RNA–Protein interactions for RNA: ENST00000539735.5

COPS7A-210, Transcript of COP9 signalosome subunit 7A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COPS7A, Length 1,832 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-210ENST00000539735 KIF15Q9NS87 1388 aa26.25■■□□□ 1.79
COPS7A-210ENST00000539735 SIN3AQ96ST3 1273 aa26.23■■□□□ 1.79
COPS7A-210ENST00000539735 CROCC2H7BZ55 1655 aa26.23■■□□□ 1.79
COPS7A-210ENST00000539735 KIF3BO15066 747 aa26.23■■□□□ 1.79
COPS7A-210ENST00000539735 AGLP35573 1532 aa26.22■■□□□ 1.79
COPS7A-210ENST00000539735 GGT6Q6P531 493 aa26.22■■□□□ 1.79
COPS7A-210ENST00000539735 NCOA1Q15788 1441 aa26.22■■□□□ 1.79
COPS7A-210ENST00000539735 ADGBQ8N7X0 1667 aa26.21■■□□□ 1.79
COPS7A-210ENST00000539735 PLXNC1O60486 1568 aa26.2■■□□□ 1.78
COPS7A-210ENST00000539735 TRIM52Q96A61 297 aa26.18■■□□□ 1.78
COPS7A-210ENST00000539735 ESF1Q9H501 851 aaKnown RBP26.17■■□□□ 1.78
COPS7A-210ENST00000539735 BCORL1Q5H9F3 1711 aa26.17■■□□□ 1.78
COPS7A-210ENST00000539735 ADGRL2O95490 1459 aa26.17■■□□□ 1.78
COPS7A-210ENST00000539735 DUOX2Q9NRD8 1548 aa26.16■■□□□ 1.78
COPS7A-210ENST00000539735 AEBP2Q6ZN18 517 aaPredicted RBP26.14■■□□□ 1.78
COPS7A-210ENST00000539735 ADAMTSL3P82987 1691 aa26.11■■□□□ 1.77
COPS7A-210ENST00000539735 GTF3C3Q9Y5Q9 886 aa26.11■■□□□ 1.77
COPS7A-210ENST00000539735 ERBINQ96RT1 1412 aa26.1■■□□□ 1.77
COPS7A-210ENST00000539735 PLPPR3Q6T4P5 718 aa26.1■■□□□ 1.77
COPS7A-210ENST00000539735 YTHDC1Q96MU7 727 aaKnown RBP26.09■■□□□ 1.77
COPS7A-210ENST00000539735 MADDQ8WXG6 1647 aa26.09■■□□□ 1.77
COPS7A-210ENST00000539735 ANKRD50Q9ULJ7 1429 aa26.08■■□□□ 1.77
COPS7A-210ENST00000539735 PPP6R1Q9UPN7 881 aa26.07■■□□□ 1.76
COPS7A-210ENST00000539735 MPHOSPH9Q99550 1183 aa26.05■■□□□ 1.76
COPS7A-210ENST00000539735 GRWD1Q9BQ67 446 aaKnown RBP eCLIP26.05■■□□□ 1.76
COPS7A-210ENST00000539735 WASHC2CQ9Y4E1 1318 aa26.05■■□□□ 1.76
COPS7A-210ENST00000539735 PTPRMP28827 1452 aa26.04■■□□□ 1.76
COPS7A-210ENST00000539735 CEBPAP49715 358 aaPredicted RBP26.02■■□□□ 1.76
COPS7A-210ENST00000539735 CNTLNQ9NXG0 1405 aa26.01■■□□□ 1.75
COPS7A-210ENST00000539735 EIF2AK4Q9P2K8 1649 aaKnown RBP26■■□□□ 1.75
COPS7A-210ENST00000539735 RIMS1Q86UR5 1692 aaKnown RBP26■■□□□ 1.75
COPS7A-210ENST00000539735 FER1L4A9Z1Z3 1794 aa25.99■■□□□ 1.75
COPS7A-210ENST00000539735 PPP1R15AO75807 674 aaPredicted RBP25.99■■□□□ 1.75
COPS7A-210ENST00000539735 TONSLQ96HA7 1378 aa25.98■■□□□ 1.75
COPS7A-210ENST00000539735 ZMYM3Q14202 1370 aa25.96■■□□□ 1.75
COPS7A-210ENST00000539735 KANK1Q14678 1352 aa25.95■■□□□ 1.74
COPS7A-210ENST00000539735 RNF17Q9BXT8 1623 aaKnown RBP25.94■■□□□ 1.74
COPS7A-210ENST00000539735 FOXD1Q16676 465 aa25.93■■□□□ 1.74
COPS7A-210ENST00000539735 KDM5DQ9BY66 1539 aa25.93■■□□□ 1.74
COPS7A-210ENST00000539735 SLC4A1APQ9BWU0 796 aaKnown RBP25.93■■□□□ 1.74
COPS7A-210ENST00000539735 MROH1Q8NDA8 1641 aa25.9■■□□□ 1.74
COPS7A-210ENST00000539735 CLTCQ00610 1675 aaKnown RBP25.89■■□□□ 1.74
COPS7A-210ENST00000539735 PZPP20742 1482 aa25.89■■□□□ 1.73
COPS7A-210ENST00000539735 PRDM15P57071 1507 aaPredicted RBP25.89■■□□□ 1.73
COPS7A-210ENST00000539735 FAM135AQ9P2D6 1515 aa25.88■■□□□ 1.73
COPS7A-210ENST00000539735 ABCC3O15438 1527 aa25.87■■□□□ 1.73
COPS7A-210ENST00000539735 NUP155O75694 1391 aa25.86■■□□□ 1.73
COPS7A-210ENST00000539735 DEPDC5O75140 1603 aa25.86■■□□□ 1.73
COPS7A-210ENST00000539735 PELP1Q8IZL8 1130 aaKnown RBP25.86■■□□□ 1.73
COPS7A-210ENST00000539735 FBXO31Q5XUX0 539 aaPredicted RBP25.84■■□□□ 1.73
COPS7A-210ENST00000539735 ANKRD30BQ9BXX2 1392 aa25.84■■□□□ 1.73
COPS7A-210ENST00000539735 MROH2AA6NES4 1674 aa25.82■■□□□ 1.72
COPS7A-210ENST00000539735 C3P01024 1663 aa25.81■■□□□ 1.72
COPS7A-210ENST00000539735 ZC3H13Q5T200 1668 aaKnown RBP25.79■■□□□ 1.72
COPS7A-210ENST00000539735 VWDEQ8N2E2 1590 aa25.78■■□□□ 1.72
COPS7A-210ENST00000539735 NPATQ14207 1427 aa25.78■■□□□ 1.72
COPS7A-210ENST00000539735 UNC13BO14795 1591 aa25.78■■□□□ 1.72
COPS7A-210ENST00000539735 CEP152O94986 1710 aa25.76■■□□□ 1.71
COPS7A-210ENST00000539735 LMTK2Q8IWU2 1503 aa25.76■■□□□ 1.71
COPS7A-210ENST00000539735 PKD2Q13563 968 aa25.76■■□□□ 1.71
COPS7A-210ENST00000539735 RPRD2Q5VT52 1461 aaKnown RBP25.74■■□□□ 1.71
COPS7A-210ENST00000539735 ARHGAP31Q2M1Z3 1444 aa25.74■■□□□ 1.71
COPS7A-210ENST00000539735 CAMSAP1Q5T5Y3 1602 aa25.73■■□□□ 1.71
COPS7A-210ENST00000539735 TNRQ92752 1358 aa25.72■■□□□ 1.71
COPS7A-210ENST00000539735 DDX10Q13206 875 aaKnown RBP25.71■■□□□ 1.71
COPS7A-210ENST00000539735 UHRF1BP1Q6BDS2 1440 aa25.7■■□□□ 1.71
COPS7A-210ENST00000539735 L3MBTL2Q969R5 705 aa25.7■■□□□ 1.71
COPS7A-210ENST00000539735 EFCAB6Q5THR3 1501 aa25.69■■□□□ 1.7
COPS7A-210ENST00000539735 IQGAP3Q86VI3 1631 aa25.68■■□□□ 1.7
COPS7A-210ENST00000539735 ERVK-7P63135 1459 aa25.68■■□□□ 1.7
COPS7A-210ENST00000539735 HSPA2P54652 639 aa25.66■■□□□ 1.7
COPS7A-210ENST00000539735 LMTK3Q96Q04 1460 aa25.66■■□□□ 1.7
COPS7A-210ENST00000539735 SETD1BQ9UPS6 1966 aaKnown RBP25.65■■□□□ 1.7
COPS7A-210ENST00000539735 TET3O43151 1660 aa25.64■■□□□ 1.7
COPS7A-210ENST00000539735 HIRIP3Q9BW71 556 aaPredicted RBP25.63■■□□□ 1.69
COPS7A-210ENST00000539735 SPATA31D1Q6ZQQ2 1576 aa25.63■■□□□ 1.69
COPS7A-210ENST00000539735 PREX1Q8TCU6 1659 aa25.61■■□□□ 1.69
COPS7A-210ENST00000539735 CFAP65Q6ZU64 1925 aaKnown RBP25.59■■□□□ 1.69
COPS7A-210ENST00000539735 NOS1P29475 1434 aa25.59■■□□□ 1.69
COPS7A-210ENST00000539735 CCER2I3L3R5 266 aa25.58■■□□□ 1.68
COPS7A-210ENST00000539735 NLRP1Q9C000 1473 aa25.58■■□□□ 1.68
COPS7A-210ENST00000539735 IDI1Q13907 227 aa25.56■■□□□ 1.68
COPS7A-210ENST00000539735 SLC52A1Q9NWF4 448 aa25.56■■□□□ 1.68
COPS7A-210ENST00000539735 MYO3AQ8NEV4 1616 aa25.56■■□□□ 1.68
COPS7A-210ENST00000539735 E9PCH4 1651 aa25.55■■□□□ 1.68
COPS7A-210ENST00000539735 A2ML1A8K2U0 1454 aa25.55■■□□□ 1.68
COPS7A-210ENST00000539735 STAG3Q9UJ98 1225 aa25.55■■□□□ 1.68
COPS7A-210ENST00000539735 ANP32CO43423 234 aa25.54■■□□□ 1.68
COPS7A-210ENST00000539735 CEP170BQ9Y4F5 1589 aaPredicted RBP25.53■■□□□ 1.68
COPS7A-210ENST00000539735 NBPF8Q3BBV2 869 aa25.52■■□□□ 1.68
COPS7A-210ENST00000539735 THEMISQ8N1K5 641 aaPredicted RBP25.52■■□□□ 1.68
COPS7A-210ENST00000539735 SYNMO15061 1565 aa25.51■■□□□ 1.67
COPS7A-210ENST00000539735 UGGT1Q9NYU2 1555 aa25.5■■□□□ 1.67
COPS7A-210ENST00000539735 CHGAP10645 457 aaKnown RBP25.48■■□□□ 1.67
COPS7A-210ENST00000539735 PTPRTO14522 1441 aa25.48■■□□□ 1.67
COPS7A-210ENST00000539735 ZNF142P52746 1687 aaPredicted RBP25.46■■□□□ 1.67
COPS7A-210ENST00000539735 HSPA5P11021 654 aaKnown RBP25.45■■□□□ 1.66
COPS7A-210ENST00000539735 EIF4G2P78344 907 aaKnown RBP eCLIP25.45■■□□□ 1.66
COPS7A-210ENST00000539735 PLA2R1Q13018 1463 aa25.43■■□□□ 1.66
COPS7A-210ENST00000539735 NCKAP5LQ9HCH0 1330 aa25.41■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms