RNA–Protein interactions for RNA: ENST00000540783.5

RAPGEF4-215, Transcript of Rap guanine nucleotide exchange factor 4, humanhuman

TSL 2 BASIC

Gene RAPGEF4, Length 3,974 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF4-215ENST00000540783 DEKP35659 375 aaKnown RBP7.74□□□□□ -1.17
RAPGEF4-215ENST00000540783 CNGB1Q14028 1251 aaPredicted RBP7.74□□□□□ -1.17
RAPGEF4-215ENST00000540783 ABCF1Q8NE71 845 aaKnown RBP eCLIP7.74□□□□□ -1.17
RAPGEF4-215ENST00000540783 ZFYVE16Q7Z3T8 1539 aa7.74□□□□□ -1.17
RAPGEF4-215ENST00000540783 CCDC184Q52MB2 194 aa7.74□□□□□ -1.17
RAPGEF4-215ENST00000540783 ABCA9Q8IUA7 1624 aa7.73□□□□□ -1.17
RAPGEF4-215ENST00000540783 THEMISQ8N1K5 641 aaPredicted RBP7.73□□□□□ -1.17
RAPGEF4-215ENST00000540783 MYO5CQ9NQX4 1742 aa7.73□□□□□ -1.17
RAPGEF4-215ENST00000540783 PKD2Q13563 968 aa7.73□□□□□ -1.17
RAPGEF4-215ENST00000540783 DMRT2Q9Y5R5 561 aa7.73□□□□□ -1.17
RAPGEF4-215ENST00000540783 TONSLQ96HA7 1378 aa7.73□□□□□ -1.17
RAPGEF4-215ENST00000540783 SENP3-EIF4A1A0A087X0R7 540 aa7.73□□□□□ -1.17
RAPGEF4-215ENST00000540783 FAM9BQ8IZU0 186 aa7.73□□□□□ -1.17
RAPGEF4-215ENST00000540783 SLC52A1Q9NWF4 448 aa7.72□□□□□ -1.17
RAPGEF4-215ENST00000540783 SYCP2Q9BX26 1530 aa7.72□□□□□ -1.17
RAPGEF4-215ENST00000540783 TRAPPC8Q9Y2L5 1435 aa7.72□□□□□ -1.17
RAPGEF4-215ENST00000540783 PTPN23Q9H3S7 1636 aa7.72□□□□□ -1.17
RAPGEF4-215ENST00000540783 SHANK2Q9UPX8 1470 aa7.72□□□□□ -1.17
RAPGEF4-215ENST00000540783 ABCC5O15440 1437 aa7.71□□□□□ -1.17
RAPGEF4-215ENST00000540783 MLH3Q9UHC1 1453 aa7.71□□□□□ -1.17
RAPGEF4-215ENST00000540783 C14orf37Q86TY3 774 aa7.71□□□□□ -1.18
RAPGEF4-215ENST00000540783 STAC3Q96MF2 364 aa7.7□□□□□ -1.18
RAPGEF4-215ENST00000540783 DUOX2Q9NRD8 1548 aa7.7□□□□□ -1.18
RAPGEF4-215ENST00000540783 PPP4R2Q9NY27 417 aa7.7□□□□□ -1.18
RAPGEF4-215ENST00000540783 TCOF1Q13428 1488 aaKnown RBP7.7□□□□□ -1.18
RAPGEF4-215ENST00000540783 MPHOSPH9Q99550 1183 aa7.7□□□□□ -1.18
RAPGEF4-215ENST00000540783 TIMELESSQ9UNS1 1208 aa7.7□□□□□ -1.18
RAPGEF4-215ENST00000540783 ERBINQ96RT1 1412 aa7.7□□□□□ -1.18
RAPGEF4-215ENST00000540783 PAK3O75914 559 aaPredicted RBP7.69□□□□□ -1.18
RAPGEF4-215ENST00000540783 SLC24A1O60721 1099 aa7.69□□□□□ -1.18
RAPGEF4-215ENST00000540783 TSPOAP1O95153 1857 aa7.69□□□□□ -1.18
RAPGEF4-215ENST00000540783 ATP7AQ04656 1500 aa7.69□□□□□ -1.18
RAPGEF4-215ENST00000540783 TTC37Q6PGP7 1564 aa7.68□□□□□ -1.18
RAPGEF4-215ENST00000540783 NCOA1Q15788 1441 aa7.68□□□□□ -1.18
RAPGEF4-215ENST00000540783 VGFO15240 615 aaPredicted RBP7.68□□□□□ -1.18
RAPGEF4-215ENST00000540783 PREX2Q70Z35 1606 aa7.68□□□□□ -1.18
RAPGEF4-215ENST00000540783 ABCC1P33527 1531 aa7.68□□□□□ -1.18
RAPGEF4-215ENST00000540783 HSPA5P11021 654 aaKnown RBP7.68□□□□□ -1.18
RAPGEF4-215ENST00000540783 ANKLE2Q86XL3 938 aa7.68□□□□□ -1.18
RAPGEF4-215ENST00000540783 RGL3Q3MIN7 710 aa7.68□□□□□ -1.18
RAPGEF4-215ENST00000540783 ARHGEF5Q12774 1597 aa7.68□□□□□ -1.18
RAPGEF4-215ENST00000540783 WASHC2AQ641Q2 1341 aa7.67□□□□□ -1.18
RAPGEF4-215ENST00000540783 HFM1A2PYH4 1435 aa7.67□□□□□ -1.18
RAPGEF4-215ENST00000540783 CCDC144AA2RUR9 1427 aa7.67□□□□□ -1.18
RAPGEF4-215ENST00000540783 MRS2Q9HD23 443 aa7.66□□□□□ -1.18
RAPGEF4-215ENST00000540783 NOP58Q9Y2X3 529 aaKnown RBP7.66□□□□□ -1.18
RAPGEF4-215ENST00000540783 TNRQ92752 1358 aa7.66□□□□□ -1.18
RAPGEF4-215ENST00000540783 HECW2Q9P2P5 1572 aa7.65□□□□□ -1.18
RAPGEF4-215ENST00000540783 KDM2AQ9Y2K7 1162 aa7.65□□□□□ -1.18
RAPGEF4-215ENST00000540783 C11orf95C9JLR9 678 aaPredicted RBP7.64□□□□□ -1.19
RAPGEF4-215ENST00000540783 UHRF1BP1Q6BDS2 1440 aa7.64□□□□□ -1.19
RAPGEF4-215ENST00000540783 YEATS2Q9ULM3 1422 aa7.64□□□□□ -1.19
RAPGEF4-215ENST00000540783 RPGRIP1LQ68CZ1 1315 aa7.64□□□□□ -1.19
RAPGEF4-215ENST00000540783 TXNDC2Q86VQ3 553 aa7.63□□□□□ -1.19
RAPGEF4-215ENST00000540783 ANO8Q9HCE9 1232 aaPredicted RBP7.63□□□□□ -1.19
RAPGEF4-215ENST00000540783 MBD5Q9P267 1494 aa7.63□□□□□ -1.19
RAPGEF4-215ENST00000540783 FOXD1Q16676 465 aa7.63□□□□□ -1.19
RAPGEF4-215ENST00000540783 POGKQ9P215 609 aa7.63□□□□□ -1.19
RAPGEF4-215ENST00000540783 MAP3K4Q9Y6R4 1608 aa7.63□□□□□ -1.19
RAPGEF4-215ENST00000540783 ZMYM3Q14202 1370 aa7.63□□□□□ -1.19
RAPGEF4-215ENST00000540783 SAMD9LQ8IVG5 1584 aa7.63□□□□□ -1.19
RAPGEF4-215ENST00000540783 POLR3GLQ9BT43 218 aa7.63□□□□□ -1.19
RAPGEF4-215ENST00000540783 ADGRL2O95490 1459 aa7.63□□□□□ -1.19
RAPGEF4-215ENST00000540783 PHF23Q9BUL5 403 aaPredicted RBP7.62□□□□□ -1.19
RAPGEF4-215ENST00000540783 EIF4G2P78344 907 aaKnown RBP eCLIP7.62□□□□□ -1.19
RAPGEF4-215ENST00000540783 RTN4Q9NQC3 1192 aaKnown RBP7.62□□□□□ -1.19
RAPGEF4-215ENST00000540783 FAM135AQ9P2D6 1515 aa7.62□□□□□ -1.19
RAPGEF4-215ENST00000540783 PRKRIP1Q9H875 184 aaPredicted RBP7.61□□□□□ -1.19
RAPGEF4-215ENST00000540783 DNMT1P26358 1616 aaKnown RBP7.61□□□□□ -1.19
RAPGEF4-215ENST00000540783 CDCA8Q53HL2 280 aa7.61□□□□□ -1.19
RAPGEF4-215ENST00000540783 NAIPQ13075 1403 aa7.61□□□□□ -1.19
RAPGEF4-215ENST00000540783 PTPRKQ15262 1439 aa7.61□□□□□ -1.19
RAPGEF4-215ENST00000540783 CEBPAP49715 358 aaPredicted RBP7.61□□□□□ -1.19
RAPGEF4-215ENST00000540783 ERICH6BQ5W0A0 696 aa7.61□□□□□ -1.19
RAPGEF4-215ENST00000540783 NPM2Q86SE8 214 aaKnown RBP7.6□□□□□ -1.19
RAPGEF4-215ENST00000540783 DCAF11Q8TEB1 546 aa7.6□□□□□ -1.19
RAPGEF4-215ENST00000540783 CCDC136Q96JN2 1154 aa7.6□□□□□ -1.19
RAPGEF4-215ENST00000540783 ZMYM4Q5VZL5 1548 aa7.59□□□□□ -1.19
RAPGEF4-215ENST00000540783 ARHGEF40Q8TER5 1519 aa7.59□□□□□ -1.19
RAPGEF4-215ENST00000540783 AGLP35573 1532 aa7.59□□□□□ -1.19
RAPGEF4-215ENST00000540783 RTL5Q5HYW3 569 aaPredicted RBP7.59□□□□□ -1.19
RAPGEF4-215ENST00000540783 L3MBTL2Q969R5 705 aa7.59□□□□□ -1.19
RAPGEF4-215ENST00000540783 ANKRD30BQ9BXX2 1392 aa7.59□□□□□ -1.19
RAPGEF4-215ENST00000540783 ANP32AP39687 249 aaKnown RBP7.58□□□□□ -1.2
RAPGEF4-215ENST00000540783 IL27Q8NEV9 243 aa7.58□□□□□ -1.2
RAPGEF4-215ENST00000540783 FBXO41Q8TF61 875 aa7.58□□□□□ -1.2
RAPGEF4-215ENST00000540783 ZBTB47Q9UFB7 747 aaPredicted RBP7.58□□□□□ -1.2
RAPGEF4-215ENST00000540783 MAST1Q9Y2H9 1570 aa7.58□□□□□ -1.2
RAPGEF4-215ENST00000540783 SALL2Q9Y467 1007 aaPredicted RBP7.58□□□□□ -1.2
RAPGEF4-215ENST00000540783 ZBED9Q6R2W3 1325 aa7.58□□□□□ -1.2
RAPGEF4-215ENST00000540783 CDC42BPAQ5VT25 1732 aa7.58□□□□□ -1.2
RAPGEF4-215ENST00000540783 IPO9Q96P70 1041 aaKnown RBP7.57□□□□□ -1.2
RAPGEF4-215ENST00000540783 EIF3AQ14152 1382 aaKnown RBP7.57□□□□□ -1.2
RAPGEF4-215ENST00000540783 FBXO31Q5XUX0 539 aaPredicted RBP7.57□□□□□ -1.2
RAPGEF4-215ENST00000540783 ARHGEF12Q9NZN5 1544 aa7.57□□□□□ -1.2
RAPGEF4-215ENST00000540783 LAS1LQ9Y4W2 734 aaKnown RBP7.56□□□□□ -1.2
RAPGEF4-215ENST00000540783 KDM5DQ9BY66 1539 aa7.56□□□□□ -1.2
RAPGEF4-215ENST00000540783 KDM5CP41229 1560 aa7.56□□□□□ -1.2
RAPGEF4-215ENST00000540783 RPRD2Q5VT52 1461 aaKnown RBP7.56□□□□□ -1.2
RAPGEF4-215ENST00000540783 NPATQ14207 1427 aa7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms