RNA–Protein interactions for RNA: ENST00000541427.1

KNTC1-211, Transcript of kinetochore associated 1, humanhuman

TSL 2

Gene KNTC1, Length 641 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNTC1-211ENST00000541427 PCDHGA10Q9Y5H3 936 aa10.56□□□□□ -0.72
KNTC1-211ENST00000541427 Q6ZNB5 142 aa10.54□□□□□ -0.72
KNTC1-211ENST00000541427 SOWAHBA6NEL2 793 aa10.53□□□□□ -0.72
KNTC1-211ENST00000541427 LAPTM4BQ86VI4 370 aa10.53□□□□□ -0.72
KNTC1-211ENST00000541427 EMILIN3Q9NT22 766 aa10.53□□□□□ -0.72
KNTC1-211ENST00000541427 TYW1BQ6NUM6 668 aa10.51□□□□□ -0.73
KNTC1-211ENST00000541427 NYAP1Q6ZVC0 841 aa10.51□□□□□ -0.73
KNTC1-211ENST00000541427 FBXW7Q969H0 707 aa10.51□□□□□ -0.73
KNTC1-211ENST00000541427 ZFRQ96KR1 1074 aaKnown RBP10.51□□□□□ -0.73
KNTC1-211ENST00000541427 KIAA1468Q9P260 1216 aa10.51□□□□□ -0.73
KNTC1-211ENST00000541427 MFSD10Q14728 455 aa10.5□□□□□ -0.73
KNTC1-211ENST00000541427 WBP1LQ9NX94 342 aa10.5□□□□□ -0.73
KNTC1-211ENST00000541427 GTPBP6O43824 516 aaPredicted RBP10.49□□□□□ -0.73
KNTC1-211ENST00000541427 KCNC4Q03721 635 aa10.49□□□□□ -0.73
KNTC1-211ENST00000541427 BBXQ8WY36 941 aaPredicted RBP10.49□□□□□ -0.73
KNTC1-211ENST00000541427 PHF14O94880 888 aa10.48□□□□□ -0.73
KNTC1-211ENST00000541427 SEPT9Q9UHD8 586 aaPredicted RBP10.46□□□□□ -0.73
KNTC1-211ENST00000541427 ONECUT3O60422 494 aaPredicted RBP10.45□□□□□ -0.74
KNTC1-211ENST00000541427 C6orf132Q5T0Z8 1188 aa10.43□□□□□ -0.74
KNTC1-211ENST00000541427 TRIM6-TRIM34B2RNG4 842 aa10.4□□□□□ -0.74
KNTC1-211ENST00000541427 FAM98CQ17RN3 349 aaKnown RBP10.4□□□□□ -0.74
KNTC1-211ENST00000541427 EPAS1Q99814 870 aa10.4□□□□□ -0.74
KNTC1-211ENST00000541427 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.4□□□□□ -0.74
KNTC1-211ENST00000541427 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.4□□□□□ -0.74
KNTC1-211ENST00000541427 TSR3Q9UJK0 312 aaKnown RBP10.4□□□□□ -0.74
KNTC1-211ENST00000541427 HPS5Q9UPZ3 1129 aa10.4□□□□□ -0.74
KNTC1-211ENST00000541427 LAPTM4AQ15012 233 aa10.39□□□□□ -0.75
KNTC1-211ENST00000541427 LRCH3Q96II8 777 aa10.39□□□□□ -0.75
KNTC1-211ENST00000541427 RBM33Q96EV2 1170 aaKnown RBP10.37□□□□□ -0.75
KNTC1-211ENST00000541427 PLCB2Q00722 1185 aa10.36□□□□□ -0.75
KNTC1-211ENST00000541427 PAXIP1Q6ZW49 1069 aaPredicted RBP10.36□□□□□ -0.75
KNTC1-211ENST00000541427 CADPS2Q86UW7 1296 aa10.36□□□□□ -0.75
KNTC1-211ENST00000541427 LCE2BO14633 110 aa10.35□□□□□ -0.75
KNTC1-211ENST00000541427 GFRA3O60609 400 aa10.35□□□□□ -0.75
KNTC1-211ENST00000541427 DPYSL4O14531 572 aa10.34□□□□□ -0.75
KNTC1-211ENST00000541427 SPRYD3Q8NCJ5 442 aa10.34□□□□□ -0.75
KNTC1-211ENST00000541427 CFAP44Q96MT7 982 aa10.34□□□□□ -0.75
KNTC1-211ENST00000541427 TRAF7Q6Q0C0 670 aa10.33□□□□□ -0.76
KNTC1-211ENST00000541427 CAMK2BQ13554 666 aa10.32□□□□□ -0.76
KNTC1-211ENST00000541427 DDX12PQ92771 950 aa10.31□□□□□ -0.76
KNTC1-211ENST00000541427 PPP4CP60510 307 aa10.3□□□□□ -0.76
KNTC1-211ENST00000541427 PACS2Q86VP3 889 aa10.3□□□□□ -0.76
KNTC1-211ENST00000541427 TSKSQ9UJT2 592 aa10.29□□□□□ -0.76
KNTC1-211ENST00000541427 TJAP1Q5JTD0 557 aa10.28□□□□□ -0.76
KNTC1-211ENST00000541427 PRKD2Q9BZL6 878 aa10.28□□□□□ -0.76
KNTC1-211ENST00000541427 TSR1Q2NL82 804 aaKnown RBP10.26□□□□□ -0.77
KNTC1-211ENST00000541427 NRG2O14511 850 aaPredicted RBP10.25□□□□□ -0.77
KNTC1-211ENST00000541427 MAP3K7O43318 606 aa10.25□□□□□ -0.77
KNTC1-211ENST00000541427 EN1Q05925 392 aaPredicted RBP10.25□□□□□ -0.77
KNTC1-211ENST00000541427 NBR1Q14596 966 aa10.25□□□□□ -0.77
KNTC1-211ENST00000541427 SAMD7Q7Z3H4 446 aa10.24□□□□□ -0.77
KNTC1-211ENST00000541427 SMAPO00193 183 aa10.23□□□□□ -0.77
KNTC1-211ENST00000541427 PPP1R18Q6NYC8 613 aa10.23□□□□□ -0.77
KNTC1-211ENST00000541427 MTRQ99707 1265 aa10.22□□□□□ -0.77
KNTC1-211ENST00000541427 CDCA7LQ96GN5 454 aa10.21□□□□□ -0.77
KNTC1-211ENST00000541427 IL21Q9HBE4 155 aa10.21□□□□□ -0.77
KNTC1-211ENST00000541427 V9GY48 417 aaPredicted RBP10.21□□□□□ -0.77
KNTC1-211ENST00000541427 TSHZ2Q9NRE2 1034 aa10.19□□□□□ -0.78
KNTC1-211ENST00000541427 HAP1P54257 671 aaPredicted RBP10.18□□□□□ -0.78
KNTC1-211ENST00000541427 PRSS12P56730 875 aa10.18□□□□□ -0.78
KNTC1-211ENST00000541427 FAM198AQ9UFP1 575 aa10.18□□□□□ -0.78
KNTC1-211ENST00000541427 PDIA6Q15084 440 aa10.17□□□□□ -0.78
KNTC1-211ENST00000541427 ZNF516Q92618 1163 aa10.17□□□□□ -0.78
KNTC1-211ENST00000541427 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.17□□□□□ -0.78
KNTC1-211ENST00000541427 C3orf80F5H4A9 247 aa10.16□□□□□ -0.78
KNTC1-211ENST00000541427 TATDN2Q93075 761 aa10.15□□□□□ -0.78
KNTC1-211ENST00000541427 PNMA3Q9UL41 463 aa10.15□□□□□ -0.78
KNTC1-211ENST00000541427 PDZRN3Q9UPQ7 1066 aa10.15□□□□□ -0.78
KNTC1-211ENST00000541427 NBPF26B4DH59 902 aa10.14□□□□□ -0.79
KNTC1-211ENST00000541427 ZNF787Q6DD87 383 aa10.14□□□□□ -0.79
KNTC1-211ENST00000541427 CERKQ8TCT0 537 aa10.14□□□□□ -0.79
KNTC1-211ENST00000541427 SLC24A1O60721 1099 aa10.13□□□□□ -0.79
KNTC1-211ENST00000541427 RNF40O75150 1001 aa10.13□□□□□ -0.79
KNTC1-211ENST00000541427 SPDYE16A6NNV3 312 aaPredicted RBP10.12□□□□□ -0.79
KNTC1-211ENST00000541427 APLP1P51693 650 aa10.12□□□□□ -0.79
KNTC1-211ENST00000541427 NKX2-3Q8TAU0 364 aa10.12□□□□□ -0.79
KNTC1-211ENST00000541427 PRIM1P49642 420 aaKnown RBP10.11□□□□□ -0.79
KNTC1-211ENST00000541427 HDGFP51858 240 aaKnown RBP10.11□□□□□ -0.79
KNTC1-211ENST00000541427 NUDT18Q6ZVK8 323 aa10.09□□□□□ -0.79
KNTC1-211ENST00000541427 GRXCR2A6NFK2 248 aa10.08□□□□□ -0.8
KNTC1-211ENST00000541427 GGCXP38435 758 aa10.08□□□□□ -0.8
KNTC1-211ENST00000541427 COPS2P61201 443 aa10.06□□□□□ -0.8
KNTC1-211ENST00000541427 ZNF775Q96BV0 537 aaPredicted RBP10.06□□□□□ -0.8
KNTC1-211ENST00000541427 CDHR5Q9HBB8 845 aa10.05□□□□□ -0.8
KNTC1-211ENST00000541427 KDM2AQ9Y2K7 1162 aa10.05□□□□□ -0.8
KNTC1-211ENST00000541427 NECTIN2Q92692 538 aa10.04□□□□□ -0.8
KNTC1-211ENST00000541427 TMUB1Q9BVT8 246 aa10.03□□□□□ -0.8
KNTC1-211ENST00000541427 RBM27Q9P2N5 1060 aaKnown RBP10.03□□□□□ -0.8
KNTC1-211ENST00000541427 SWT1Q5T5J6 900 aaKnown RBP10.02□□□□□ -0.81
KNTC1-211ENST00000541427 OSBPP22059 807 aa10.01□□□□□ -0.81
KNTC1-211ENST00000541427 SLF2Q8IX21 1173 aa10.01□□□□□ -0.81
KNTC1-211ENST00000541427 VSIG10Q8N0Z9 540 aa10.01□□□□□ -0.81
KNTC1-211ENST00000541427 E2F4Q16254 413 aa10□□□□□ -0.81
KNTC1-211ENST00000541427 ZPR1O75312 459 aa9.99□□□□□ -0.81
KNTC1-211ENST00000541427 TRIM67Q6ZTA4 783 aa9.99□□□□□ -0.81
KNTC1-211ENST00000541427 TTC13Q8NBP0 860 aa9.98□□□□□ -0.81
KNTC1-211ENST00000541427 SLC19A1P41440 591 aa9.97□□□□□ -0.81
KNTC1-211ENST00000541427 PADI6Q6TGC4 694 aa9.97□□□□□ -0.81
KNTC1-211ENST00000541427 ARIH1Q9Y4X5 557 aaPredicted RBP9.97□□□□□ -0.81
KNTC1-211ENST00000541427 RNF223E7ERA6 249 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms