RNA–Protein interactions for RNA: ENST00000537965.5

SNHG1-207, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5

Gene SNHG1, Length 578 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-207ENST00000537965 ERCC6L2Q5T890 1561 aa9.44□□□□□ -0.9
SNHG1-207ENST00000537965 FOXK1P85037 733 aa9.43□□□□□ -0.9
SNHG1-207ENST00000537965 PAXIP1Q6ZW49 1069 aaPredicted RBP9.43□□□□□ -0.9
SNHG1-207ENST00000537965 ZSWIM6Q9HCJ5 1215 aa9.43□□□□□ -0.9
SNHG1-207ENST00000537965 NCKAP5LQ9HCH0 1330 aa9.42□□□□□ -0.9
SNHG1-207ENST00000537965 PDE4AP27815 886 aa9.42□□□□□ -0.9
SNHG1-207ENST00000537965 JPH4Q96JJ6 628 aa9.42□□□□□ -0.9
SNHG1-207ENST00000537965 SLC34A2O95436 690 aa9.41□□□□□ -0.9
SNHG1-207ENST00000537965 HOXB1P14653 301 aaPredicted RBP9.41□□□□□ -0.9
SNHG1-207ENST00000537965 DSG2Q14126 1118 aa9.41□□□□□ -0.9
SNHG1-207ENST00000537965 CFAP44Q96MT7 982 aa9.41□□□□□ -0.9
SNHG1-207ENST00000537965 PRG4Q92954 1404 aaPredicted RBP9.4□□□□□ -0.9
SNHG1-207ENST00000537965 GPR153Q6NV75 609 aa9.4□□□□□ -0.9
SNHG1-207ENST00000537965 PLPP6Q8IY26 295 aa9.4□□□□□ -0.9
SNHG1-207ENST00000537965 MARVELD3Q96A59 401 aa9.4□□□□□ -0.9
SNHG1-207ENST00000537965 CADPS2Q86UW7 1296 aa9.39□□□□□ -0.91
SNHG1-207ENST00000537965 EMP3P54852 163 aa9.37□□□□□ -0.91
SNHG1-207ENST00000537965 FAM69CQ0P6D2 419 aa9.36□□□□□ -0.91
SNHG1-207ENST00000537965 ARSIQ5FYB1 569 aa9.36□□□□□ -0.91
SNHG1-207ENST00000537965 LARP6Q9BRS8 491 aaKnown RBP9.36□□□□□ -0.91
SNHG1-207ENST00000537965 MFSD10Q14728 455 aa9.35□□□□□ -0.91
SNHG1-207ENST00000537965 PPP1R15BQ5SWA1 713 aa9.35□□□□□ -0.91
SNHG1-207ENST00000537965 MAPKBP1O60336 1514 aa9.35□□□□□ -0.91
SNHG1-207ENST00000537965 RUSC2Q8N2Y8 1516 aa9.35□□□□□ -0.91
SNHG1-207ENST00000537965 ABCC10Q5T3U5 1492 aa9.34□□□□□ -0.91
SNHG1-207ENST00000537965 TSPOAP1O95153 1857 aa9.34□□□□□ -0.91
SNHG1-207ENST00000537965 PTCD2Q8WV60 388 aaKnown RBP9.34□□□□□ -0.91
SNHG1-207ENST00000537965 PCDH10Q9P2E7 1040 aa9.34□□□□□ -0.91
SNHG1-207ENST00000537965 DDX27Q96GQ7 796 aaKnown RBP9.33□□□□□ -0.92
SNHG1-207ENST00000537965 PCDHGA4Q9Y5G9 962 aa9.33□□□□□ -0.92
SNHG1-207ENST00000537965 CUL7Q14999 1698 aa9.32□□□□□ -0.92
SNHG1-207ENST00000537965 KIAA0586Q9BVV6 1533 aa9.32□□□□□ -0.92
SNHG1-207ENST00000537965 KHSRPQ92945 711 aaKnown RBP eCLIP9.32□□□□□ -0.923e-16■■□□□ 12.4
SNHG1-207ENST00000537965 FAM205CA6NFA0 338 aa9.31□□□□□ -0.92
SNHG1-207ENST00000537965 ADCY10Q96PN6 1610 aa9.31□□□□□ -0.92
SNHG1-207ENST00000537965 KIF27Q86VH2 1401 aa9.31□□□□□ -0.92
SNHG1-207ENST00000537965 DIP2BQ9P265 1576 aa9.3□□□□□ -0.92
SNHG1-207ENST00000537965 CDAN1Q8IWY9 1227 aa9.3□□□□□ -0.92
SNHG1-207ENST00000537965 HS3ST6Q96QI5 342 aa9.3□□□□□ -0.92
SNHG1-207ENST00000537965 KDM6BO15054 1643 aa9.3□□□□□ -0.92
SNHG1-207ENST00000537965 POTEB3A0JP26 581 aa9.29□□□□□ -0.92
SNHG1-207ENST00000537965 POTEBQ6S5H4 581 aa9.29□□□□□ -0.92
SNHG1-207ENST00000537965 ERBB3P21860 1342 aa9.29□□□□□ -0.92
SNHG1-207ENST00000537965 TBC1D12O60347 775 aa9.28□□□□□ -0.92
SNHG1-207ENST00000537965 NUDT7P0C024 238 aa9.28□□□□□ -0.92
SNHG1-207ENST00000537965 OXER1Q8TDS5 423 aa9.28□□□□□ -0.92
SNHG1-207ENST00000537965 IGF1RP08069 1367 aa9.27□□□□□ -0.93
SNHG1-207ENST00000537965 KDM4FA0A1W2PPD8 638 aa9.27□□□□□ -0.93
SNHG1-207ENST00000537965 PTPRGP23470 1445 aa9.27□□□□□ -0.93
SNHG1-207ENST00000537965 CARMIL2Q6F5E8 1435 aa9.27□□□□□ -0.93
SNHG1-207ENST00000537965 ZNF316A6NFI3 1004 aaPredicted RBP9.25□□□□□ -0.93
SNHG1-207ENST00000537965 VARS2Q5ST30 1063 aaKnown RBP9.25□□□□□ -0.93
SNHG1-207ENST00000537965 PLSCR2Q9NRY7 297 aa9.25□□□□□ -0.93
SNHG1-207ENST00000537965 TNIKQ9UKE5 1360 aa9.24□□□□□ -0.93
SNHG1-207ENST00000537965 PLCB2Q00722 1185 aa9.24□□□□□ -0.93
SNHG1-207ENST00000537965 UPF1Q92900 1129 aaKnown RBP eCLIP9.24□□□□□ -0.93
SNHG1-207ENST00000537965 TSHZ2Q9NRE2 1034 aa9.24□□□□□ -0.93
SNHG1-207ENST00000537965 CARMIL1Q5VZK9 1371 aa9.24□□□□□ -0.93
SNHG1-207ENST00000537965 PLB1Q6P1J6 1458 aa9.23□□□□□ -0.93
SNHG1-207ENST00000537965 CAMK2BQ13554 666 aa9.23□□□□□ -0.93
SNHG1-207ENST00000537965 ABCC2Q92887 1545 aa9.22□□□□□ -0.93
SNHG1-207ENST00000537965 EMILIN3Q9NT22 766 aa9.22□□□□□ -0.93
SNHG1-207ENST00000537965 LHX6Q9UPM6 363 aa9.22□□□□□ -0.93
SNHG1-207ENST00000537965 GLI2P10070 1586 aa9.21□□□□□ -0.93
SNHG1-207ENST00000537965 IQGAP2Q13576 1575 aa9.21□□□□□ -0.93
SNHG1-207ENST00000537965 ZNF687Q8N1G0 1237 aa9.2□□□□□ -0.94
SNHG1-207ENST00000537965 TTBK1Q5TCY1 1321 aaPredicted RBP9.2□□□□□ -0.94
SNHG1-207ENST00000537965 UHRF1BP1LA0JNW5 1464 aa9.2□□□□□ -0.94
SNHG1-207ENST00000537965 ASXL2Q76L83 1435 aa9.19□□□□□ -0.94
SNHG1-207ENST00000537965 PSDA5PKW4 1024 aaPredicted RBP9.18□□□□□ -0.94
SNHG1-207ENST00000537965 MAP3K9P80192 1104 aa9.18□□□□□ -0.94
SNHG1-207ENST00000537965 UACAQ9BZF9 1416 aa9.18□□□□□ -0.94
SNHG1-207ENST00000537965 WDR70Q9NW82 654 aa9.18□□□□□ -0.94
SNHG1-207ENST00000537965 PPRC1Q5VV67 1664 aaKnown RBP9.17□□□□□ -0.94
SNHG1-207ENST00000537965 TEX14Q8IWB6 1497 aa9.17□□□□□ -0.94
SNHG1-207ENST00000537965 KRTAP3-3Q9BYR6 98 aa9.17□□□□□ -0.94
SNHG1-207ENST00000537965 KRTAP3-2Q9BYR7 98 aa9.17□□□□□ -0.94
SNHG1-207ENST00000537965 ANO8Q9HCE9 1232 aaPredicted RBP9.17□□□□□ -0.94
SNHG1-207ENST00000537965 EVI5O60447 810 aa9.16□□□□□ -0.94
SNHG1-207ENST00000537965 E2F4Q16254 413 aa9.16□□□□□ -0.94
SNHG1-207ENST00000537965 MAP3K4Q9Y6R4 1608 aa9.16□□□□□ -0.94
SNHG1-207ENST00000537965 FAM9AQ8IZU1 332 aaPredicted RBP9.15□□□□□ -0.94
SNHG1-207ENST00000537965 KDM5BQ9UGL1 1544 aa9.15□□□□□ -0.95
SNHG1-207ENST00000537965 RAPGEF2Q9Y4G8 1499 aa9.15□□□□□ -0.95
SNHG1-207ENST00000537965 UGGT2Q9NYU1 1516 aa9.14□□□□□ -0.95
SNHG1-207ENST00000537965 ZCCHC11Q5TAX3 1644 aaKnown RBP9.13□□□□□ -0.95
SNHG1-207ENST00000537965 EPRSP07814 1512 aaKnown RBP9.13□□□□□ -0.95
SNHG1-207ENST00000537965 DISP1Q96F81 1524 aa9.13□□□□□ -0.95
SNHG1-207ENST00000537965 CTTNBP2Q8WZ74 1663 aa9.13□□□□□ -0.95
SNHG1-207ENST00000537965 DPYSL4O14531 572 aa9.12□□□□□ -0.95
SNHG1-207ENST00000537965 ADGRL1O94910 1474 aa9.11□□□□□ -0.95
SNHG1-207ENST00000537965 PPP4R3BQ5MIZ7 849 aa9.11□□□□□ -0.95
SNHG1-207ENST00000537965 ARIH1Q9Y4X5 557 aaPredicted RBP9.11□□□□□ -0.95
SNHG1-207ENST00000537965 KIAA0556O60303 1618 aa9.11□□□□□ -0.95
SNHG1-207ENST00000537965 CFAP43Q8NDM7 1665 aa9.1□□□□□ -0.95
SNHG1-207ENST00000537965 GOLGA3Q08378 1498 aa9.1□□□□□ -0.95
SNHG1-207ENST00000537965 PBX2P40425 430 aa9.1□□□□□ -0.95
SNHG1-207ENST00000537965 FOSBP53539 338 aa9.09□□□□□ -0.95
SNHG1-207ENST00000537965 POTEEQ6S8J3 1075 aa9.09□□□□□ -0.95
SNHG1-207ENST00000537965 WDR7Q9Y4E6 1490 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 509.7 ms