RNA–Protein interactions for RNA: ENST00000530275.3

MACF1-230, Transcript of microtubule-actin crosslinking factor 1, humanhuman

Gene MACF1, Length 5,767 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1-230ENST00000530275 EID1Q9Y6B2 187 aa16.09■□□□□ 0.17
MACF1-230ENST00000530275 FMN1Q68DA7 1419 aa16.09■□□□□ 0.17
MACF1-230ENST00000530275 IPO9Q96P70 1041 aaKnown RBP16.08■□□□□ 0.17
MACF1-230ENST00000530275 KIF3AQ9Y496 699 aa16.08■□□□□ 0.17
MACF1-230ENST00000530275 AMPHP49418 695 aa16.08■□□□□ 0.16
MACF1-230ENST00000530275 CEP89Q96ST8 783 aa16.08■□□□□ 0.16
MACF1-230ENST00000530275 MARCH6O60337 910 aa16.07■□□□□ 0.16
MACF1-230ENST00000530275 VPS53Q5VIR6 699 aa16.07■□□□□ 0.16
MACF1-230ENST00000530275 NGDNQ8NEJ9 315 aaKnown RBP16.07■□□□□ 0.16
MACF1-230ENST00000530275 CLUAP1Q96AJ1 413 aa16.06■□□□□ 0.16
MACF1-230ENST00000530275 PHLDB1Q86UU1 1377 aa16.06■□□□□ 0.16
MACF1-230ENST00000530275 FRAT2O75474 233 aaPredicted RBP16.06■□□□□ 0.16
MACF1-230ENST00000530275 SF3A1Q15459 793 aaKnown RBP16.05■□□□□ 0.16
MACF1-230ENST00000530275 KANK4Q5T7N3 995 aaPredicted RBP16.05■□□□□ 0.16
MACF1-230ENST00000530275 PDE3BQ13370 1112 aa16.05■□□□□ 0.16
MACF1-230ENST00000530275 DDX11L8A8MPP1 907 aa16.04■□□□□ 0.16
MACF1-230ENST00000530275 KIF3BO15066 747 aa16.04■□□□□ 0.16
MACF1-230ENST00000530275 H3BQV1 296 aa16.04■□□□□ 0.16
MACF1-230ENST00000530275 IFFO2Q5TF58 517 aa16.04■□□□□ 0.16
MACF1-230ENST00000530275 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.03■□□□□ 0.16
MACF1-230ENST00000530275 NUTM2DQ5VT03 806 aaPredicted RBP16.03■□□□□ 0.16
MACF1-230ENST00000530275 TPD52L1Q16890 204 aaPredicted RBP16.03■□□□□ 0.16
MACF1-230ENST00000530275 NLRP13Q86W25 1043 aa16.02■□□□□ 0.16
MACF1-230ENST00000530275 LTV1Q96GA3 475 aaPredicted RBP16.02■□□□□ 0.16
MACF1-230ENST00000530275 FOXD4L5Q5VV16 416 aaPredicted RBP16.02■□□□□ 0.16
MACF1-230ENST00000530275 FOXD4L4Q8WXT5 416 aaPredicted RBP16.02■□□□□ 0.16
MACF1-230ENST00000530275 KIF15Q9NS87 1388 aa16.02■□□□□ 0.16
MACF1-230ENST00000530275 GTF2E1P29083 439 aaPredicted RBP16.02■□□□□ 0.15
MACF1-230ENST00000530275 CHMP4CQ96CF2 233 aa16■□□□□ 0.15
MACF1-230ENST00000530275 PES1O00541 588 aaKnown RBP16■□□□□ 0.15
MACF1-230ENST00000530275 TPM2P07951 284 aa16■□□□□ 0.15
MACF1-230ENST00000530275 WASHC2CQ9Y4E1 1318 aa16■□□□□ 0.15
MACF1-230ENST00000530275 HNRNPMP52272 730 aaKnown RBP eCLIP15.99■□□□□ 0.15
MACF1-230ENST00000530275 FAM184AQ8NB25 1140 aa15.99■□□□□ 0.15
MACF1-230ENST00000530275 RILPL2Q969X0 211 aa15.99■□□□□ 0.15
MACF1-230ENST00000530275 TSR1Q2NL82 804 aaKnown RBP15.98■□□□□ 0.15
MACF1-230ENST00000530275 MYBBP1AQ9BQG0 1328 aaKnown RBP15.98■□□□□ 0.15
MACF1-230ENST00000530275 AKAP17AQ02040 695 aaKnown RBP15.97■□□□□ 0.15
MACF1-230ENST00000530275 PDS5BQ9NTI5 1447 aa15.97■□□□□ 0.15
MACF1-230ENST00000530275 ABCC8Q09428 1581 aa15.97■□□□□ 0.15
MACF1-230ENST00000530275 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.97■□□□□ 0.15
MACF1-230ENST00000530275 CCDC18Q5T9S5 1454 aa15.97■□□□□ 0.15
MACF1-230ENST00000530275 C1orf141Q5JVX7 400 aa15.96■□□□□ 0.15
MACF1-230ENST00000530275 L3MBTL2Q969R5 705 aa15.96■□□□□ 0.15
MACF1-230ENST00000530275 CENPQQ7L2Z9 268 aaPredicted RBP15.96■□□□□ 0.14
MACF1-230ENST00000530275 RRP7AQ9Y3A4 280 aaKnown RBP15.96■□□□□ 0.14
MACF1-230ENST00000530275 ATP6V1DQ9Y5K8 247 aa15.96■□□□□ 0.14
MACF1-230ENST00000530275 GOLGA6L19H0YKK7 550 aa15.95■□□□□ 0.14
MACF1-230ENST00000530275 SETQ01105 290 aaPredicted RBP15.95■□□□□ 0.14
MACF1-230ENST00000530275 TPM1P09493 284 aa15.95■□□□□ 0.14
MACF1-230ENST00000530275 UACAQ9BZF9 1416 aa15.95■□□□□ 0.14
MACF1-230ENST00000530275 CECR2Q9BXF3 1484 aa15.94■□□□□ 0.14
MACF1-230ENST00000530275 SYNE3Q6ZMZ3 975 aa15.94■□□□□ 0.14
MACF1-230ENST00000530275 RSPH4AQ5TD94 716 aa15.94■□□□□ 0.14
MACF1-230ENST00000530275 ANKRD45Q5TZF3 282 aa15.94■□□□□ 0.14
MACF1-230ENST00000530275 SKOR2Q2VWA4 1001 aaPredicted RBP15.93■□□□□ 0.14
MACF1-230ENST00000530275 TSHZ2Q9NRE2 1034 aa15.93■□□□□ 0.14
MACF1-230ENST00000530275 TRAK1Q9UPV9 953 aa15.93■□□□□ 0.14
MACF1-230ENST00000530275 AMOTL1Q8IY63 956 aa15.93■□□□□ 0.14
MACF1-230ENST00000530275 CCDC88BA6NC98 1476 aa15.93■□□□□ 0.14
MACF1-230ENST00000530275 COG3Q96JB2 828 aa15.92■□□□□ 0.14
MACF1-230ENST00000530275 NUTM2FA1L443 756 aa15.92■□□□□ 0.14
MACF1-230ENST00000530275 CCDC70Q6NSX1 233 aa15.92■□□□□ 0.14
MACF1-230ENST00000530275 LRRFIP1Q32MZ4 808 aaKnown RBP15.92■□□□□ 0.14
MACF1-230ENST00000530275 FAM161AQ3B820 660 aa15.92■□□□□ 0.14
MACF1-230ENST00000530275 NOL10Q9BSC4 688 aaKnown RBP15.92■□□□□ 0.14
MACF1-230ENST00000530275 ZKSCAN2Q63HK3 967 aa15.91■□□□□ 0.14
MACF1-230ENST00000530275 BECN2A8MW95 431 aa15.91■□□□□ 0.14
MACF1-230ENST00000530275 DIAPH3Q9NSV4 1193 aa15.91■□□□□ 0.14
MACF1-230ENST00000530275 TCEAL9Q9UHQ7 104 aa15.91■□□□□ 0.14
MACF1-230ENST00000530275 TRIM34Q9BYJ4 488 aa15.91■□□□□ 0.14
MACF1-230ENST00000530275 SMARCA2P51531 1590 aa15.9■□□□□ 0.14
MACF1-230ENST00000530275 E9PSI1 815 aa15.9■□□□□ 0.14
MACF1-230ENST00000530275 DDX49Q9Y6V7 483 aaKnown RBP15.9■□□□□ 0.14
MACF1-230ENST00000530275 CCDC144AA2RUR9 1427 aa15.9■□□□□ 0.14
MACF1-230ENST00000530275 ANO8Q9HCE9 1232 aaPredicted RBP15.9■□□□□ 0.14
MACF1-230ENST00000530275 CCAR2Q8N163 923 aaKnown RBP15.9■□□□□ 0.14
MACF1-230ENST00000530275 PANK3Q9H999 370 aa15.9■□□□□ 0.14
MACF1-230ENST00000530275 CGNL1Q0VF96 1302 aa15.9■□□□□ 0.14
MACF1-230ENST00000530275 TRIM29Q14134 588 aa15.9■□□□□ 0.14
MACF1-230ENST00000530275 MCTP1Q6DN14 999 aa15.9■□□□□ 0.14
MACF1-230ENST00000530275 TDRD9Q8NDG6 1382 aaKnown RBP15.89■□□□□ 0.13
MACF1-230ENST00000530275 TTC5Q8N0Z6 440 aa15.88■□□□□ 0.13
MACF1-230ENST00000530275 RUFY2Q8WXA3 655 aa15.88■□□□□ 0.13
MACF1-230ENST00000530275 EVA1CP58658 441 aa15.88■□□□□ 0.13
MACF1-230ENST00000530275 GPS2Q13227 327 aa15.88■□□□□ 0.13
MACF1-230ENST00000530275 CTDP1Q9Y5B0 961 aaPredicted RBP15.88■□□□□ 0.13
MACF1-230ENST00000530275 FHOD3Q2V2M9 1422 aa15.88■□□□□ 0.13
MACF1-230ENST00000530275 EVC2Q86UK5 1308 aa15.87■□□□□ 0.13
MACF1-230ENST00000530275 NEXNQ0ZGT2 675 aa15.87■□□□□ 0.13
MACF1-230ENST00000530275 ANO2Q9NQ90 1003 aa15.87■□□□□ 0.13
MACF1-230ENST00000530275 ELL2O00472 640 aaPredicted RBP15.87■□□□□ 0.13
MACF1-230ENST00000530275 CCDC47Q96A33 483 aaKnown RBP15.87■□□□□ 0.13
MACF1-230ENST00000530275 PCMTD1Q96MG8 357 aaPredicted RBP15.87■□□□□ 0.13
MACF1-230ENST00000530275 BCL2L13Q9BXK5 485 aa15.86■□□□□ 0.13
MACF1-230ENST00000530275 FOXD4L6Q3SYB3 417 aaPredicted RBP15.86■□□□□ 0.13
MACF1-230ENST00000530275 FOXD4L3Q6VB84 417 aaPredicted RBP15.86■□□□□ 0.13
MACF1-230ENST00000530275 RAPGEF2Q9Y4G8 1499 aa15.86■□□□□ 0.13
MACF1-230ENST00000530275 CPLX2Q6PUV4 134 aaKnown RBP15.86■□□□□ 0.13
MACF1-230ENST00000530275 RAD21O60216 631 aa15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms