RNA–Protein interactions for RNA: ENST00000535237.2

GOPC-203, Transcript of golgi associated PDZ and coiled-coil motif containing, humanhuman

TSL 1 (best) BASIC

Gene GOPC, Length 4,460 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GOPC-203ENST00000535237 PANK3Q9H999 370 aa18.75■□□□□ 0.59
GOPC-203ENST00000535237 SRPK2P78362 688 aaKnown RBP18.74■□□□□ 0.59
GOPC-203ENST00000535237 FAM13BQ9NYF5 915 aa18.74■□□□□ 0.59
GOPC-203ENST00000535237 FHOD3Q2V2M9 1422 aa18.73■□□□□ 0.59
GOPC-203ENST00000535237 WASHC2AQ641Q2 1341 aa18.73■□□□□ 0.59
GOPC-203ENST00000535237 FRAT2O75474 233 aaPredicted RBP18.73■□□□□ 0.59
GOPC-203ENST00000535237 FOXD4L5Q5VV16 416 aaPredicted RBP18.73■□□□□ 0.59
GOPC-203ENST00000535237 FOXD4L4Q8WXT5 416 aaPredicted RBP18.73■□□□□ 0.59
GOPC-203ENST00000535237 RRP7AQ9Y3A4 280 aaKnown RBP18.73■□□□□ 0.59
GOPC-203ENST00000535237 CC2D2AQ9P2K1 1620 aa18.73■□□□□ 0.59
GOPC-203ENST00000535237 TOP2AP11388 1531 aaKnown RBP18.73■□□□□ 0.59
GOPC-203ENST00000535237 CGNL1Q0VF96 1302 aa18.72■□□□□ 0.59
GOPC-203ENST00000535237 CCDC7Q96M83 1385 aa18.71■□□□□ 0.59
GOPC-203ENST00000535237 KIF7Q2M1P5 1343 aa18.71■□□□□ 0.59
GOPC-203ENST00000535237 USP47Q96K76 1375 aa18.71■□□□□ 0.59
GOPC-203ENST00000535237 NOL8Q76FK4 1167 aaKnown RBP18.71■□□□□ 0.59
GOPC-203ENST00000535237 FAM43AQ8N2R8 423 aa18.7■□□□□ 0.58
GOPC-203ENST00000535237 CHMP5Q9NZZ3 219 aa18.7■□□□□ 0.58
GOPC-203ENST00000535237 SKOR2Q2VWA4 1001 aaPredicted RBP18.7■□□□□ 0.58
GOPC-203ENST00000535237 APAF1O14727 1248 aa18.69■□□□□ 0.58
GOPC-203ENST00000535237 GGT6Q6P531 493 aa18.68■□□□□ 0.58
GOPC-203ENST00000535237 KIAA1211Q6ZU35 1233 aa18.68■□□□□ 0.58
GOPC-203ENST00000535237 HAP1P54257 671 aaPredicted RBP18.68■□□□□ 0.58
GOPC-203ENST00000535237 CCDC18Q5T9S5 1454 aa18.68■□□□□ 0.58
GOPC-203ENST00000535237 ANKRD30AQ9BXX3 1397 aa18.67■□□□□ 0.58
GOPC-203ENST00000535237 TNNT3P45378 269 aaPredicted RBP18.66■□□□□ 0.58
GOPC-203ENST00000535237 E9PSI1 815 aa18.66■□□□□ 0.58
GOPC-203ENST00000535237 EFCAB2Q5VUJ9 269 aa18.65■□□□□ 0.58
GOPC-203ENST00000535237 ST18O60284 1047 aa18.65■□□□□ 0.58
GOPC-203ENST00000535237 SOX12O15370 315 aa18.65■□□□□ 0.58
GOPC-203ENST00000535237 CNTLNQ9NXG0 1405 aa18.65■□□□□ 0.58
GOPC-203ENST00000535237 BACH2Q9BYV9 841 aa18.64■□□□□ 0.57
GOPC-203ENST00000535237 NESP48681 1621 aa18.64■□□□□ 0.57
GOPC-203ENST00000535237 FOXD4L6Q3SYB3 417 aaPredicted RBP18.63■□□□□ 0.57
GOPC-203ENST00000535237 FOXD4L3Q6VB84 417 aaPredicted RBP18.63■□□□□ 0.57
GOPC-203ENST00000535237 CDCA7LQ96GN5 454 aa18.63■□□□□ 0.57
GOPC-203ENST00000535237 FAM69CQ0P6D2 419 aa18.63■□□□□ 0.57
GOPC-203ENST00000535237 AKNAQ7Z591 1439 aa18.62■□□□□ 0.57
GOPC-203ENST00000535237 A0A0G2JS52 829 aa18.62■□□□□ 0.57
GOPC-203ENST00000535237 ANKRD45Q5TZF3 282 aa18.62■□□□□ 0.57
GOPC-203ENST00000535237 CCDC184Q52MB2 194 aa18.61■□□□□ 0.57
GOPC-203ENST00000535237 PKNOX2Q96KN3 472 aa18.61■□□□□ 0.57
GOPC-203ENST00000535237 TRIM6-TRIM34B2RNG4 842 aa18.61■□□□□ 0.57
GOPC-203ENST00000535237 STK26Q9P289 416 aa18.61■□□□□ 0.57
GOPC-203ENST00000535237 MRE11P49959 708 aa18.61■□□□□ 0.57
GOPC-203ENST00000535237 ZKSCAN2Q63HK3 967 aa18.6■□□□□ 0.57
GOPC-203ENST00000535237 PHF14O94880 888 aa18.6■□□□□ 0.57
GOPC-203ENST00000535237 PTPRGP23470 1445 aa18.58■□□□□ 0.57
GOPC-203ENST00000535237 PDZRN4Q6ZMN7 1036 aaPredicted RBP18.57■□□□□ 0.56
GOPC-203ENST00000535237 C22orf23Q9BZE7 217 aa18.57■□□□□ 0.56
GOPC-203ENST00000535237 TRAK2O60296 914 aa18.56■□□□□ 0.56
GOPC-203ENST00000535237 AQRO60306 1485 aaKnown RBP eCLIP18.56■□□□□ 0.562e-7■■■■□ 20
GOPC-203ENST00000535237 ELL2O00472 640 aaPredicted RBP18.56■□□□□ 0.56
GOPC-203ENST00000535237 RTF1Q92541 710 aaKnown RBP18.55■□□□□ 0.56
GOPC-203ENST00000535237 KANK1Q14678 1352 aa18.55■□□□□ 0.56
GOPC-203ENST00000535237 HMMRO75330 724 aa18.54■□□□□ 0.56
GOPC-203ENST00000535237 HNRNPMP52272 730 aaKnown RBP eCLIP18.54■□□□□ 0.56
GOPC-203ENST00000535237 HDGFL2Q7Z4V5 671 aaPredicted RBP18.54■□□□□ 0.56
GOPC-203ENST00000535237 R3HCC1Q9Y3T6 440 aaKnown RBP18.54■□□□□ 0.56
GOPC-203ENST00000535237 SLC4A10Q6U841 1118 aa18.53■□□□□ 0.56
GOPC-203ENST00000535237 PANK1Q8TE04 598 aa18.53■□□□□ 0.56
GOPC-203ENST00000535237 HTATSF1O43719 755 aaKnown RBP18.52■□□□□ 0.56
GOPC-203ENST00000535237 UACAQ9BZF9 1416 aa18.52■□□□□ 0.55
GOPC-203ENST00000535237 RAD54L2Q9Y4B4 1467 aa18.51■□□□□ 0.55
GOPC-203ENST00000535237 LMOD2Q6P5Q4 547 aa18.51■□□□□ 0.55
GOPC-203ENST00000535237 NASPP49321 788 aaPredicted RBP18.51■□□□□ 0.55
GOPC-203ENST00000535237 CSPP1Q1MSJ5 1256 aa18.51■□□□□ 0.55
GOPC-203ENST00000535237 ZNF771Q7L3S4 317 aaPredicted RBP18.5■□□□□ 0.55
GOPC-203ENST00000535237 KIF21BO75037 1637 aa18.49■□□□□ 0.55
GOPC-203ENST00000535237 DZIP1LQ8IYY4 767 aaKnown RBP18.49■□□□□ 0.55
GOPC-203ENST00000535237 EIF3AQ14152 1382 aaKnown RBP18.49■□□□□ 0.55
GOPC-203ENST00000535237 GAPVD1Q14C86 1478 aa18.49■□□□□ 0.55
GOPC-203ENST00000535237 ADAMTS8Q9UP79 889 aa18.49■□□□□ 0.55
GOPC-203ENST00000535237 LNPKQ9C0E8 428 aa18.49■□□□□ 0.55
GOPC-203ENST00000535237 DDX19BQ9UMR2 479 aa18.48■□□□□ 0.55
GOPC-203ENST00000535237 MCTP1Q6DN14 999 aa18.47■□□□□ 0.55
GOPC-203ENST00000535237 PNISRQ8TF01 805 aaKnown RBP18.47■□□□□ 0.55
GOPC-203ENST00000535237 BRD4O60885 1362 aaPredicted RBP18.47■□□□□ 0.55
GOPC-203ENST00000535237 HDGFP51858 240 aaKnown RBP18.47■□□□□ 0.55
GOPC-203ENST00000535237 STK31Q9BXU1 1019 aa18.46■□□□□ 0.55
GOPC-203ENST00000535237 GNL2Q13823 731 aaKnown RBP18.46■□□□□ 0.55
GOPC-203ENST00000535237 MRC2Q9UBG0 1479 aa18.46■□□□□ 0.55
GOPC-203ENST00000535237 FGD5Q6ZNL6 1462 aa18.45■□□□□ 0.54
GOPC-203ENST00000535237 CCDC144AA2RUR9 1427 aa18.45■□□□□ 0.54
GOPC-203ENST00000535237 TRAK1Q9UPV9 953 aa18.45■□□□□ 0.54
GOPC-203ENST00000535237 RILPL2Q969X0 211 aa18.45■□□□□ 0.54
GOPC-203ENST00000535237 KIF16BQ96L93 1317 aa18.44■□□□□ 0.54
GOPC-203ENST00000535237 RBM10P98175 930 aaKnown RBP18.44■□□□□ 0.54
GOPC-203ENST00000535237 NUCB2P80303 420 aa18.44■□□□□ 0.54
GOPC-203ENST00000535237 RNF214Q8ND24 703 aa18.43■□□□□ 0.54
GOPC-203ENST00000535237 ZNF592Q92610 1267 aa18.43■□□□□ 0.54
GOPC-203ENST00000535237 FGD6Q6ZV73 1430 aa18.43■□□□□ 0.54
GOPC-203ENST00000535237 MAP7D2Q96T17 732 aa18.43■□□□□ 0.54
GOPC-203ENST00000535237 TULP1O00294 542 aaPredicted RBP18.43■□□□□ 0.54
GOPC-203ENST00000535237 NGEFQ8N5V2 710 aa18.43■□□□□ 0.54
GOPC-203ENST00000535237 RRBP1Q9P2E9 1410 aaKnown RBP18.43■□□□□ 0.54
GOPC-203ENST00000535237 TPM2P07951 284 aa18.43■□□□□ 0.54
GOPC-203ENST00000535237 A0A0U1RQG5 324 aaPredicted RBP18.42■□□□□ 0.54
GOPC-203ENST00000535237 TERF2IPQ9NYB0 399 aa18.41■□□□□ 0.54
GOPC-203ENST00000535237 ATP6V1DQ9Y5K8 247 aa18.41■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms