RNA–Protein interactions for RNA: ENST00000528877.5

ITGB1-218, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 546 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-218ENST00000528877 PLEKHD1A6NEE1 506 aa11.55□□□□□ -0.56
ITGB1-218ENST00000528877 ILDR1Q86SU0 546 aaPredicted RBP11.55□□□□□ -0.56
ITGB1-218ENST00000528877 BMP2KQ9NSY1 1161 aaPredicted RBP11.55□□□□□ -0.56
ITGB1-218ENST00000528877 ADGRL1O94910 1474 aa11.55□□□□□ -0.56
ITGB1-218ENST00000528877 ZMYM4Q5VZL5 1548 aa11.55□□□□□ -0.56
ITGB1-218ENST00000528877 CLIP1P30622 1438 aa11.54□□□□□ -0.56
ITGB1-218ENST00000528877 TROQ12816 1431 aaPredicted RBP11.54□□□□□ -0.56
ITGB1-218ENST00000528877 FAM163AQ96GL9 167 aaPredicted RBP11.54□□□□□ -0.56
ITGB1-218ENST00000528877 FANCAO15360 1455 aa11.54□□□□□ -0.56
ITGB1-218ENST00000528877 RICTORQ6R327 1708 aa11.54□□□□□ -0.56
ITGB1-218ENST00000528877 ARHGEF40Q8TER5 1519 aa11.54□□□□□ -0.56
ITGB1-218ENST00000528877 KDM4FA0A1W2PPD8 638 aa11.53□□□□□ -0.56
ITGB1-218ENST00000528877 MYO5CQ9NQX4 1742 aa11.52□□□□□ -0.56
ITGB1-218ENST00000528877 TTLL13PA6NNM8 815 aa11.52□□□□□ -0.57
ITGB1-218ENST00000528877 SLC39A7Q92504 469 aa11.52□□□□□ -0.57
ITGB1-218ENST00000528877 PCDHB8Q9UN66 801 aa11.52□□□□□ -0.57
ITGB1-218ENST00000528877 PLCH2O75038 1416 aa11.52□□□□□ -0.57
ITGB1-218ENST00000528877 TMEM106CQ9BVX2 250 aa11.51□□□□□ -0.57
ITGB1-218ENST00000528877 TRPC6Q9Y210 931 aa11.51□□□□□ -0.57
ITGB1-218ENST00000528877 AKNAQ7Z591 1439 aa11.51□□□□□ -0.57
ITGB1-218ENST00000528877 DENND4BO75064 1496 aaPredicted RBP11.51□□□□□ -0.57
ITGB1-218ENST00000528877 C7P10643 843 aa11.5□□□□□ -0.57
ITGB1-218ENST00000528877 TAOK2Q9UL54 1235 aa11.5□□□□□ -0.57
ITGB1-218ENST00000528877 CDK11AQ9UQ88 783 aaPredicted RBP11.5□□□□□ -0.57
ITGB1-218ENST00000528877 ATN1P54259 1190 aaPredicted RBP11.49□□□□□ -0.57
ITGB1-218ENST00000528877 PDAP1Q13442 181 aaKnown RBP11.49□□□□□ -0.57
ITGB1-218ENST00000528877 SCUBE2Q9NQ36 999 aa11.49□□□□□ -0.57
ITGB1-218ENST00000528877 POGZQ7Z3K3 1410 aa11.49□□□□□ -0.57
ITGB1-218ENST00000528877 METRNQ9UJH8 293 aa11.48□□□□□ -0.57
ITGB1-218ENST00000528877 MAGI2Q86UL8 1455 aa11.48□□□□□ -0.57
ITGB1-218ENST00000528877 PREX2Q70Z35 1606 aa11.48□□□□□ -0.57
ITGB1-218ENST00000528877 KDM5CP41229 1560 aa11.46□□□□□ -0.57
ITGB1-218ENST00000528877 CEP162Q5TB80 1403 aa11.46□□□□□ -0.57
ITGB1-218ENST00000528877 RIOK3O14730 519 aaKnown RBP11.46□□□□□ -0.57
ITGB1-218ENST00000528877 ECM2O94769 699 aaPredicted RBP11.46□□□□□ -0.57
ITGB1-218ENST00000528877 IER5LQ5T953 404 aa11.46□□□□□ -0.57
ITGB1-218ENST00000528877 ZFYVE16Q7Z3T8 1539 aa11.45□□□□□ -0.58
ITGB1-218ENST00000528877 RAPGEF3O95398 923 aa11.45□□□□□ -0.58
ITGB1-218ENST00000528877 PSEN1P49768 467 aa11.45□□□□□ -0.58
ITGB1-218ENST00000528877 TRIM35Q9UPQ4 493 aa11.45□□□□□ -0.58
ITGB1-218ENST00000528877 ADAMTSL3P82987 1691 aa11.45□□□□□ -0.58
ITGB1-218ENST00000528877 CDAN1Q8IWY9 1227 aa11.44□□□□□ -0.58
ITGB1-218ENST00000528877 PELP1Q8IZL8 1130 aaKnown RBP11.44□□□□□ -0.58
ITGB1-218ENST00000528877 ABCC1P33527 1531 aa11.44□□□□□ -0.58
ITGB1-218ENST00000528877 ARHGAP5Q13017 1502 aa11.44□□□□□ -0.58
ITGB1-218ENST00000528877 ZNF518AQ6AHZ1 1483 aa11.44□□□□□ -0.58
ITGB1-218ENST00000528877 BCORL1Q5H9F3 1711 aa11.43□□□□□ -0.58
ITGB1-218ENST00000528877 CDC42BPBQ9Y5S2 1711 aa11.43□□□□□ -0.58
ITGB1-218ENST00000528877 PKD2Q13563 968 aa11.43□□□□□ -0.58
ITGB1-218ENST00000528877 VGFO15240 615 aaPredicted RBP11.42□□□□□ -0.58
ITGB1-218ENST00000528877 GOLGA2Q08379 1002 aa11.42□□□□□ -0.58
ITGB1-218ENST00000528877 CDC42BPAQ5VT25 1732 aa11.42□□□□□ -0.58
ITGB1-218ENST00000528877 SCAPERQ9BY12 1400 aa11.42□□□□□ -0.58
ITGB1-218ENST00000528877 EHBP1L1Q8N3D4 1523 aa11.41□□□□□ -0.58
ITGB1-218ENST00000528877 POTEJP0CG39 1038 aa11.41□□□□□ -0.58
ITGB1-218ENST00000528877 REREQ9P2R6 1566 aa11.41□□□□□ -0.58
ITGB1-218ENST00000528877 ITSN2Q9NZM3 1697 aa11.4□□□□□ -0.58
ITGB1-218ENST00000528877 EFCAB2Q5VUJ9 269 aa11.4□□□□□ -0.58
ITGB1-218ENST00000528877 ATP1B4Q9UN42 357 aaPredicted RBP11.4□□□□□ -0.58
ITGB1-218ENST00000528877 YEATS2Q9ULM3 1422 aa11.4□□□□□ -0.58
ITGB1-218ENST00000528877 HECW2Q9P2P5 1572 aa11.4□□□□□ -0.58
ITGB1-218ENST00000528877 SIGLEC1Q9BZZ2 1709 aa11.4□□□□□ -0.58
ITGB1-218ENST00000528877 MADDQ8WXG6 1647 aa11.38□□□□□ -0.59
ITGB1-218ENST00000528877 MLH3Q9UHC1 1453 aa11.38□□□□□ -0.59
ITGB1-218ENST00000528877 DIP2CQ9Y2E4 1556 aa11.37□□□□□ -0.59
ITGB1-218ENST00000528877 C9orf84Q5VXU9 1444 aa11.37□□□□□ -0.59
ITGB1-218ENST00000528877 ARHGEF12Q9NZN5 1544 aa11.37□□□□□ -0.59
ITGB1-218ENST00000528877 GPATCH8Q9UKJ3 1502 aaKnown RBP11.37□□□□□ -0.59
ITGB1-218ENST00000528877 SEC24BO95487 1268 aa11.37□□□□□ -0.59
ITGB1-218ENST00000528877 RNF25Q96BH1 459 aaPredicted RBP11.37□□□□□ -0.59
ITGB1-218ENST00000528877 PTPRMP28827 1452 aa11.37□□□□□ -0.59
ITGB1-218ENST00000528877 SAMD9LQ8IVG5 1584 aa11.37□□□□□ -0.59
ITGB1-218ENST00000528877 ATP10AO60312 1499 aa11.36□□□□□ -0.59
ITGB1-218ENST00000528877 TIAM1Q13009 1591 aa11.36□□□□□ -0.59
ITGB1-218ENST00000528877 VPS8Q8N3P4 1428 aa11.35□□□□□ -0.59
ITGB1-218ENST00000528877 ABCA6Q8N139 1617 aa11.35□□□□□ -0.59
ITGB1-218ENST00000528877 MKRN3Q13064 507 aaKnown RBP11.35□□□□□ -0.59
ITGB1-218ENST00000528877 SYCP2Q9BX26 1530 aa11.35□□□□□ -0.59
ITGB1-218ENST00000528877 KIAA1107Q9UPP5 1409 aa11.35□□□□□ -0.59
ITGB1-218ENST00000528877 PLEKHH2Q8IVE3 1493 aa11.34□□□□□ -0.59
ITGB1-218ENST00000528877 MTUS2Q5JR59 1369 aa11.34□□□□□ -0.59
ITGB1-218ENST00000528877 MAP3K1Q13233 1512 aa11.34□□□□□ -0.59
ITGB1-218ENST00000528877 INO80Q9ULG1 1556 aaPredicted RBP11.33□□□□□ -0.6
ITGB1-218ENST00000528877 AGLP35573 1532 aa11.33□□□□□ -0.6
ITGB1-218ENST00000528877 TRAPPC8Q9Y2L5 1435 aa11.33□□□□□ -0.6
ITGB1-218ENST00000528877 KIDINS220Q9ULH0 1771 aa11.32□□□□□ -0.6
ITGB1-218ENST00000528877 FER1L4A9Z1Z3 1794 aa11.31□□□□□ -0.6
ITGB1-218ENST00000528877 CCNB3Q8WWL7 1395 aa11.31□□□□□ -0.6
ITGB1-218ENST00000528877 RIMS1Q86UR5 1692 aaKnown RBP11.31□□□□□ -0.6
ITGB1-218ENST00000528877 PLCG2P16885 1265 aa11.31□□□□□ -0.6
ITGB1-218ENST00000528877 SUPT6HQ7KZ85 1726 aaKnown RBP11.31□□□□□ -0.6
ITGB1-218ENST00000528877 PLXNC1O60486 1568 aa11.3□□□□□ -0.6
ITGB1-218ENST00000528877 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.3□□□□□ -0.6
ITGB1-218ENST00000528877 ZFP91Q96JP5 570 aaPredicted RBP11.3□□□□□ -0.6
ITGB1-218ENST00000528877 RGL2O15211 777 aa11.29□□□□□ -0.6
ITGB1-218ENST00000528877 OCEL1Q9H607 264 aa11.29□□□□□ -0.6
ITGB1-218ENST00000528877 CABP2Q9NPB3 220 aa11.29□□□□□ -0.6
ITGB1-218ENST00000528877 NCOA2Q15596 1464 aa11.29□□□□□ -0.6
ITGB1-218ENST00000528877 ATP7AQ04656 1500 aa11.29□□□□□ -0.6
ITGB1-218ENST00000528877 LRRC9Q6ZRR7 1453 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 102.7 ms