RNA–Protein interactions for RNA: ENST00000532245.5

CTNND1-230, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,655 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-230ENST00000532245 COG3Q96JB2 828 aa10.34□□□□□ -0.75
CTNND1-230ENST00000532245 HECW1Q76N89 1606 aa10.34□□□□□ -0.75
CTNND1-230ENST00000532245 OS9Q13438 667 aaPredicted RBP10.33□□□□□ -0.76
CTNND1-230ENST00000532245 PHF23Q9BUL5 403 aaPredicted RBP10.33□□□□□ -0.76
CTNND1-230ENST00000532245 PLEKHH2Q8IVE3 1493 aa10.33□□□□□ -0.76
CTNND1-230ENST00000532245 C9orf84Q5VXU9 1444 aa10.32□□□□□ -0.76
CTNND1-230ENST00000532245 PIP4K2BP78356 416 aa10.32□□□□□ -0.76
CTNND1-230ENST00000532245 NUTM2GQ5VZR2 741 aa10.32□□□□□ -0.76
CTNND1-230ENST00000532245 ANKLE2Q86XL3 938 aa10.32□□□□□ -0.76
CTNND1-230ENST00000532245 ARHGEF11O15085 1522 aa10.32□□□□□ -0.76
CTNND1-230ENST00000532245 ANP32AP39687 249 aaKnown RBP10.31□□□□□ -0.76
CTNND1-230ENST00000532245 SLC26A8Q96RN1 970 aa10.31□□□□□ -0.76
CTNND1-230ENST00000532245 DHX57Q6P158 1386 aaKnown RBP10.31□□□□□ -0.76
CTNND1-230ENST00000532245 GOLGA2Q08379 1002 aa10.31□□□□□ -0.76
CTNND1-230ENST00000532245 CUL7Q14999 1698 aa10.31□□□□□ -0.76
CTNND1-230ENST00000532245 ESCO1Q5FWF5 840 aa10.3□□□□□ -0.76
CTNND1-230ENST00000532245 EPRSP07814 1512 aaKnown RBP10.3□□□□□ -0.76
CTNND1-230ENST00000532245 CEBPAP49715 358 aaPredicted RBP10.3□□□□□ -0.76
CTNND1-230ENST00000532245 PANK3Q9H999 370 aa10.3□□□□□ -0.76
CTNND1-230ENST00000532245 EHBP1L1Q8N3D4 1523 aa10.3□□□□□ -0.76
CTNND1-230ENST00000532245 MSH5O43196 834 aa10.28□□□□□ -0.76
CTNND1-230ENST00000532245 SYTL4Q96C24 671 aaPredicted RBP10.28□□□□□ -0.76
CTNND1-230ENST00000532245 CENPJQ9HC77 1338 aaPredicted RBP10.28□□□□□ -0.76
CTNND1-230ENST00000532245 ADGRL1O94910 1474 aa10.28□□□□□ -0.76
CTNND1-230ENST00000532245 RALBP1Q15311 655 aa10.28□□□□□ -0.76
CTNND1-230ENST00000532245 CFAP70Q5T0N1 1121 aa10.28□□□□□ -0.76
CTNND1-230ENST00000532245 CCDC146Q8IYE0 955 aa10.28□□□□□ -0.76
CTNND1-230ENST00000532245 CABP2Q9NPB3 220 aa10.28□□□□□ -0.76
CTNND1-230ENST00000532245 NUTM2BA6NNL0 878 aaPredicted RBP10.27□□□□□ -0.77
CTNND1-230ENST00000532245 NUTM2EB1AL46 878 aaPredicted RBP10.27□□□□□ -0.77
CTNND1-230ENST00000532245 NUTM2AQ8IVF1 878 aaPredicted RBP10.27□□□□□ -0.77
CTNND1-230ENST00000532245 CGNL1Q0VF96 1302 aa10.27□□□□□ -0.77
CTNND1-230ENST00000532245 PMFBP1Q8TBY8 1022 aa10.26□□□□□ -0.77
CTNND1-230ENST00000532245 SLC52A1Q9NWF4 448 aa10.26□□□□□ -0.77
CTNND1-230ENST00000532245 USP47Q96K76 1375 aa10.26□□□□□ -0.77
CTNND1-230ENST00000532245 USP35Q9P2H5 1018 aa10.25□□□□□ -0.77
CTNND1-230ENST00000532245 SUPT16HQ9Y5B9 1047 aaKnown RBP10.25□□□□□ -0.77
CTNND1-230ENST00000532245 CALD1Q05682 793 aaKnown RBP10.25□□□□□ -0.77
CTNND1-230ENST00000532245 C1orf141Q5JVX7 400 aa10.25□□□□□ -0.77
CTNND1-230ENST00000532245 TMX4Q9H1E5 349 aaPredicted RBP10.24□□□□□ -0.77
CTNND1-230ENST00000532245 PRAM1Q96QH2 718 aa10.24□□□□□ -0.77
CTNND1-230ENST00000532245 KIF21AQ7Z4S6 1674 aa10.24□□□□□ -0.77
CTNND1-230ENST00000532245 MIA2Q96PC5 1412 aa10.24□□□□□ -0.77
CTNND1-230ENST00000532245 NLRP6P59044 892 aa10.24□□□□□ -0.77
CTNND1-230ENST00000532245 GTF2E1P29083 439 aaPredicted RBP10.23□□□□□ -0.77
CTNND1-230ENST00000532245 STK31Q9BXU1 1019 aa10.23□□□□□ -0.77
CTNND1-230ENST00000532245 MS4A1P11836 297 aa10.22□□□□□ -0.77
CTNND1-230ENST00000532245 FBXO31Q5XUX0 539 aaPredicted RBP10.22□□□□□ -0.77
CTNND1-230ENST00000532245 NLRP2Q9NX02 1062 aa10.22□□□□□ -0.77
CTNND1-230ENST00000532245 RRP7AQ9Y3A4 280 aaKnown RBP10.22□□□□□ -0.77
CTNND1-230ENST00000532245 GPRASP1Q5JY77 1395 aa10.22□□□□□ -0.77
CTNND1-230ENST00000532245 DENND4BO75064 1496 aaPredicted RBP10.22□□□□□ -0.77
CTNND1-230ENST00000532245 ABTB2Q8N961 1025 aa10.22□□□□□ -0.77
CTNND1-230ENST00000532245 CHMP4BQ9H444 224 aaKnown RBP10.22□□□□□ -0.77
CTNND1-230ENST00000532245 CHMP3Q9Y3E7 222 aa10.22□□□□□ -0.77
CTNND1-230ENST00000532245 ASXL2Q76L83 1435 aa10.22□□□□□ -0.77
CTNND1-230ENST00000532245 TAOK2Q9UL54 1235 aa10.22□□□□□ -0.77
CTNND1-230ENST00000532245 DAPK1P53355 1430 aa10.22□□□□□ -0.77
CTNND1-230ENST00000532245 FANCAO15360 1455 aa10.22□□□□□ -0.77
CTNND1-230ENST00000532245 RRBP1Q9P2E9 1410 aaKnown RBP10.21□□□□□ -0.77
CTNND1-230ENST00000532245 APBB1O00213 710 aa10.21□□□□□ -0.77
CTNND1-230ENST00000532245 STAC3Q96MF2 364 aa10.21□□□□□ -0.77
CTNND1-230ENST00000532245 STRN4Q9NRL3 753 aa10.21□□□□□ -0.78
CTNND1-230ENST00000532245 KIF14Q15058 1648 aa10.2□□□□□ -0.78
CTNND1-230ENST00000532245 GGNBP2Q9H3C7 697 aa10.2□□□□□ -0.78
CTNND1-230ENST00000532245 TIAM1Q13009 1591 aa10.2□□□□□ -0.78
CTNND1-230ENST00000532245 XPCQ01831 940 aaPredicted RBP10.2□□□□□ -0.78
CTNND1-230ENST00000532245 TEFQ10587 303 aa10.2□□□□□ -0.78
CTNND1-230ENST00000532245 SUPT6HQ7KZ85 1726 aaKnown RBP10.2□□□□□ -0.78
CTNND1-230ENST00000532245 PCF11O94913 1555 aaKnown RBP10.2□□□□□ -0.78
CTNND1-230ENST00000532245 AKNAQ7Z591 1439 aa10.2□□□□□ -0.78
CTNND1-230ENST00000532245 CASC1Q6TDU7 716 aa10.2□□□□□ -0.78
CTNND1-230ENST00000532245 CCDC141Q6ZP82 1450 aa10.19□□□□□ -0.78
CTNND1-230ENST00000532245 NLRP13Q86W25 1043 aa10.19□□□□□ -0.78
CTNND1-230ENST00000532245 RBM33Q96EV2 1170 aaKnown RBP10.19□□□□□ -0.78
CTNND1-230ENST00000532245 BIVM-ERCC5R4GMW8 1640 aa10.19□□□□□ -0.78
CTNND1-230ENST00000532245 LMOD3Q0VAK6 560 aa10.19□□□□□ -0.78
CTNND1-230ENST00000532245 KLHL34Q8N239 644 aa10.19□□□□□ -0.78
CTNND1-230ENST00000532245 TTC5Q8N0Z6 440 aa10.19□□□□□ -0.78
CTNND1-230ENST00000532245 NGEFQ8N5V2 710 aa10.19□□□□□ -0.78
CTNND1-230ENST00000532245 RAPGEF4Q8WZA2 1011 aa10.19□□□□□ -0.78
CTNND1-230ENST00000532245 SLC4A10Q6U841 1118 aa10.18□□□□□ -0.78
CTNND1-230ENST00000532245 RGS3P49796 1198 aa10.18□□□□□ -0.78
CTNND1-230ENST00000532245 ERBINQ96RT1 1412 aa10.18□□□□□ -0.78
CTNND1-230ENST00000532245 ELL2O00472 640 aaPredicted RBP10.18□□□□□ -0.78
CTNND1-230ENST00000532245 TAF7LQ5H9L4 462 aa10.18□□□□□ -0.78
CTNND1-230ENST00000532245 G3V3G9 751 aa10.17□□□□□ -0.78
CTNND1-230ENST00000532245 IPO8O15397 1037 aaKnown RBP10.17□□□□□ -0.78
CTNND1-230ENST00000532245 NBPF1Q3BBV0 1214 aa10.17□□□□□ -0.78
CTNND1-230ENST00000532245 DCAF8Q5TAQ9 597 aa10.17□□□□□ -0.78
CTNND1-230ENST00000532245 CHMP4AQ9BY43 222 aa10.17□□□□□ -0.78
CTNND1-230ENST00000532245 CAMSAP2Q08AD1 1489 aa10.17□□□□□ -0.78
CTNND1-230ENST00000532245 EIF4G3O43432 1585 aaKnown RBP10.17□□□□□ -0.78
CTNND1-230ENST00000532245 CCER2I3L3R5 266 aa10.16□□□□□ -0.78
CTNND1-230ENST00000532245 DIAPH1O60610 1272 aaKnown RBP10.16□□□□□ -0.78
CTNND1-230ENST00000532245 CDK19Q9BWU1 502 aa10.16□□□□□ -0.78
CTNND1-230ENST00000532245 ITPRIPQ8IWB1 547 aa10.16□□□□□ -0.78
CTNND1-230ENST00000532245 WDR62O43379 1518 aa10.16□□□□□ -0.78
CTNND1-230ENST00000532245 KCNJ4P48050 445 aa10.16□□□□□ -0.78
CTNND1-230ENST00000532245 SMC4Q9NTJ3 1288 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms