RNA–Protein interactions for RNA: ENST00000542001.5

VARS2-212, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VARS2, Length 4,064 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-212ENST00000542001 MAPKBP1O60336 1514 aa20.78■□□□□ 0.92
VARS2-212ENST00000542001 TMEM132EQ6IEE7 984 aa20.77■□□□□ 0.91
VARS2-212ENST00000542001 TCERG1O14776 1098 aaKnown RBP20.76■□□□□ 0.91
VARS2-212ENST00000542001 PAK3O75914 559 aaPredicted RBP20.75■□□□□ 0.91
VARS2-212ENST00000542001 PNISRQ8TF01 805 aaKnown RBP20.74■□□□□ 0.91
VARS2-212ENST00000542001 COG6Q9Y2V7 657 aa20.74■□□□□ 0.91
VARS2-212ENST00000542001 WASHC2CQ9Y4E1 1318 aa20.74■□□□□ 0.91
VARS2-212ENST00000542001 ELL2O00472 640 aaPredicted RBP20.74■□□□□ 0.91
VARS2-212ENST00000542001 GRIN2BQ13224 1484 aa20.74■□□□□ 0.91
VARS2-212ENST00000542001 BECN1Q14457 450 aa20.74■□□□□ 0.91
VARS2-212ENST00000542001 RSPH4AQ5TD94 716 aa20.73■□□□□ 0.91
VARS2-212ENST00000542001 CFAP70Q5T0N1 1121 aa20.73■□□□□ 0.91
VARS2-212ENST00000542001 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.73■□□□□ 0.91
VARS2-212ENST00000542001 ABCA10Q8WWZ4 1543 aa20.73■□□□□ 0.91
VARS2-212ENST00000542001 MYH16Q9H6N6 1097 aa20.71■□□□□ 0.91
VARS2-212ENST00000542001 EPRSP07814 1512 aaKnown RBP20.71■□□□□ 0.91
VARS2-212ENST00000542001 DNMBPQ6XZF7 1577 aa20.7■□□□□ 0.9
VARS2-212ENST00000542001 DAPK1P53355 1430 aa20.69■□□□□ 0.9
VARS2-212ENST00000542001 MSH5O43196 834 aa20.69■□□□□ 0.9
VARS2-212ENST00000542001 EFCAB5A4FU69 1503 aa20.69■□□□□ 0.9
VARS2-212ENST00000542001 LMOD2Q6P5Q4 547 aa20.68■□□□□ 0.9
VARS2-212ENST00000542001 PLB1Q6P1J6 1458 aa20.68■□□□□ 0.9
VARS2-212ENST00000542001 ITPRIPQ8IWB1 547 aa20.68■□□□□ 0.9
VARS2-212ENST00000542001 URB2Q14146 1524 aaKnown RBP20.68■□□□□ 0.9
VARS2-212ENST00000542001 PDE3BQ13370 1112 aa20.67■□□□□ 0.9
VARS2-212ENST00000542001 GZF1Q9H116 711 aaPredicted RBP20.67■□□□□ 0.9
VARS2-212ENST00000542001 BIVM-ERCC5R4GMW8 1640 aa20.66■□□□□ 0.9
VARS2-212ENST00000542001 ANKRD30BQ9BXX2 1392 aa20.66■□□□□ 0.9
VARS2-212ENST00000542001 SNAPC4Q5SXM2 1469 aa20.66■□□□□ 0.9
VARS2-212ENST00000542001 NCLP19338 710 aaKnown RBP20.65■□□□□ 0.9
VARS2-212ENST00000542001 MINK1Q8N4C8 1332 aaPredicted RBP20.64■□□□□ 0.9
VARS2-212ENST00000542001 CENPJQ9HC77 1338 aaPredicted RBP20.64■□□□□ 0.89
VARS2-212ENST00000542001 SMC4Q9NTJ3 1288 aa20.64■□□□□ 0.89
VARS2-212ENST00000542001 ZNF608Q9ULD9 1512 aaPredicted RBP20.64■□□□□ 0.89
VARS2-212ENST00000542001 FANCIQ9NVI1 1328 aa20.64■□□□□ 0.89
VARS2-212ENST00000542001 EHBP1L1Q8N3D4 1523 aa20.63■□□□□ 0.89
VARS2-212ENST00000542001 ABCC5O15440 1437 aa20.62■□□□□ 0.89
VARS2-212ENST00000542001 KIAA1107Q9UPP5 1409 aa20.62■□□□□ 0.89
VARS2-212ENST00000542001 PANK1Q8TE04 598 aa20.61■□□□□ 0.89
VARS2-212ENST00000542001 TROQ12816 1431 aaPredicted RBP20.61■□□□□ 0.89
VARS2-212ENST00000542001 C9orf84Q5VXU9 1444 aa20.61■□□□□ 0.89
VARS2-212ENST00000542001 MFAP1P55081 439 aaKnown RBP20.6■□□□□ 0.89
VARS2-212ENST00000542001 MIA2Q96PC5 1412 aa20.6■□□□□ 0.89
VARS2-212ENST00000542001 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.58■□□□□ 0.89
VARS2-212ENST00000542001 FOXD4L1Q9NU39 408 aa20.58■□□□□ 0.89
VARS2-212ENST00000542001 CYB5RLQ6IPT4 315 aa20.58■□□□□ 0.88
VARS2-212ENST00000542001 SLC12A5Q9H2X9 1139 aa20.57■□□□□ 0.88
VARS2-212ENST00000542001 ARHGEF11O15085 1522 aa20.56■□□□□ 0.88
VARS2-212ENST00000542001 BCAR3O75815 825 aa20.56■□□□□ 0.88
VARS2-212ENST00000542001 GGNBP2Q9H3C7 697 aa20.56■□□□□ 0.88
VARS2-212ENST00000542001 PPP2R1AP30153 589 aa20.56■□□□□ 0.88
VARS2-212ENST00000542001 PTPN23Q9H3S7 1636 aa20.55■□□□□ 0.88
VARS2-212ENST00000542001 SUPT6HQ7KZ85 1726 aaKnown RBP20.55■□□□□ 0.88
VARS2-212ENST00000542001 CABP2Q9NPB3 220 aa20.55■□□□□ 0.88
VARS2-212ENST00000542001 C20orf194Q5TEA3 1177 aa20.54■□□□□ 0.88
VARS2-212ENST00000542001 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.53■□□□□ 0.88
VARS2-212ENST00000542001 HDGFL2Q7Z4V5 671 aaPredicted RBP20.53■□□□□ 0.88
VARS2-212ENST00000542001 ANP32BQ92688 251 aaKnown RBP20.53■□□□□ 0.88
VARS2-212ENST00000542001 A0A0G2JS52 829 aa20.53■□□□□ 0.88
VARS2-212ENST00000542001 MRC2Q9UBG0 1479 aa20.52■□□□□ 0.88
VARS2-212ENST00000542001 HSP90AB1P08238 724 aaKnown RBP20.51■□□□□ 0.87
VARS2-212ENST00000542001 EIF3AQ14152 1382 aaKnown RBP20.51■□□□□ 0.87
VARS2-212ENST00000542001 BRD4O60885 1362 aaPredicted RBP20.5■□□□□ 0.87
VARS2-212ENST00000542001 MTHFSP49914 203 aa20.5■□□□□ 0.87
VARS2-212ENST00000542001 THOC2Q8NI27 1593 aaKnown RBP20.5■□□□□ 0.87
VARS2-212ENST00000542001 ARHGAP5Q13017 1502 aa20.49■□□□□ 0.87
VARS2-212ENST00000542001 RWDD1Q9H446 243 aaPredicted RBP20.49■□□□□ 0.87
VARS2-212ENST00000542001 MAP3K1Q13233 1512 aa20.49■□□□□ 0.87
VARS2-212ENST00000542001 NCOA1Q15788 1441 aa20.48■□□□□ 0.87
VARS2-212ENST00000542001 CENPQQ7L2Z9 268 aaPredicted RBP20.48■□□□□ 0.87
VARS2-212ENST00000542001 IQGAP2Q13576 1575 aa20.47■□□□□ 0.87
VARS2-212ENST00000542001 E9PSI1 815 aa20.47■□□□□ 0.87
VARS2-212ENST00000542001 FAM161AQ3B820 660 aa20.47■□□□□ 0.87
VARS2-212ENST00000542001 KIAA0586Q9BVV6 1533 aa20.46■□□□□ 0.87
VARS2-212ENST00000542001 HMOX1P09601 288 aa20.46■□□□□ 0.87
VARS2-212ENST00000542001 HECW1Q76N89 1606 aa20.45■□□□□ 0.86
VARS2-212ENST00000542001 TAOK2Q9UL54 1235 aa20.45■□□□□ 0.86
VARS2-212ENST00000542001 LTV1Q96GA3 475 aaPredicted RBP20.45■□□□□ 0.86
VARS2-212ENST00000542001 TCP11L2Q8N4U5 519 aa20.45■□□□□ 0.86
VARS2-212ENST00000542001 TERF2IPQ9NYB0 399 aa20.44■□□□□ 0.86
VARS2-212ENST00000542001 SLC4A10Q6U841 1118 aa20.43■□□□□ 0.86
VARS2-212ENST00000542001 SCAPERQ9BY12 1400 aa20.43■□□□□ 0.86
VARS2-212ENST00000542001 CAMSAP2Q08AD1 1489 aa20.42■□□□□ 0.86
VARS2-212ENST00000542001 HSCBQ8IWL3 235 aa20.42■□□□□ 0.86
VARS2-212ENST00000542001 IFT140Q96RY7 1462 aa20.42■□□□□ 0.86
VARS2-212ENST00000542001 RAPGEF3O95398 923 aa20.42■□□□□ 0.86
VARS2-212ENST00000542001 TSR2Q969E8 191 aaKnown RBP20.42■□□□□ 0.86
VARS2-212ENST00000542001 SYNJ2O15056 1496 aa20.42■□□□□ 0.86
VARS2-212ENST00000542001 CGNL1Q0VF96 1302 aa20.41■□□□□ 0.86
VARS2-212ENST00000542001 RPRD2Q5VT52 1461 aaKnown RBP20.4■□□□□ 0.86
VARS2-212ENST00000542001 MS4A1P11836 297 aa20.4■□□□□ 0.86
VARS2-212ENST00000542001 RIPK4P57078 832 aa20.39■□□□□ 0.85
VARS2-212ENST00000542001 TRIM44Q96DX7 344 aaPredicted RBP20.39■□□□□ 0.85
VARS2-212ENST00000542001 ROCK1Q13464 1354 aa20.39■□□□□ 0.85
VARS2-212ENST00000542001 VGFO15240 615 aaPredicted RBP20.38■□□□□ 0.85
VARS2-212ENST00000542001 IPO8O15397 1037 aaKnown RBP20.38■□□□□ 0.85
VARS2-212ENST00000542001 PMFBP1Q8TBY8 1022 aa20.38■□□□□ 0.85
VARS2-212ENST00000542001 NOL8Q76FK4 1167 aaKnown RBP20.37■□□□□ 0.85
VARS2-212ENST00000542001 EVC2Q86UK5 1308 aa20.37■□□□□ 0.85
VARS2-212ENST00000542001 SMG6Q86US8 1419 aaKnown RBP20.37■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms