RNA–Protein interactions for RNA: ENST00000542032.1

LEMD3-204, Transcript of LEM domain containing 3, humanhuman

TSL 3

Gene LEMD3, Length 645 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD3-204ENST00000542032 BCL2L12Q9HB09 334 aa10.05□□□□□ -0.8
LEMD3-204ENST00000542032 BCAMP50895 628 aa10.03□□□□□ -0.8
LEMD3-204ENST00000542032 CAMK2BQ13554 666 aa10.03□□□□□ -0.8
LEMD3-204ENST00000542032 PLCB2Q00722 1185 aa10.02□□□□□ -0.81
LEMD3-204ENST00000542032 ANKK1Q8NFD2 765 aa10.02□□□□□ -0.81
LEMD3-204ENST00000542032 TBC1D12O60347 775 aa10.01□□□□□ -0.81
LEMD3-204ENST00000542032 PTPREP23469 700 aa10.01□□□□□ -0.81
LEMD3-204ENST00000542032 PRKD2Q9BZL6 878 aa10.01□□□□□ -0.81
LEMD3-204ENST00000542032 TSHZ2Q9NRE2 1034 aa10.01□□□□□ -0.81
LEMD3-204ENST00000542032 EMILIN3Q9NT22 766 aa10.01□□□□□ -0.81
LEMD3-204ENST00000542032 LOC100996750A0A140TA64 210 aa10□□□□□ -0.81
LEMD3-204ENST00000542032 KRTAP4-6Q9BYQ5 205 aa10□□□□□ -0.81
LEMD3-204ENST00000542032 UPF1Q92900 1129 aaKnown RBP eCLIP9.98□□□□□ -0.81
LEMD3-204ENST00000542032 ANO8Q9HCE9 1232 aaPredicted RBP9.96□□□□□ -0.82
LEMD3-204ENST00000542032 NYAP1Q6ZVC0 841 aa9.95□□□□□ -0.82
LEMD3-204ENST00000542032 WBP1LQ9NX94 342 aa9.95□□□□□ -0.82
LEMD3-204ENST00000542032 SOWAHBA6NEL2 793 aa9.93□□□□□ -0.82
LEMD3-204ENST00000542032 PDZRN3Q9UPQ7 1066 aa9.93□□□□□ -0.82
LEMD3-204ENST00000542032 ARIH1Q9Y4X5 557 aaPredicted RBP9.91□□□□□ -0.82
LEMD3-204ENST00000542032 EVI5O60447 810 aa9.9□□□□□ -0.82
LEMD3-204ENST00000542032 MAP3K9P80192 1104 aa9.9□□□□□ -0.82
LEMD3-204ENST00000542032 E2F4Q16254 413 aa9.9□□□□□ -0.82
LEMD3-204ENST00000542032 FOSBP53539 338 aa9.89□□□□□ -0.83
LEMD3-204ENST00000542032 WDR70Q9NW82 654 aa9.88□□□□□ -0.83
LEMD3-204ENST00000542032 POTECB2RU33 542 aa9.87□□□□□ -0.83
LEMD3-204ENST00000542032 DPYSL4O14531 572 aa9.87□□□□□ -0.83
LEMD3-204ENST00000542032 TREML4Q6UXN2 200 aa9.87□□□□□ -0.83
LEMD3-204ENST00000542032 V9GY48 417 aaPredicted RBP9.87□□□□□ -0.83
LEMD3-204ENST00000542032 RABGEF1Q9UJ41 708 aa9.86□□□□□ -0.83
LEMD3-204ENST00000542032 PROX2Q3B8N5 592 aa9.85□□□□□ -0.83
LEMD3-204ENST00000542032 LCE2AQ5TA79 106 aaPredicted RBP9.85□□□□□ -0.83
LEMD3-204ENST00000542032 PDIA6Q15084 440 aa9.84□□□□□ -0.83
LEMD3-204ENST00000542032 JPH4Q96JJ6 628 aa9.84□□□□□ -0.83
LEMD3-204ENST00000542032 ADAM33Q9BZ11 813 aa9.84□□□□□ -0.83
LEMD3-204ENST00000542032 ZFRQ96KR1 1074 aaKnown RBP9.83□□□□□ -0.84
LEMD3-204ENST00000542032 SPDYE16A6NNV3 312 aaPredicted RBP9.8□□□□□ -0.84
LEMD3-204ENST00000542032 PPP1R18Q6NYC8 613 aa9.8□□□□□ -0.84
LEMD3-204ENST00000542032 LAPTM4BQ86VI4 370 aa9.8□□□□□ -0.84
LEMD3-204ENST00000542032 ZDHHC16Q969W1 377 aa9.8□□□□□ -0.84
LEMD3-204ENST00000542032 PCDHGA10Q9Y5H3 936 aa9.8□□□□□ -0.84
LEMD3-204ENST00000542032 STK17AQ9UEE5 414 aa9.79□□□□□ -0.84
LEMD3-204ENST00000542032 PHF14O94880 888 aa9.78□□□□□ -0.84
LEMD3-204ENST00000542032 HAP1P54257 671 aaPredicted RBP9.78□□□□□ -0.84
LEMD3-204ENST00000542032 KCNV2Q8TDN2 545 aa9.78□□□□□ -0.84
LEMD3-204ENST00000542032 HPS5Q9UPZ3 1129 aa9.77□□□□□ -0.85
LEMD3-204ENST00000542032 PPP1R3GB7ZBB8 358 aa9.76□□□□□ -0.85
LEMD3-204ENST00000542032 ARHGEF1Q92888 912 aaKnown RBP9.76□□□□□ -0.85
LEMD3-204ENST00000542032 TSR3Q9UJK0 312 aaKnown RBP9.76□□□□□ -0.85
LEMD3-204ENST00000542032 KDM2AQ9Y2K7 1162 aa9.75□□□□□ -0.85
LEMD3-204ENST00000542032 MYT1Q01538 1121 aa9.74□□□□□ -0.85
LEMD3-204ENST00000542032 TYW1BQ6NUM6 668 aa9.74□□□□□ -0.85
LEMD3-204ENST00000542032 SEPT9Q9UHD8 586 aaPredicted RBP9.74□□□□□ -0.85
LEMD3-204ENST00000542032 FBXW7Q969H0 707 aa9.73□□□□□ -0.85
LEMD3-204ENST00000542032 EPAS1Q99814 870 aa9.73□□□□□ -0.85
LEMD3-204ENST00000542032 COL9A1P20849 921 aa9.72□□□□□ -0.85
LEMD3-204ENST00000542032 PKDCCQ504Y2 493 aa9.72□□□□□ -0.85
LEMD3-204ENST00000542032 TJAP1Q5JTD0 557 aa9.72□□□□□ -0.85
LEMD3-204ENST00000542032 KIAA1468Q9P260 1216 aa9.72□□□□□ -0.85
LEMD3-204ENST00000542032 P3H3Q8IVL6 736 aa9.71□□□□□ -0.86
LEMD3-204ENST00000542032 VSIG10Q8N0Z9 540 aa9.71□□□□□ -0.86
LEMD3-204ENST00000542032 DDX12PQ92771 950 aa9.71□□□□□ -0.86
LEMD3-204ENST00000542032 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.71□□□□□ -0.86
LEMD3-204ENST00000542032 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.71□□□□□ -0.86
LEMD3-204ENST00000542032 LRCH3Q96II8 777 aa9.68□□□□□ -0.86
LEMD3-204ENST00000542032 EN1Q05925 392 aaPredicted RBP9.67□□□□□ -0.86
LEMD3-204ENST00000542032 PRIM1P49642 420 aaKnown RBP9.66□□□□□ -0.86
LEMD3-204ENST00000542032 WFS1O76024 890 aa9.65□□□□□ -0.86
LEMD3-204ENST00000542032 OSBPP22059 807 aa9.65□□□□□ -0.86
LEMD3-204ENST00000542032 NBR1Q14596 966 aa9.65□□□□□ -0.86
LEMD3-204ENST00000542032 C6orf132Q5T0Z8 1188 aa9.65□□□□□ -0.86
LEMD3-204ENST00000542032 TRIM67Q6ZTA4 783 aa9.65□□□□□ -0.86
LEMD3-204ENST00000542032 DGAT1O75907 488 aa9.64□□□□□ -0.87
LEMD3-204ENST00000542032 MTRQ99707 1265 aa9.64□□□□□ -0.87
LEMD3-204ENST00000542032 INSM1Q01101 510 aaPredicted RBP9.63□□□□□ -0.87
LEMD3-204ENST00000542032 GRXCR2A6NFK2 248 aa9.62□□□□□ -0.87
LEMD3-204ENST00000542032 FAM98CQ17RN3 349 aaKnown RBP9.62□□□□□ -0.87
LEMD3-204ENST00000542032 IL21Q9HBE4 155 aa9.62□□□□□ -0.87
LEMD3-204ENST00000542032 MLLT3P42568 568 aaPredicted RBP9.61□□□□□ -0.87
LEMD3-204ENST00000542032 PPP4CP60510 307 aa9.61□□□□□ -0.87
LEMD3-204ENST00000542032 RBM33Q96EV2 1170 aaKnown RBP9.61□□□□□ -0.87
LEMD3-204ENST00000542032 TSR1Q2NL82 804 aaKnown RBP9.6□□□□□ -0.87
LEMD3-204ENST00000542032 ZNF516Q92618 1163 aa9.6□□□□□ -0.87
LEMD3-204ENST00000542032 MAP3K7O43318 606 aa9.59□□□□□ -0.87
LEMD3-204ENST00000542032 SEMA3EO15041 775 aa9.58□□□□□ -0.88
LEMD3-204ENST00000542032 ST8SIA5O15466 376 aa9.58□□□□□ -0.88
LEMD3-204ENST00000542032 WIPF1O43516 503 aa9.58□□□□□ -0.88
LEMD3-204ENST00000542032 ONECUT3O60422 494 aaPredicted RBP9.58□□□□□ -0.88
LEMD3-204ENST00000542032 SUZ12Q15022 739 aaKnown RBP9.56□□□□□ -0.88
LEMD3-204ENST00000542032 NKX2-3Q8TAU0 364 aa9.56□□□□□ -0.88
LEMD3-204ENST00000542032 TESPA1A2RU30 521 aaPredicted RBP9.55□□□□□ -0.88
LEMD3-204ENST00000542032 FAM187AA6NFU0 413 aa9.55□□□□□ -0.88
LEMD3-204ENST00000542032 CERKQ8TCT0 537 aa9.54□□□□□ -0.88
LEMD3-204ENST00000542032 CDHR5Q9HBB8 845 aa9.54□□□□□ -0.88
LEMD3-204ENST00000542032 NPDC1Q9NQX5 325 aaPredicted RBP9.54□□□□□ -0.88
LEMD3-204ENST00000542032 TRIM6-TRIM34B2RNG4 842 aa9.53□□□□□ -0.88
LEMD3-204ENST00000542032 NFX1Q12986 1120 aaKnown RBP9.53□□□□□ -0.88
LEMD3-204ENST00000542032 GGCXP38435 758 aa9.52□□□□□ -0.89
LEMD3-204ENST00000542032 AAASQ9NRG9 546 aa9.52□□□□□ -0.89
LEMD3-204ENST00000542032 RBM27Q9P2N5 1060 aaKnown RBP9.51□□□□□ -0.89
LEMD3-204ENST00000542032 TSKSQ9UJT2 592 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms