RNA–Protein interactions for RNA: ENST00000530820.5

CAPRIN1-209, Transcript of cell cycle associated protein 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CAPRIN1, Length 3,454 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-209ENST00000530820 HOMEZQ8IX15 550 aa11.18□□□□□ -0.62
CAPRIN1-209ENST00000530820 MCM4P33991 863 aa11.17□□□□□ -0.62
CAPRIN1-209ENST00000530820 CDCA8Q53HL2 280 aa11.17□□□□□ -0.62
CAPRIN1-209ENST00000530820 ZSCAN30Q86W11 494 aa11.17□□□□□ -0.62
CAPRIN1-209ENST00000530820 BANK1Q8NDB2 785 aa11.17□□□□□ -0.62
CAPRIN1-209ENST00000530820 NASPP49321 788 aaPredicted RBP11.16□□□□□ -0.62
CAPRIN1-209ENST00000530820 CDCA7LQ96GN5 454 aa11.16□□□□□ -0.62
CAPRIN1-209ENST00000530820 PRPF38AQ8NAV1 312 aaKnown RBP11.15□□□□□ -0.62
CAPRIN1-209ENST00000530820 RRP1P56182 461 aaKnown RBP11.15□□□□□ -0.62
CAPRIN1-209ENST00000530820 SRPK2P78362 688 aaKnown RBP11.15□□□□□ -0.62
CAPRIN1-209ENST00000530820 LETM1O95202 739 aaPredicted RBP11.15□□□□□ -0.63
CAPRIN1-209ENST00000530820 RCAN3Q9UKA8 241 aa11.15□□□□□ -0.63
CAPRIN1-209ENST00000530820 ZBED9Q6R2W3 1325 aa11.14□□□□□ -0.63
CAPRIN1-209ENST00000530820 NPHP1O15259 732 aa11.14□□□□□ -0.63
CAPRIN1-209ENST00000530820 KIF20AO95235 890 aa11.14□□□□□ -0.63
CAPRIN1-209ENST00000530820 FAM161AQ3B820 660 aa11.14□□□□□ -0.63
CAPRIN1-209ENST00000530820 EEA1Q15075 1411 aa11.14□□□□□ -0.63
CAPRIN1-209ENST00000530820 FOXD4L5Q5VV16 416 aaPredicted RBP11.13□□□□□ -0.63
CAPRIN1-209ENST00000530820 FOXD4L4Q8WXT5 416 aaPredicted RBP11.13□□□□□ -0.63
CAPRIN1-209ENST00000530820 UTP14CQ5TAP6 766 aaKnown RBP11.13□□□□□ -0.63
CAPRIN1-209ENST00000530820 PIK3R5Q8WYR1 880 aa11.12□□□□□ -0.63
CAPRIN1-209ENST00000530820 GYS2P54840 703 aa11.12□□□□□ -0.63
CAPRIN1-209ENST00000530820 DNAJC21Q5F1R6 531 aaKnown RBP11.11□□□□□ -0.63
CAPRIN1-209ENST00000530820 KANK4Q5T7N3 995 aaPredicted RBP11.11□□□□□ -0.63
CAPRIN1-209ENST00000530820 UPF2Q9HAU5 1272 aaKnown RBP11.11□□□□□ -0.63
CAPRIN1-209ENST00000530820 PDE6BP35913 854 aa11.11□□□□□ -0.63
CAPRIN1-209ENST00000530820 LMOD3Q0VAK6 560 aa11.1□□□□□ -0.63
CAPRIN1-209ENST00000530820 FOXD4L6Q3SYB3 417 aaPredicted RBP11.1□□□□□ -0.63
CAPRIN1-209ENST00000530820 FOXD4L3Q6VB84 417 aaPredicted RBP11.1□□□□□ -0.63
CAPRIN1-209ENST00000530820 ZNF592Q92610 1267 aa11.1□□□□□ -0.63
CAPRIN1-209ENST00000530820 GTPBP4Q9BZE4 634 aaKnown RBP11.1□□□□□ -0.63
CAPRIN1-209ENST00000530820 BCCIPQ9P287 314 aaKnown RBP eCLIP11.1□□□□□ -0.63
CAPRIN1-209ENST00000530820 CHRM1P11229 460 aaPredicted RBP11.1□□□□□ -0.63
CAPRIN1-209ENST00000530820 MS4A1P11836 297 aa11.1□□□□□ -0.63
CAPRIN1-209ENST00000530820 DNAJC2Q99543 621 aaKnown RBP11.1□□□□□ -0.63
CAPRIN1-209ENST00000530820 WDR97A6NE52 1622 aa11.09□□□□□ -0.63
CAPRIN1-209ENST00000530820 FSD2A1L4K1 749 aa11.09□□□□□ -0.63
CAPRIN1-209ENST00000530820 C8orf34Q49A92 452 aa11.09□□□□□ -0.63
CAPRIN1-209ENST00000530820 PDCL2Q8N4E4 241 aa11.09□□□□□ -0.63
CAPRIN1-209ENST00000530820 PRKRIP1Q9H875 184 aaPredicted RBP11.09□□□□□ -0.63
CAPRIN1-209ENST00000530820 HSPA5P11021 654 aaKnown RBP11.09□□□□□ -0.63
CAPRIN1-209ENST00000530820 IBSPP21815 317 aaPredicted RBP11.09□□□□□ -0.63
CAPRIN1-209ENST00000530820 SART3Q15020 963 aaKnown RBP11.09□□□□□ -0.63
CAPRIN1-209ENST00000530820 SKIDA1Q1XH10 827 aa11.08□□□□□ -0.64
CAPRIN1-209ENST00000530820 RSPH14Q9UHP6 348 aa11.08□□□□□ -0.64
CAPRIN1-209ENST00000530820 CAPN2P17655 700 aa11.08□□□□□ -0.64
CAPRIN1-209ENST00000530820 CLGNO14967 610 aa11.07□□□□□ -0.64
CAPRIN1-209ENST00000530820 GTF2A1P52655 376 aaPredicted RBP11.07□□□□□ -0.64
CAPRIN1-209ENST00000530820 MFAP1P55081 439 aaKnown RBP11.07□□□□□ -0.64
CAPRIN1-209ENST00000530820 DYNC1I1O14576 645 aa11.06□□□□□ -0.64
CAPRIN1-209ENST00000530820 C10orf67Q8IYJ2 551 aa11.06□□□□□ -0.64
CAPRIN1-209ENST00000530820 DRC1Q96MC2 740 aa11.06□□□□□ -0.64
CAPRIN1-209ENST00000530820 TIGD1Q96MW7 591 aa11.06□□□□□ -0.64
CAPRIN1-209ENST00000530820 E2F4Q16254 413 aa11.06□□□□□ -0.64
CAPRIN1-209ENST00000530820 TBC1D2Q9BYX2 928 aa11.06□□□□□ -0.64
CAPRIN1-209ENST00000530820 ZNF710Q8N1W2 664 aa11.05□□□□□ -0.64
CAPRIN1-209ENST00000530820 DDX49Q9Y6V7 483 aaKnown RBP11.05□□□□□ -0.64
CAPRIN1-209ENST00000530820 ST7Q9NRC1 585 aa11.05□□□□□ -0.64
CAPRIN1-209ENST00000530820 TONSLQ96HA7 1378 aa11.05□□□□□ -0.64
CAPRIN1-209ENST00000530820 NAA30Q147X3 362 aaPredicted RBP11.04□□□□□ -0.64
CAPRIN1-209ENST00000530820 NOL12Q9UGY1 213 aaKnown RBP eCLIP11.04□□□□□ -0.64
CAPRIN1-209ENST00000530820 CCDC9Q9Y3X0 531 aaKnown RBP11.04□□□□□ -0.64
CAPRIN1-209ENST00000530820 V9GYY5 206 aaPredicted RBP11.04□□□□□ -0.64
CAPRIN1-209ENST00000530820 GTF2F1P35269 517 aaKnown RBP eCLIP11.04□□□□□ -0.64
CAPRIN1-209ENST00000530820 CHAMP1Q96JM3 812 aa11.04□□□□□ -0.64
CAPRIN1-209ENST00000530820 CAVIN1Q6NZI2 390 aaKnown RBP11.03□□□□□ -0.64
CAPRIN1-209ENST00000530820 SASS6Q6UVJ0 657 aa11.03□□□□□ -0.64
CAPRIN1-209ENST00000530820 CNKSR2Q8WXI2 1034 aa11.03□□□□□ -0.64
CAPRIN1-209ENST00000530820 IRF6O14896 467 aa11.02□□□□□ -0.65
CAPRIN1-209ENST00000530820 GOLIM4O00461 696 aa11.02□□□□□ -0.65
CAPRIN1-209ENST00000530820 CT47A1Q5JQC4 288 aaPredicted RBP11.02□□□□□ -0.65
CAPRIN1-209ENST00000530820 PSEN1P49768 467 aa11.01□□□□□ -0.65
CAPRIN1-209ENST00000530820 MTERF4Q7Z6M4 381 aaKnown RBP11.01□□□□□ -0.65
CAPRIN1-209ENST00000530820 SEMA3FQ13275 785 aa11.01□□□□□ -0.65
CAPRIN1-209ENST00000530820 RALBP1Q15311 655 aa11.01□□□□□ -0.65
CAPRIN1-209ENST00000530820 RBM27Q9P2N5 1060 aaKnown RBP11.01□□□□□ -0.65
CAPRIN1-209ENST00000530820 PPP6R1Q9UPN7 881 aa11.01□□□□□ -0.65
CAPRIN1-209ENST00000530820 TTLL5Q6EMB2 1281 aa11□□□□□ -0.65
CAPRIN1-209ENST00000530820 CCDC173Q0VFZ6 552 aa11□□□□□ -0.65
CAPRIN1-209ENST00000530820 ANKRD65E5RJM6 399 aa11□□□□□ -0.65
CAPRIN1-209ENST00000530820 BCL2L12Q9HB09 334 aa11□□□□□ -0.65
CAPRIN1-209ENST00000530820 TRIM66O15016 1216 aa10.99□□□□□ -0.65
CAPRIN1-209ENST00000530820 HSP90B1P14625 803 aaKnown RBP10.99□□□□□ -0.65
CAPRIN1-209ENST00000530820 TTC12Q9H892 705 aaPredicted RBP10.99□□□□□ -0.65
CAPRIN1-209ENST00000530820 KIF3AQ9Y496 699 aa10.99□□□□□ -0.65
CAPRIN1-209ENST00000530820 GTF3C5Q9Y5Q8 519 aaPredicted RBP10.98□□□□□ -0.65
CAPRIN1-209ENST00000530820 CALR3Q96L12 384 aaKnown RBP10.97□□□□□ -0.65
CAPRIN1-209ENST00000530820 SRRTQ9BXP5 876 aaKnown RBP10.97□□□□□ -0.65
CAPRIN1-209ENST00000530820 RAB3GAP2Q9H2M9 1393 aa10.97□□□□□ -0.65
CAPRIN1-209ENST00000530820 NBPF1Q3BBV0 1214 aa10.97□□□□□ -0.65
CAPRIN1-209ENST00000530820 CCDC66A2RUB6 948 aa10.97□□□□□ -0.65
CAPRIN1-209ENST00000530820 HSP90AB1P08238 724 aaKnown RBP10.97□□□□□ -0.65
CAPRIN1-209ENST00000530820 PABPN1Q86U42 306 aaKnown RBP eCLIP10.96□□□□□ -0.65
CAPRIN1-209ENST00000530820 BIN2Q9UBW5 565 aaPredicted RBP10.96□□□□□ -0.65
CAPRIN1-209ENST00000530820 RNF217Q8TC41 542 aa10.96□□□□□ -0.66
CAPRIN1-209ENST00000530820 TAF3Q5VWG9 929 aa10.96□□□□□ -0.66
CAPRIN1-209ENST00000530820 POLR3GO15318 223 aaPredicted RBP10.95□□□□□ -0.66
CAPRIN1-209ENST00000530820 ECM2O94769 699 aaPredicted RBP10.95□□□□□ -0.66
CAPRIN1-209ENST00000530820 CHMP5Q9NZZ3 219 aa10.95□□□□□ -0.66
CAPRIN1-209ENST00000530820 MCTP1Q6DN14 999 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms