RNA–Protein interactions for RNA: ENST00000539416.5

NEK6-212, Transcript of NIMA related kinase 6, humanhuman

TSL 2 BASIC

Gene NEK6, Length 2,582 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK6-212ENST00000539416 TSPY10P0CW01 314 aa16.24■□□□□ 0.19
NEK6-212ENST00000539416 KIF13AQ9H1H9 1805 aa16.24■□□□□ 0.19
NEK6-212ENST00000539416 C9orf84Q5VXU9 1444 aa16.24■□□□□ 0.19
NEK6-212ENST00000539416 CCDC184Q52MB2 194 aa16.23■□□□□ 0.19
NEK6-212ENST00000539416 NCOA1Q15788 1441 aa16.23■□□□□ 0.19
NEK6-212ENST00000539416 ZBTB47Q9UFB7 747 aaPredicted RBP16.23■□□□□ 0.19
NEK6-212ENST00000539416 ADGRL1O94910 1474 aa16.23■□□□□ 0.19
NEK6-212ENST00000539416 ANKRD30AQ9BXX3 1397 aa16.22■□□□□ 0.19
NEK6-212ENST00000539416 SCAPERQ9BY12 1400 aa16.21■□□□□ 0.19
NEK6-212ENST00000539416 TRAPPC8Q9Y2L5 1435 aa16.21■□□□□ 0.19
NEK6-212ENST00000539416 ANP32AP39687 249 aaKnown RBP16.21■□□□□ 0.19
NEK6-212ENST00000539416 RRP7BPQ9NSQ0 103 aa16.21■□□□□ 0.18
NEK6-212ENST00000539416 PPRC1Q5VV67 1664 aaKnown RBP16.2■□□□□ 0.18
NEK6-212ENST00000539416 WASHC2AQ641Q2 1341 aa16.19■□□□□ 0.18
NEK6-212ENST00000539416 RTEL1-TNFRSF6BF6WH68 1400 aa16.19■□□□□ 0.18
NEK6-212ENST00000539416 TEX14Q8IWB6 1497 aa16.18■□□□□ 0.18
NEK6-212ENST00000539416 PLXNC1O60486 1568 aa16.17■□□□□ 0.18
NEK6-212ENST00000539416 ZNF518AQ6AHZ1 1483 aa16.15■□□□□ 0.18
NEK6-212ENST00000539416 POGZQ7Z3K3 1410 aa16.15■□□□□ 0.18
NEK6-212ENST00000539416 AFAP1Q8N556 730 aa16.15■□□□□ 0.18
NEK6-212ENST00000539416 KDM6BO15054 1643 aa16.15■□□□□ 0.18
NEK6-212ENST00000539416 SPAG9O60271 1321 aaKnown RBP16.14■□□□□ 0.17
NEK6-212ENST00000539416 DENND4BO75064 1496 aaPredicted RBP16.14■□□□□ 0.17
NEK6-212ENST00000539416 TSPOAP1O95153 1857 aa16.14■□□□□ 0.17
NEK6-212ENST00000539416 KDM5CP41229 1560 aa16.14■□□□□ 0.17
NEK6-212ENST00000539416 INO80Q9ULG1 1556 aaPredicted RBP16.14■□□□□ 0.17
NEK6-212ENST00000539416 FAM9BQ8IZU0 186 aa16.14■□□□□ 0.17
NEK6-212ENST00000539416 KIF15Q9NS87 1388 aa16.13■□□□□ 0.17
NEK6-212ENST00000539416 ZFYVE16Q7Z3T8 1539 aa16.13■□□□□ 0.17
NEK6-212ENST00000539416 TONSLQ96HA7 1378 aa16.12■□□□□ 0.17
NEK6-212ENST00000539416 ATP7AQ04656 1500 aa16.11■□□□□ 0.17
NEK6-212ENST00000539416 ANKRD50Q9ULJ7 1429 aa16.11■□□□□ 0.17
NEK6-212ENST00000539416 DUOX2Q9NRD8 1548 aa16.11■□□□□ 0.17
NEK6-212ENST00000539416 LAS1LQ9Y4W2 734 aaKnown RBP16.11■□□□□ 0.17
NEK6-212ENST00000539416 MLH3Q9UHC1 1453 aa16.11■□□□□ 0.17
NEK6-212ENST00000539416 RICTORQ6R327 1708 aa16.1■□□□□ 0.17
NEK6-212ENST00000539416 NEFMP07197 916 aa16.09■□□□□ 0.17
NEK6-212ENST00000539416 KIDINS220Q9ULH0 1771 aa16.09■□□□□ 0.17
NEK6-212ENST00000539416 ZBED9Q6R2W3 1325 aa16.09■□□□□ 0.17
NEK6-212ENST00000539416 C11orf95C9JLR9 678 aaPredicted RBP16.08■□□□□ 0.17
NEK6-212ENST00000539416 WASHC2CQ9Y4E1 1318 aa16.08■□□□□ 0.16
NEK6-212ENST00000539416 BRPF3Q9ULD4 1205 aa16.07■□□□□ 0.16
NEK6-212ENST00000539416 HECW2Q9P2P5 1572 aa16.07■□□□□ 0.16
NEK6-212ENST00000539416 FRMPD1Q5SYB0 1578 aa16.07■□□□□ 0.16
NEK6-212ENST00000539416 ERBINQ96RT1 1412 aa16.06■□□□□ 0.16
NEK6-212ENST00000539416 EIF5BO60841 1220 aaKnown RBP16.06■□□□□ 0.16
NEK6-212ENST00000539416 NPM2Q86SE8 214 aaKnown RBP16.06■□□□□ 0.16
NEK6-212ENST00000539416 ZMYM4Q5VZL5 1548 aa16.05■□□□□ 0.16
NEK6-212ENST00000539416 RAPGEF3O95398 923 aa16.04■□□□□ 0.16
NEK6-212ENST00000539416 MRS2Q9HD23 443 aa16.04■□□□□ 0.16
NEK6-212ENST00000539416 HSPA5P11021 654 aaKnown RBP16.03■□□□□ 0.16
NEK6-212ENST00000539416 DHX29Q7Z478 1369 aaKnown RBP16.03■□□□□ 0.16
NEK6-212ENST00000539416 KDM5DQ9BY66 1539 aa16.02■□□□□ 0.16
NEK6-212ENST00000539416 MAGI2Q86UL8 1455 aa16.02■□□□□ 0.16
NEK6-212ENST00000539416 UNC13BO14795 1591 aa16.01■□□□□ 0.15
NEK6-212ENST00000539416 PRKRIP1Q9H875 184 aaPredicted RBP16.01■□□□□ 0.15
NEK6-212ENST00000539416 EIF2AK4Q9P2K8 1649 aaKnown RBP16.01■□□□□ 0.15
NEK6-212ENST00000539416 USP35Q9P2H5 1018 aa16.01■□□□□ 0.15
NEK6-212ENST00000539416 TRHP20396 242 aaPredicted RBP16■□□□□ 0.15
NEK6-212ENST00000539416 ABCA6Q8N139 1617 aa16■□□□□ 0.15
NEK6-212ENST00000539416 A2MP01023 1474 aa15.99■□□□□ 0.15
NEK6-212ENST00000539416 PZPP20742 1482 aa15.99■□□□□ 0.15
NEK6-212ENST00000539416 COL17A1Q9UMD9 1497 aaPredicted RBP15.99■□□□□ 0.15
NEK6-212ENST00000539416 MPHOSPH9Q99550 1183 aa15.99■□□□□ 0.15
NEK6-212ENST00000539416 DIP2CQ9Y2E4 1556 aa15.99■□□□□ 0.15
NEK6-212ENST00000539416 CNTLNQ9NXG0 1405 aa15.98■□□□□ 0.15
NEK6-212ENST00000539416 BCORL1Q5H9F3 1711 aa15.97■□□□□ 0.15
NEK6-212ENST00000539416 DEPDC5O75140 1603 aa15.96■□□□□ 0.15
NEK6-212ENST00000539416 RNF123Q5XPI4 1314 aa15.96■□□□□ 0.15
NEK6-212ENST00000539416 NUP155O75694 1391 aa15.96■□□□□ 0.15
NEK6-212ENST00000539416 SMG6Q86US8 1419 aaKnown RBP15.95■□□□□ 0.14
NEK6-212ENST00000539416 IQGAP3Q86VI3 1631 aa15.94■□□□□ 0.14
NEK6-212ENST00000539416 YEATS2Q9ULM3 1422 aa15.94■□□□□ 0.14
NEK6-212ENST00000539416 REREQ9P2R6 1566 aa15.94■□□□□ 0.14
NEK6-212ENST00000539416 SENP3-EIF4A1A0A087X0R7 540 aa15.93■□□□□ 0.14
NEK6-212ENST00000539416 SLC4A1APQ9BWU0 796 aaKnown RBP15.93■□□□□ 0.14
NEK6-212ENST00000539416 ATP10AO60312 1499 aa15.93■□□□□ 0.14
NEK6-212ENST00000539416 NUDCQ9Y266 331 aa15.93■□□□□ 0.14
NEK6-212ENST00000539416 RNF17Q9BXT8 1623 aaKnown RBP15.92■□□□□ 0.14
NEK6-212ENST00000539416 FAM135AQ9P2D6 1515 aa15.92■□□□□ 0.14
NEK6-212ENST00000539416 PPM1GO15355 546 aaPredicted RBP15.92■□□□□ 0.14
NEK6-212ENST00000539416 GSE1Q14687 1217 aa15.91■□□□□ 0.14
NEK6-212ENST00000539416 VWDEQ8N2E2 1590 aa15.91■□□□□ 0.14
NEK6-212ENST00000539416 KIF3BO15066 747 aa15.9■□□□□ 0.14
NEK6-212ENST00000539416 PDE4AP27815 886 aa15.9■□□□□ 0.14
NEK6-212ENST00000539416 MROH1Q8NDA8 1641 aa15.9■□□□□ 0.14
NEK6-212ENST00000539416 EIF4G2P78344 907 aaKnown RBP eCLIP15.9■□□□□ 0.14
NEK6-212ENST00000539416 PRDM15P57071 1507 aaPredicted RBP15.9■□□□□ 0.14
NEK6-212ENST00000539416 ARHGEF40Q8TER5 1519 aa15.89■□□□□ 0.13
NEK6-212ENST00000539416 AGLP35573 1532 aa15.88■□□□□ 0.13
NEK6-212ENST00000539416 KANK1Q14678 1352 aa15.88■□□□□ 0.13
NEK6-212ENST00000539416 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.88■□□□□ 0.132e-8■□□□□ 10.5
NEK6-212ENST00000539416 ANKRD30BQ9BXX2 1392 aa15.88■□□□□ 0.13
NEK6-212ENST00000539416 PKD2Q13563 968 aa15.87■□□□□ 0.13
NEK6-212ENST00000539416 CCDC7Q96M83 1385 aa15.87■□□□□ 0.13
NEK6-212ENST00000539416 FRAT1Q92837 279 aaPredicted RBP15.87■□□□□ 0.13
NEK6-212ENST00000539416 PKNOX2Q96KN3 472 aa15.86■□□□□ 0.13
NEK6-212ENST00000539416 BACH2Q9BYV9 841 aa15.86■□□□□ 0.13
NEK6-212ENST00000539416 LMTK2Q8IWU2 1503 aa15.86■□□□□ 0.13
NEK6-212ENST00000539416 TET3O43151 1660 aa15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 122.5 ms