RNA–Protein interactions for RNA: ENST00000533131.5

BDNF-217, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 3,878 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-217ENST00000533131 DDX10Q13206 875 aaKnown RBP9.09□□□□□ -0.95
BDNF-217ENST00000533131 BARGINQ6ZT62 677 aa9.09□□□□□ -0.95
BDNF-217ENST00000533131 RTL5Q5HYW3 569 aaPredicted RBP9.09□□□□□ -0.95
BDNF-217ENST00000533131 PLEKHD1A6NEE1 506 aa9.08□□□□□ -0.96
BDNF-217ENST00000533131 CADPS2Q86UW7 1296 aa9.08□□□□□ -0.96
BDNF-217ENST00000533131 ABCC8Q09428 1581 aa9.08□□□□□ -0.96
BDNF-217ENST00000533131 FAM43BQ6ZT52 329 aaPredicted RBP9.07□□□□□ -0.96
BDNF-217ENST00000533131 MRRFQ96E11 262 aaKnown RBP9.07□□□□□ -0.96
BDNF-217ENST00000533131 PPME1Q9Y570 386 aa9.07□□□□□ -0.96
BDNF-217ENST00000533131 CCDC88BA6NC98 1476 aa9.07□□□□□ -0.96
BDNF-217ENST00000533131 TRIM52Q96A61 297 aa9.07□□□□□ -0.96
BDNF-217ENST00000533131 DNAJC2Q99543 621 aaKnown RBP9.06□□□□□ -0.96
BDNF-217ENST00000533131 ZNF662Q6ZS27 426 aa9.05□□□□□ -0.96
BDNF-217ENST00000533131 VTI1AQ96AJ9 217 aa9.05□□□□□ -0.96
BDNF-217ENST00000533131 ZNF219Q9P2Y4 722 aaPredicted RBP9.05□□□□□ -0.96
BDNF-217ENST00000533131 APBB1IPQ7Z5R6 666 aaPredicted RBP9.05□□□□□ -0.96
BDNF-217ENST00000533131 LAMC3Q9Y6N6 1575 aa9.05□□□□□ -0.96
BDNF-217ENST00000533131 DRC1Q96MC2 740 aa9.05□□□□□ -0.96
BDNF-217ENST00000533131 ZNF330Q9Y3S2 320 aaPredicted RBP9.05□□□□□ -0.96
BDNF-217ENST00000533131 GPIHBP1Q8IV16 184 aa9.04□□□□□ -0.96
BDNF-217ENST00000533131 NAP1L2Q9ULW6 460 aaPredicted RBP9.04□□□□□ -0.96
BDNF-217ENST00000533131 TOP2AP11388 1531 aaKnown RBP9.04□□□□□ -0.96
BDNF-217ENST00000533131 A6NJR5 290 aa9.04□□□□□ -0.96
BDNF-217ENST00000533131 RAB11FIP3O75154 756 aa9.04□□□□□ -0.96
BDNF-217ENST00000533131 CLIP1P30622 1438 aa9.03□□□□□ -0.96
BDNF-217ENST00000533131 CALR3Q96L12 384 aaKnown RBP9.03□□□□□ -0.96
BDNF-217ENST00000533131 TRIM66O15016 1216 aa9.02□□□□□ -0.97
BDNF-217ENST00000533131 TTLL12Q14166 644 aaPredicted RBP9.02□□□□□ -0.97
BDNF-217ENST00000533131 RUSC2Q8N2Y8 1516 aa9.02□□□□□ -0.97
BDNF-217ENST00000533131 PRDM2Q13029 1718 aa9.02□□□□□ -0.97
BDNF-217ENST00000533131 NEFMP07197 916 aa9.02□□□□□ -0.97
BDNF-217ENST00000533131 SPTY2D1Q68D10 685 aaPredicted RBP9.02□□□□□ -0.97
BDNF-217ENST00000533131 SMYD5Q6GMV2 418 aa9.01□□□□□ -0.97
BDNF-217ENST00000533131 TNIKQ9UKE5 1360 aa9.01□□□□□ -0.97
BDNF-217ENST00000533131 MKRN4PQ13434 485 aaPredicted RBP9.01□□□□□ -0.97
BDNF-217ENST00000533131 KCNH8Q96L42 1107 aa9.01□□□□□ -0.97
BDNF-217ENST00000533131 TMTC2Q8N394 836 aa9□□□□□ -0.97
BDNF-217ENST00000533131 WDR3Q9UNX4 943 aaKnown RBP eCLIP9□□□□□ -0.97
BDNF-217ENST00000533131 SH3BP5O60239 455 aa9□□□□□ -0.97
BDNF-217ENST00000533131 SREK1Q8WXA9 508 aaKnown RBP9□□□□□ -0.97
BDNF-217ENST00000533131 SUPT16HQ9Y5B9 1047 aaKnown RBP9□□□□□ -0.97
BDNF-217ENST00000533131 RIOK3O14730 519 aaKnown RBP8.99□□□□□ -0.97
BDNF-217ENST00000533131 CSB-PGBD3P0DP91 1061 aa8.99□□□□□ -0.97
BDNF-217ENST00000533131 MCM6Q14566 821 aa8.99□□□□□ -0.97
BDNF-217ENST00000533131 SENP3-EIF4A1A0A087X0R7 540 aa8.98□□□□□ -0.97
BDNF-217ENST00000533131 CANXP27824 592 aaKnown RBP8.98□□□□□ -0.97
BDNF-217ENST00000533131 PROM2Q8N271 834 aa8.98□□□□□ -0.97
BDNF-217ENST00000533131 KLHL42Q9P2K6 505 aa8.98□□□□□ -0.97
BDNF-217ENST00000533131 FAM193AP78312 1265 aa8.98□□□□□ -0.97
BDNF-217ENST00000533131 AMOTL2Q9Y2J4 779 aa8.98□□□□□ -0.97
BDNF-217ENST00000533131 SECISBP2LQ93073 1101 aaKnown RBP8.97□□□□□ -0.97
BDNF-217ENST00000533131 DDRGK1Q96HY6 314 aa8.97□□□□□ -0.97
BDNF-217ENST00000533131 SIN3AQ96ST3 1273 aa8.97□□□□□ -0.97
BDNF-217ENST00000533131 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.97□□□□□ -0.97
BDNF-217ENST00000533131 TESPA1A2RU30 521 aaPredicted RBP8.97□□□□□ -0.97
BDNF-217ENST00000533131 MAFGO15525 162 aa8.97□□□□□ -0.97
BDNF-217ENST00000533131 E2F4Q16254 413 aa8.97□□□□□ -0.97
BDNF-217ENST00000533131 KANK4Q5T7N3 995 aaPredicted RBP8.97□□□□□ -0.97
BDNF-217ENST00000533131 GIMAP6Q6P9H5 292 aa8.97□□□□□ -0.97
BDNF-217ENST00000533131 KAT6BQ8WYB5 2073 aa8.97□□□□□ -0.97
BDNF-217ENST00000533131 MCCP23508 829 aa8.97□□□□□ -0.97
BDNF-217ENST00000533131 PCMTD1Q96MG8 357 aaPredicted RBP8.97□□□□□ -0.97
BDNF-217ENST00000533131 ANP32CO43423 234 aa8.96□□□□□ -0.97
BDNF-217ENST00000533131 MAP4K4O95819 1239 aaPredicted RBP8.96□□□□□ -0.98
BDNF-217ENST00000533131 TCF3P15923 654 aa8.96□□□□□ -0.98
BDNF-217ENST00000533131 RALBP1Q15311 655 aa8.96□□□□□ -0.98
BDNF-217ENST00000533131 GRWD1Q9BQ67 446 aaKnown RBP eCLIP8.96□□□□□ -0.98
BDNF-217ENST00000533131 CUX2O14529 1486 aa8.96□□□□□ -0.98
BDNF-217ENST00000533131 CFTRP13569 1480 aa8.96□□□□□ -0.98
BDNF-217ENST00000533131 CDCA8Q53HL2 280 aa8.96□□□□□ -0.98
BDNF-217ENST00000533131 WDR62O43379 1518 aa8.95□□□□□ -0.98
BDNF-217ENST00000533131 TSR1Q2NL82 804 aaKnown RBP8.95□□□□□ -0.98
BDNF-217ENST00000533131 PLEKHG3A1L390 1219 aa8.95□□□□□ -0.98
BDNF-217ENST00000533131 DCAF8Q5TAQ9 597 aa8.95□□□□□ -0.98
BDNF-217ENST00000533131 PNMA2Q9UL42 364 aa8.95□□□□□ -0.98
BDNF-217ENST00000533131 GOLGA3Q08378 1498 aa8.94□□□□□ -0.98
BDNF-217ENST00000533131 SKIV2LQ15477 1246 aaKnown RBP8.94□□□□□ -0.98
BDNF-217ENST00000533131 GIPC2Q8TF65 315 aa8.94□□□□□ -0.98
BDNF-217ENST00000533131 RYDENQ9NUL5 291 aaKnown RBP8.94□□□□□ -0.98
BDNF-217ENST00000533131 WRNQ14191 1432 aaPredicted RBP eCLIP8.94□□□□□ -0.98
BDNF-217ENST00000533131 ARHGEF1Q92888 912 aaKnown RBP8.94□□□□□ -0.98
BDNF-217ENST00000533131 CADPSQ9ULU8 1353 aa8.94□□□□□ -0.98
BDNF-217ENST00000533131 GABBR1Q9UBS5 961 aa8.93□□□□□ -0.98
BDNF-217ENST00000533131 SND1Q7KZF4 910 aaKnown RBP eCLIP8.93□□□□□ -0.98
BDNF-217ENST00000533131 KIAA1522Q9P206 1035 aaPredicted RBP8.93□□□□□ -0.98
BDNF-217ENST00000533131 KIF4AO95239 1232 aa8.93□□□□□ -0.98
BDNF-217ENST00000533131 SIRT1Q96EB6 747 aa8.93□□□□□ -0.98
BDNF-217ENST00000533131 LMOD3Q0VAK6 560 aa8.92□□□□□ -0.98
BDNF-217ENST00000533131 TERF2IPQ9NYB0 399 aa8.92□□□□□ -0.98
BDNF-217ENST00000533131 BCL2L13Q9BXK5 485 aa8.91□□□□□ -0.98
BDNF-217ENST00000533131 CHMP4BQ9H444 224 aaKnown RBP8.91□□□□□ -0.98
BDNF-217ENST00000533131 HNRNPUQ00839 825 aaKnown RBP eCLIP8.91□□□□□ -0.98
BDNF-217ENST00000533131 FOXD4Q12950 439 aaPredicted RBP8.91□□□□□ -0.98
BDNF-217ENST00000533131 WDR78Q5VTH9 848 aa8.91□□□□□ -0.98
BDNF-217ENST00000533131 MORC4Q8TE76 937 aa8.91□□□□□ -0.98
BDNF-217ENST00000533131 URB2Q14146 1524 aaKnown RBP8.91□□□□□ -0.98
BDNF-217ENST00000533131 PLSCR2Q9NRY7 297 aa8.91□□□□□ -0.98
BDNF-217ENST00000533131 G3BP2Q9UN86 482 aaKnown RBP8.91□□□□□ -0.98
BDNF-217ENST00000533131 ERCC6Q03468 1493 aa8.9□□□□□ -0.98
BDNF-217ENST00000533131 hCG_2014768A0A024R1R8 64 aa8.9□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms