RNA–Protein interactions for RNA: ENST00000535535.5

LMO3-212, Transcript of LIM domain only 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene LMO3, Length 1,488 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-212ENST00000535535 FBXW7Q969H0 707 aa15.46■□□□□ 0.06
LMO3-212ENST00000535535 E2F4Q16254 413 aa15.45■□□□□ 0.06
LMO3-212ENST00000535535 PPP1R3GB7ZBB8 358 aa15.41■□□□□ 0.06
LMO3-212ENST00000535535 EPAS1Q99814 870 aa15.41■□□□□ 0.06
LMO3-212ENST00000535535 ARIH1Q9Y4X5 557 aaPredicted RBP15.41■□□□□ 0.06
LMO3-212ENST00000535535 BHMG1C9JSJ3 638 aaPredicted RBP15.4■□□□□ 0.06
LMO3-212ENST00000535535 WDR70Q9NW82 654 aa15.4■□□□□ 0.06
LMO3-212ENST00000535535 COL9A1P20849 921 aa15.39■□□□□ 0.05
LMO3-212ENST00000535535 MYO15BQ96JP2 1530 aa15.38■□□□□ 0.05
LMO3-212ENST00000535535 DDX12PQ92771 950 aa15.38■□□□□ 0.05
LMO3-212ENST00000535535 SPDYE16A6NNV3 312 aaPredicted RBP15.37■□□□□ 0.05
LMO3-212ENST00000535535 STAC3Q96MF2 364 aa15.36■□□□□ 0.05
LMO3-212ENST00000535535 TSHZ2Q9NRE2 1034 aa15.36■□□□□ 0.05
LMO3-212ENST00000535535 HCSTQ9UBK5 93 aa15.35■□□□□ 0.05
LMO3-212ENST00000535535 KCTD12Q96CX2 325 aaKnown RBP15.34■□□□□ 0.05
LMO3-212ENST00000535535 PROX2Q3B8N5 592 aa15.33■□□□□ 0.04
LMO3-212ENST00000535535 C6orf132Q5T0Z8 1188 aa15.32■□□□□ 0.04
LMO3-212ENST00000535535 NBR1Q14596 966 aa15.3■□□□□ 0.04
LMO3-212ENST00000535535 RBM33Q96EV2 1170 aaKnown RBP15.3■□□□□ 0.04
LMO3-212ENST00000535535 EN1Q05925 392 aaPredicted RBP15.29■□□□□ 0.04
LMO3-212ENST00000535535 NBPF3Q9H094 633 aa15.28■□□□□ 0.04
LMO3-212ENST00000535535 MRPL50Q8N5N7 158 aaKnown RBP15.27■□□□□ 0.04
LMO3-212ENST00000535535 RABGEF1Q9UJ41 708 aa15.27■□□□□ 0.04
LMO3-212ENST00000535535 PRIM1P49642 420 aaKnown RBP15.23■□□□□ 0.03
LMO3-212ENST00000535535 TSR1Q2NL82 804 aaKnown RBP15.23■□□□□ 0.03
LMO3-212ENST00000535535 MAP3K7O43318 606 aa15.22■□□□□ 0.03
LMO3-212ENST00000535535 THSD4Q6ZMP0 1018 aa15.22■□□□□ 0.03
LMO3-212ENST00000535535 CC2D2AQ9P2K1 1620 aa15.21■□□□□ 0.02
LMO3-212ENST00000535535 SHROOM4Q9ULL8 1493 aa15.21■□□□□ 0.02
LMO3-212ENST00000535535 ONECUT3O60422 494 aaPredicted RBP15.2■□□□□ 0.02
LMO3-212ENST00000535535 GOLGA8CPA6NN73 597 aa15.2■□□□□ 0.02
LMO3-212ENST00000535535 WNT2BQ93097 391 aa15.2■□□□□ 0.02
LMO3-212ENST00000535535 GRXCR2A6NFK2 248 aa15.19■□□□□ 0.02
LMO3-212ENST00000535535 TRIM6-TRIM34B2RNG4 842 aa15.19■□□□□ 0.02
LMO3-212ENST00000535535 KIAA1468Q9P260 1216 aa15.19■□□□□ 0.02
LMO3-212ENST00000535535 KCNV2Q8TDN2 545 aa15.17■□□□□ 0.02
LMO3-212ENST00000535535 OSBPP22059 807 aa15.16■□□□□ 0.02
LMO3-212ENST00000535535 PTPN5P54829 565 aa15.16■□□□□ 0.02
LMO3-212ENST00000535535 LAPTM4BQ86VI4 370 aa15.16■□□□□ 0.02
LMO3-212ENST00000535535 PLA2G2EQ9NZK7 142 aa15.16■□□□□ 0.02
LMO3-212ENST00000535535 CECR2Q9BXF3 1484 aa15.15■□□□□ 0.02
LMO3-212ENST00000535535 PLCB2Q00722 1185 aa15.14■□□□□ 0.01
LMO3-212ENST00000535535 ARHGEF1Q92888 912 aaKnown RBP15.13■□□□□ 0.01
LMO3-212ENST00000535535 SEPT9Q9UHD8 586 aaPredicted RBP15.12■□□□□ 0.01
LMO3-212ENST00000535535 TSKSQ9UJT2 592 aa15.11■□□□□ 0.01
LMO3-212ENST00000535535 ANKK1Q8NFD2 765 aa15.1■□□□□ 0.01
LMO3-212ENST00000535535 CDHR5Q9HBB8 845 aa15.09■□□□□ 0.01
LMO3-212ENST00000535535 EIF4G1Q04637 1599 aaKnown RBP15.09■□□□□ 0.01
LMO3-212ENST00000535535 ZFRQ96KR1 1074 aaKnown RBP15.08■□□□□ 0.01
LMO3-212ENST00000535535 DCAF1Q9Y4B6 1507 aa15.07■□□□□ 0
LMO3-212ENST00000535535 FAM98CQ17RN3 349 aaKnown RBP15.07■□□□□ 0
LMO3-212ENST00000535535 CERKQ8TCT0 537 aa15.07■□□□□ 0
LMO3-212ENST00000535535 ZCCHC6Q5VYS8 1495 aaKnown RBP15.06■□□□□ 0
LMO3-212ENST00000535535 PRSS12P56730 875 aa15.06■□□□□ 0
LMO3-212ENST00000535535 CDCA7LQ96GN5 454 aa15.06■□□□□ 0
LMO3-212ENST00000535535 FAM198AQ9UFP1 575 aa15.06■□□□□ 0
LMO3-212ENST00000535535 BCAMP50895 628 aa15.05■□□□□ -0
LMO3-212ENST00000535535 SOWAHBA6NEL2 793 aa15.04■□□□□ -0
LMO3-212ENST00000535535 PACS2Q86VP3 889 aa15.03■□□□□ -0
LMO3-212ENST00000535535 SCRIBQ14160 1630 aa15.03■□□□□ -0
LMO3-212ENST00000535535 MLLT3P42568 568 aaPredicted RBP15.02■□□□□ -0
LMO3-212ENST00000535535 P3H3Q8IVL6 736 aa15.01□□□□□ -0.01
LMO3-212ENST00000535535 RBM27Q9P2N5 1060 aaKnown RBP15□□□□□ -0.01
LMO3-212ENST00000535535 C3orf80F5H4A9 247 aa14.99□□□□□ -0.01
LMO3-212ENST00000535535 NPDC1Q9NQX5 325 aaPredicted RBP14.98□□□□□ -0.01
LMO3-212ENST00000535535 SMAPO00193 183 aa14.95□□□□□ -0.02
LMO3-212ENST00000535535 NBPF26B4DH59 902 aa14.95□□□□□ -0.02
LMO3-212ENST00000535535 IFFO2Q5TF58 517 aa14.95□□□□□ -0.02
LMO3-212ENST00000535535 TTC13Q8NBP0 860 aa14.94□□□□□ -0.02
LMO3-212ENST00000535535 LRCH3Q96II8 777 aa14.94□□□□□ -0.02
LMO3-212ENST00000535535 CDKN2AIPQ9NXV6 580 aaPredicted RBP14.94□□□□□ -0.02
LMO3-212ENST00000535535 TATDN2Q93075 761 aa14.93□□□□□ -0.02
LMO3-212ENST00000535535 WBP1LQ9NX94 342 aa14.93□□□□□ -0.02
LMO3-212ENST00000535535 PNMA3Q9UL41 463 aa14.91□□□□□ -0.02
LMO3-212ENST00000535535 PADI6Q6TGC4 694 aa14.9□□□□□ -0.02
LMO3-212ENST00000535535 NYAP1Q6ZVC0 841 aa14.9□□□□□ -0.02
LMO3-212ENST00000535535 TSR3Q9UJK0 312 aaKnown RBP14.89□□□□□ -0.03
LMO3-212ENST00000535535 HPS5Q9UPZ3 1129 aa14.89□□□□□ -0.03
LMO3-212ENST00000535535 NUDT18Q6ZVK8 323 aa14.88□□□□□ -0.03
LMO3-212ENST00000535535 SEMA3EO15041 775 aa14.87□□□□□ -0.03
LMO3-212ENST00000535535 ITGBL1O95965 494 aaPredicted RBP14.87□□□□□ -0.03
LMO3-212ENST00000535535 SAMD7Q7Z3H4 446 aa14.87□□□□□ -0.03
LMO3-212ENST00000535535 HAP1P54257 671 aaPredicted RBP14.84□□□□□ -0.03
LMO3-212ENST00000535535 PTGDRQ13258 359 aa14.84□□□□□ -0.03
LMO3-212ENST00000535535 A0A0G2JS52 829 aa14.81□□□□□ -0.04
LMO3-212ENST00000535535 TESPA1A2RU30 521 aaPredicted RBP14.77□□□□□ -0.04
LMO3-212ENST00000535535 PPP4CP60510 307 aa14.77□□□□□ -0.04
LMO3-212ENST00000535535 EYA1Q99502 592 aa14.77□□□□□ -0.04
LMO3-212ENST00000535535 KDM2AQ9Y2K7 1162 aa14.77□□□□□ -0.04
LMO3-212ENST00000535535 NUTM2FA1L443 756 aa14.76□□□□□ -0.05
LMO3-212ENST00000535535 SWT1Q5T5J6 900 aaKnown RBP14.72□□□□□ -0.05
LMO3-212ENST00000535535 RNF40O75150 1001 aa14.7□□□□□ -0.06
LMO3-212ENST00000535535 RGS20O76081 388 aa14.7□□□□□ -0.06
LMO3-212ENST00000535535 FCHSD2O94868 740 aa14.7□□□□□ -0.06
LMO3-212ENST00000535535 KCNC4Q03721 635 aa14.7□□□□□ -0.06
LMO3-212ENST00000535535 ADGRG1Q9Y653 693 aa14.7□□□□□ -0.06
LMO3-212ENST00000535535 HDGFP51858 240 aaKnown RBP14.69□□□□□ -0.06
LMO3-212ENST00000535535 SLF2Q8IX21 1173 aa14.67□□□□□ -0.06
LMO3-212ENST00000535535 RBM26Q5T8P6 1007 aaKnown RBP14.66□□□□□ -0.06
LMO3-212ENST00000535535 APLP1P51693 650 aa14.65□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms