RNA–Protein interactions for RNA: ENST00000530730.1

CHKA-205, Transcript of choline kinase alpha, humanhuman

TSL 3

Gene CHKA, Length 582 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKA-205ENST00000530730 ZBED2Q9BTP6 218 aa15.14■□□□□ 0.01
CHKA-205ENST00000530730 RB1CC1Q8TDY2 1594 aa15.14■□□□□ 0.01
CHKA-205ENST00000530730 SPDYE16A6NNV3 312 aaPredicted RBP15.13■□□□□ 0.01
CHKA-205ENST00000530730 PPP1R3GB7ZBB8 358 aa15.1■□□□□ 0.01
CHKA-205ENST00000530730 BHMG1C9JSJ3 638 aaPredicted RBP15.08■□□□□ 0
CHKA-205ENST00000530730 STAC3Q96MF2 364 aa15.06■□□□□ 0
CHKA-205ENST00000530730 HCSTQ9UBK5 93 aa15.04■□□□□ -0
CHKA-205ENST00000530730 NACADO15069 1562 aa15.03■□□□□ -0
CHKA-205ENST00000530730 TSHZ2Q9NRE2 1034 aa15.03■□□□□ -0
CHKA-205ENST00000530730 DDX12PQ92771 950 aa15.02■□□□□ -0
CHKA-205ENST00000530730 C6orf132Q5T0Z8 1188 aa15.01□□□□□ -0.01
CHKA-205ENST00000530730 COL9A1P20849 921 aa15□□□□□ -0.01
CHKA-205ENST00000530730 ONECUT3O60422 494 aaPredicted RBP14.99□□□□□ -0.01
CHKA-205ENST00000530730 NBPF3Q9H094 633 aa14.99□□□□□ -0.01
CHKA-205ENST00000530730 EN1Q05925 392 aaPredicted RBP14.98□□□□□ -0.01
CHKA-205ENST00000530730 RABGEF1Q9UJ41 708 aa14.98□□□□□ -0.01
CHKA-205ENST00000530730 NBR1Q14596 966 aa14.95□□□□□ -0.02
CHKA-205ENST00000530730 MRPL50Q8N5N7 158 aaKnown RBP14.95□□□□□ -0.02
CHKA-205ENST00000530730 KCTD12Q96CX2 325 aaKnown RBP14.95□□□□□ -0.02
CHKA-205ENST00000530730 PROX2Q3B8N5 592 aa14.93□□□□□ -0.02
CHKA-205ENST00000530730 ARHGEF1Q92888 912 aaKnown RBP14.91□□□□□ -0.02
CHKA-205ENST00000530730 RBM33Q96EV2 1170 aaKnown RBP14.91□□□□□ -0.02
CHKA-205ENST00000530730 MAP3K7O43318 606 aa14.89□□□□□ -0.03
CHKA-205ENST00000530730 PLCB2Q00722 1185 aa14.89□□□□□ -0.03
CHKA-205ENST00000530730 LAPTM4BQ86VI4 370 aa14.89□□□□□ -0.03
CHKA-205ENST00000530730 GOLGA8CPA6NN73 597 aa14.87□□□□□ -0.03
CHKA-205ENST00000530730 TRIM6-TRIM34B2RNG4 842 aa14.87□□□□□ -0.03
CHKA-205ENST00000530730 THSD4Q6ZMP0 1018 aa14.87□□□□□ -0.03
CHKA-205ENST00000530730 CERKQ8TCT0 537 aa14.86□□□□□ -0.03
CHKA-205ENST00000530730 TSR1Q2NL82 804 aaKnown RBP14.85□□□□□ -0.03
CHKA-205ENST00000530730 WNT2BQ93097 391 aa14.85□□□□□ -0.03
CHKA-205ENST00000530730 KIAA1468Q9P260 1216 aa14.85□□□□□ -0.03
CHKA-205ENST00000530730 GRXCR2A6NFK2 248 aa14.84□□□□□ -0.03
CHKA-205ENST00000530730 OSBPP22059 807 aa14.84□□□□□ -0.03
CHKA-205ENST00000530730 KCNV2Q8TDN2 545 aa14.84□□□□□ -0.03
CHKA-205ENST00000530730 PRIM1P49642 420 aaKnown RBP14.82□□□□□ -0.04
CHKA-205ENST00000530730 P3H3Q8IVL6 736 aa14.81□□□□□ -0.04
CHKA-205ENST00000530730 MYO15BQ96JP2 1530 aa14.81□□□□□ -0.04
CHKA-205ENST00000530730 ANKK1Q8NFD2 765 aa14.78□□□□□ -0.04
CHKA-205ENST00000530730 PLA2G2EQ9NZK7 142 aa14.78□□□□□ -0.04
CHKA-205ENST00000530730 PTPN5P54829 565 aa14.76□□□□□ -0.05
CHKA-205ENST00000530730 FAM98CQ17RN3 349 aaKnown RBP14.76□□□□□ -0.05
CHKA-205ENST00000530730 PACS2Q86VP3 889 aa14.76□□□□□ -0.05
CHKA-205ENST00000530730 ZFRQ96KR1 1074 aaKnown RBP14.76□□□□□ -0.05
CHKA-205ENST00000530730 RBM27Q9P2N5 1060 aaKnown RBP14.76□□□□□ -0.05
CHKA-205ENST00000530730 TSKSQ9UJT2 592 aa14.76□□□□□ -0.05
CHKA-205ENST00000530730 PRSS12P56730 875 aa14.75□□□□□ -0.05
CHKA-205ENST00000530730 CDCA7LQ96GN5 454 aa14.75□□□□□ -0.05
CHKA-205ENST00000530730 SOWAHBA6NEL2 793 aa14.73□□□□□ -0.05
CHKA-205ENST00000530730 SEPT9Q9UHD8 586 aaPredicted RBP14.72□□□□□ -0.05
CHKA-205ENST00000530730 BICRAQ9NZM4 1560 aa14.72□□□□□ -0.05
CHKA-205ENST00000530730 UNC13AQ9UPW8 1703 aa14.72□□□□□ -0.05
CHKA-205ENST00000530730 CDHR5Q9HBB8 845 aa14.7□□□□□ -0.06
CHKA-205ENST00000530730 IFFO2Q5TF58 517 aa14.69□□□□□ -0.06
CHKA-205ENST00000530730 NYAP1Q6ZVC0 841 aa14.69□□□□□ -0.06
CHKA-205ENST00000530730 MLLT3P42568 568 aaPredicted RBP14.67□□□□□ -0.06
CHKA-205ENST00000530730 FAM198AQ9UFP1 575 aa14.67□□□□□ -0.06
CHKA-205ENST00000530730 NPDC1Q9NQX5 325 aaPredicted RBP14.66□□□□□ -0.06
CHKA-205ENST00000530730 NBPF26B4DH59 902 aa14.65□□□□□ -0.06
CHKA-205ENST00000530730 BCAMP50895 628 aa14.65□□□□□ -0.06
CHKA-205ENST00000530730 TTC13Q8NBP0 860 aa14.65□□□□□ -0.06
CHKA-205ENST00000530730 ZCCHC6Q5VYS8 1495 aaKnown RBP14.63□□□□□ -0.07
CHKA-205ENST00000530730 TATDN2Q93075 761 aa14.62□□□□□ -0.07
CHKA-205ENST00000530730 LRCH3Q96II8 777 aa14.62□□□□□ -0.07
CHKA-205ENST00000530730 CDKN2AIPQ9NXV6 580 aaPredicted RBP14.62□□□□□ -0.07
CHKA-205ENST00000530730 DCAF1Q9Y4B6 1507 aa14.6□□□□□ -0.07
CHKA-205ENST00000530730 TSR3Q9UJK0 312 aaKnown RBP14.59□□□□□ -0.07
CHKA-205ENST00000530730 PNMA3Q9UL41 463 aa14.58□□□□□ -0.08
CHKA-205ENST00000530730 C3orf80F5H4A9 247 aa14.57□□□□□ -0.08
CHKA-205ENST00000530730 ITGBL1O95965 494 aaPredicted RBP14.57□□□□□ -0.08
CHKA-205ENST00000530730 PADI6Q6TGC4 694 aa14.56□□□□□ -0.08
CHKA-205ENST00000530730 WBP1LQ9NX94 342 aa14.56□□□□□ -0.08
CHKA-205ENST00000530730 SMAPO00193 183 aa14.55□□□□□ -0.08
CHKA-205ENST00000530730 HAP1P54257 671 aaPredicted RBP14.55□□□□□ -0.08
CHKA-205ENST00000530730 PTGDRQ13258 359 aa14.55□□□□□ -0.08
CHKA-205ENST00000530730 SEMA3EO15041 775 aa14.54□□□□□ -0.08
CHKA-205ENST00000530730 NUDT18Q6ZVK8 323 aa14.54□□□□□ -0.08
CHKA-205ENST00000530730 HPS5Q9UPZ3 1129 aa14.53□□□□□ -0.08
CHKA-205ENST00000530730 SAMD7Q7Z3H4 446 aa14.52□□□□□ -0.09
CHKA-205ENST00000530730 TESPA1A2RU30 521 aaPredicted RBP14.51□□□□□ -0.09
CHKA-205ENST00000530730 SHROOM4Q9ULL8 1493 aa14.48□□□□□ -0.09
CHKA-205ENST00000530730 RGS20O76081 388 aa14.47□□□□□ -0.09
CHKA-205ENST00000530730 HDGFP51858 240 aaKnown RBP14.47□□□□□ -0.09
CHKA-205ENST00000530730 PPP4CP60510 307 aa14.47□□□□□ -0.09
CHKA-205ENST00000530730 EYA1Q99502 592 aa14.47□□□□□ -0.09
CHKA-205ENST00000530730 KDM2AQ9Y2K7 1162 aa14.47□□□□□ -0.09
CHKA-205ENST00000530730 SCRIBQ14160 1630 aa14.46□□□□□ -0.09
CHKA-205ENST00000530730 A0A0G2JS52 829 aa14.46□□□□□ -0.09
CHKA-205ENST00000530730 SMYD5Q6GMV2 418 aa14.46□□□□□ -0.09
CHKA-205ENST00000530730 NUTM2FA1L443 756 aa14.45□□□□□ -0.1
CHKA-205ENST00000530730 VSIG10Q8N0Z9 540 aa14.44□□□□□ -0.1
CHKA-205ENST00000530730 NECTIN2Q92692 538 aa14.44□□□□□ -0.1
CHKA-205ENST00000530730 FCHSD2O94868 740 aa14.43□□□□□ -0.1
CHKA-205ENST00000530730 KCNC4Q03721 635 aa14.41□□□□□ -0.1
CHKA-205ENST00000530730 CECR2Q9BXF3 1484 aa14.41□□□□□ -0.1
CHKA-205ENST00000530730 SLF2Q8IX21 1173 aa14.4□□□□□ -0.1
CHKA-205ENST00000530730 CC2D2AQ9P2K1 1620 aa14.4□□□□□ -0.1
CHKA-205ENST00000530730 ADGRG1Q9Y653 693 aa14.39□□□□□ -0.11
CHKA-205ENST00000530730 SWT1Q5T5J6 900 aaKnown RBP14.38□□□□□ -0.11
CHKA-205ENST00000530730 RBM46Q8TBY0 533 aaKnown RBP14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 303.3 ms