC6L2Q5T890 1561 aa10.47□□□□□ -0.73
LRP6-206ENST00000543091 RPGRIP1LQ68CZ1 1315 aa10.46□□□□□ -0.73
LRP6-206ENST00000543091 RTEL1-TNFRSF6BF6WH68 1400 aa10.46□□□□□ -0.74
LRP6-206ENST00000543091 HSPA5P11021 654 aaKnown RBP10.46□□□□□ -0.74
LRP6-206ENST00000543091 TERF2IPQ9NYB0 399 aa10.45□□□□□ -0.74
LRP6-206ENST00000543091 NGDNQ8NEJ9 315 aaKnown RBP10.45□□□□□ -0.74
LRP6-206ENST00000543091 DUOX2Q9NRD8 1548 aa10.45□□□□□ -0.74
LRP6-206ENST00000543091 CFAP74Q9C0B2 1584 aa10.44□□□□□ -0.74
LRP6-206ENST00000543091 ERBINQ96RT1 1412 aa10.44□□□□□ -0.74
LRP6-206ENST00000543091 PPM1GO15355 546 aaPredicted RBP10.44□□□□□ -0.74
LRP6-206ENST00000543091 MRS2Q9HD23 443 aa10.44□□□□□ -0.74
LRP6-206ENST00000543091 PAK3O75914 559 aaPredicted RBP10.43□□□□□ -0.74
LRP6-206ENST00000543091 NUDCQ9Y266 331 aa10.43□□□□□ -0.74
LRP6-206ENST00000543091 ANKRD30BQ9BXX2 1392 aa10.43□□□□□ -0.74
LRP6-206ENST00000543091 EVC2Q86UK5 1308 aa10.42□□□□□ -0.74
LRP6-206ENST00000543091 TCOF1Q13428 1488 aaKnown RBP10.42□□□□□ -0.74
LRP6-206ENST00000543091 ZCCHC11Q5TAX3 1644 aaKnown RBP10.42□□□□□ -0.74
LRP6-206ENST00000543091 SHANK2Q9UPX8 1470 aa10.42□□□□□ -0.74
LRP6-206ENST00000543091 ATP10AO60312 1499 aa10.42□□□□□ -0.74
LRP6-206ENST00000543091 ATF3P18847 181 aa10.41□□□□□ -0.74
LRP6-206ENST00000543091 CEBPAP49715 358 aaPredicted RBP10.41□□□□□ -0.74
LRP6-206ENST00000543091 DMRT2Q9Y5R5 561 aa10.41□□□□□ -0.74
LRP6-206ENST00000543091 RIMBP3CA6NJZ7 1639 aa10.41□□□□□ -0.74
LRP6-206ENST00000543091 RIMBP3BA6NNM3 1639 aa10.41□□□□□ -0.74
LRP6-206ENST00000543091 RIMBP3Q9UFD9 1639 aa10.41□□□□□ -0.74
LRP6-206ENST00000543091 FAM9BQ8IZU0 186 aa10.41□□□□□ -0.74
LRP6-206ENST00000543091 MAPKBP1O60336 1514 aa10.4□□□□□ -0.74
LRP6-206ENST00000543091 A0A0G2JS52 829 aa10.4□□□□□ -0.74
LRP6-206ENST00000543091 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP10.4□□□□□ -0.74
LRP6-206ENST00000543091 PROSER2Q86WR7 435 aaPredicted RBP10.4□□□□□ -0.74
LRP6-206ENST00000543091 CNTLNQ9NXG0 1405 aa10.4□□□□□ -0.74
LRP6-206ENST00000543091 TNRQ92752 1358 aa10.4□□□□□ -0.74
LRP6-206ENST00000543091 MORC1Q86VD1 984 aa10.39□□□□□ -0.75
LRP6-206ENST00000543091 MINK1Q8N4C8 1332 aaPredicted RBP10.39□□□□□ -0.75
LRP6-206ENST00000543091 CENPJQ9HC77 1338 aaPredicted RBP10.39□□□□□ -0.75
LRP6-206ENST00000543091 CANXP27824 592 aaKnown RBP10.39□□□□□ -0.75
LRP6-206ENST00000543091 FBXO31Q5XUX0 539 aaPredicted RBP10.39□□□□□ -0.75
LRP6-206ENST00000543091 MYO5CQ9NQX4 1742 aa10.39□□□□□ -0.75
LRP6-206ENST00000543091 NUTM2FA1L443 756 aa10.38□□□□□ -0.75
LRP6-206ENST00000543091 ST20-MTHFSA0A0A6YYL1 179 aa10.38□□□□□ -0.75
LRP6-206ENST00000543091 ATP7AQ04656 1500 aa10.37□□□□□ -0.75
LRP6-206ENST00000543091 IDI1Q13907 227 aa10.37□□□□□ -0.75
LRP6-206ENST00000543091 NPM2Q86SE8 214 aaKnown RBP10.37□□□□□ -0.75
LRP6-206ENST00000543091 SOX12O15370 315 aa10.37□□□□□ -0.75
LRP6-206ENST00000543091 TNNT2P45379 298 aaPredicted RBP10.37□□□□□ -0.75
LRP6-206ENST00000543091 ZFYVE16Q7Z3T8 1539 aa10.36□□□□□ -0.75
LRP6-206ENST00000543091 CFAP70Q5T0N1 1121 aa10.36□□□□□ -0.75
LRP6-206ENST00000543091 PNNQ9H307 717 aaKnown RBP10.36□□□□□ -0.75
LRP6-206ENST00000543091 SHROOM2Q13796 1616 aa10.36□□□□□ -0.75
LRP6-206ENST00000543091 MAGI2Q86UL8 1455 aa10.36□□□□□ -0.75
LRP6-206ENST00000543091 CC2D1BQ5T0F9 858 aaKnown RBP10.36□□□□□ -0.75
LRP6-206ENST00000543091 USP47Q96K76 1375 aa10.36□□□□□ -0.75
LRP6-206ENST00000543091 SLC26A8Q96RN1 970 aa10.35□□□□□ -0.75
LRP6-206ENST00000543091 MAGI3Q5TCQ9 1506 aa10.35□□□□□ -0.75
LRP6-206ENST00000543091 TMEM132EQ6IEE7 984 aa10.35□□□□□ -0.75
LRP6-206ENST00000543091 MAPK8IP3Q9UPT6 1336 aa10.35□□□□□ -0.75
LRP6-206ENST00000543091 HNRNPUQ00839 825 aaKnown RBP eCLIP10.34□□□□□ -0.75
LRP6-206ENST00000543091 KTN1Q86UP2 1357 aaKnown RBP10.33□□□□□ -0.76
LRP6-206ENST00000543091 ZBTB47Q9UFB7 747 aaPredicted RBP10.33□□□□□ -0.76
LRP6-206ENST00000543091 TSPOAP1O95153 1857 aa10.33□□□□□ -0.76
LRP6-206ENST00000543091 FAM135AQ9P2D6 1515 aa10.33□□□□□ -0.76
LRP6-206ENST00000543091 DNMT1P26358 1616 aaKnown RBP10.33□□□□□ -0.76
LRP6-206ENST00000543091 CSB-PGBD3P0DP91 1061 aa10.33□□□□□ -0.76
LRP6-206ENST00000543091 PSME1Q06323 249 aa10.33□□□□□ -0.76
LRP6-206ENST00000543091 ZMYM3Q14202 1370 aa10.32□□□□□ -0.76
LRP6-206ENST00000543091 ADCY10Q96PN6 1610 aa10.32□□□□□ -0.76
LRP6-206ENST00000543091 U2SURPO15042 1029 aaKnown RBP10.32□□□□□ -0.76
LRP6-206ENST00000543091 PTPRKQ15262 1439 aa10.32□□□□□ -0.76
LRP6-206ENST00000543091 ARAP3Q8WWN8 1544 aa10.31□□□□□ -0.76
LRP6-206ENST00000543091 ARHGEF5Q12774 1597 aa10.31□□□□□ -0.76
LRP6-206ENST00000543091 SALL2Q9Y467 1007 aaPredicted RBP10.31□□□□□ -0.76
LRP6-206ENST00000543091 TTC37Q6PGP7 1564 aa10.31□□□□□ -0.76
LRP6-206ENST00000543091 ADGRL2O95490 1459 aa10.31□□□□□ -0.76
LRP6-206ENST00000543091 MLH3Q9UHC1 1453 aa10.3□□□□□ -0.76
LRP6-206ENST00000543091 PRAM1Q96QH2 718 aa10.3□□□□□ -0.76
LRP6-206ENST00000543091 RALBP1Q15311 655 aa10.29□□□□□ -0.76
LRP6-206ENST00000543091 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.29□□□□□ -0.762e-6■■■■□ 22.4
LRP6-206ENST00000543091 PREX2Q70Z35 1606 aa10.29□□□□□ -0.76
LRP6-206ENST00000543091 COG3Q96JB2 828 aa10.29□□□□□ -0.76
LRP6-206ENST00000543091 CCDC9Q9Y3X0 531 aaKnown RBP10.29□□□□□ -0.76
LRP6-206ENST00000543091 CGNL1Q0VF96 1302 aa10.29□□□□□ -0.76
LRP6-206ENST00000543091 ABCC1P33527 1531 aa10.28□□□□□ -0.76
LRP6-206ENST00000543091 AMPHP49418 695 aa10.28□□□□□ -0.76
LRP6-206ENST00000543091 GPRASP1Q5JY77 1395 aa10.28□□□□□ -0.76
LRP6-206ENST00000543091 YEATS2Q9ULM3 1422 aa10.28□□□□□ -0.76
LRP6-206ENST00000543091 KDM6BO15054 1643 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms