RNA–Protein interactions for RNA: ENST00000527389.2

ATM-211, Transcript of ATM serine/threonine kinase, humanhuman

TSL 4

Gene ATM, Length 401 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-211ENST00000527389 RBM33Q96EV2 1170 aaKnown RBP13.32□□□□□ -0.28
ATM-211ENST00000527389 ARHGAP33O14559 1287 aa13.31□□□□□ -0.28
ATM-211ENST00000527389 TSR1Q2NL82 804 aaKnown RBP13.31□□□□□ -0.28
ATM-211ENST00000527389 RBM26Q5T8P6 1007 aaKnown RBP13.31□□□□□ -0.28
ATM-211ENST00000527389 LMOD2Q6P5Q4 547 aa13.28□□□□□ -0.28
ATM-211ENST00000527389 CDAN1Q8IWY9 1227 aa13.28□□□□□ -0.28
ATM-211ENST00000527389 KCNH8Q96L42 1107 aa13.28□□□□□ -0.28
ATM-211ENST00000527389 KCNK17Q96T54 332 aa13.28□□□□□ -0.28
ATM-211ENST00000527389 PPP1R3GB7ZBB8 358 aa13.27□□□□□ -0.29
ATM-211ENST00000527389 CDHR5Q9HBB8 845 aa13.27□□□□□ -0.29
ATM-211ENST00000527389 CERKQ8TCT0 537 aa13.26□□□□□ -0.29
ATM-211ENST00000527389 PSEN2P49810 448 aa13.25□□□□□ -0.29
ATM-211ENST00000527389 KRTAP3-3Q9BYR6 98 aa13.25□□□□□ -0.29
ATM-211ENST00000527389 KRTAP3-2Q9BYR7 98 aa13.25□□□□□ -0.29
ATM-211ENST00000527389 AXIN2Q9Y2T1 843 aa13.25□□□□□ -0.29
ATM-211ENST00000527389 COL9A1P20849 921 aa13.24□□□□□ -0.29
ATM-211ENST00000527389 NUTM2FA1L443 756 aa13.23□□□□□ -0.29
ATM-211ENST00000527389 PTGDRQ13258 359 aa13.23□□□□□ -0.29
ATM-211ENST00000527389 NPDC1Q9NQX5 325 aaPredicted RBP13.23□□□□□ -0.29
ATM-211ENST00000527389 PCDH10Q9P2E7 1040 aa13.23□□□□□ -0.29
ATM-211ENST00000527389 GPR37O15354 613 aa13.22□□□□□ -0.29
ATM-211ENST00000527389 DMRTA1Q5VZB9 504 aa13.22□□□□□ -0.29
ATM-211ENST00000527389 GPIHBP1Q8IV16 184 aa13.22□□□□□ -0.29
ATM-211ENST00000527389 SLC4A5Q9BY07 1137 aa13.22□□□□□ -0.29
ATM-211ENST00000527389 LSM11P83369 360 aaKnown RBP eCLIP13.21□□□□□ -0.29
ATM-211ENST00000527389 ZBED2Q9BTP6 218 aa13.2□□□□□ -0.3
ATM-211ENST00000527389 FCHSD2O94868 740 aa13.19□□□□□ -0.3
ATM-211ENST00000527389 RBM27Q9P2N5 1060 aaKnown RBP13.19□□□□□ -0.3
ATM-211ENST00000527389 TK2O00142 265 aa13.17□□□□□ -0.3
ATM-211ENST00000527389 HIC1Q14526 733 aa13.16□□□□□ -0.3
ATM-211ENST00000527389 ONECUT3O60422 494 aaPredicted RBP13.15□□□□□ -0.3
ATM-211ENST00000527389 PRSS12P56730 875 aa13.15□□□□□ -0.3
ATM-211ENST00000527389 CDCA7LQ96GN5 454 aa13.14□□□□□ -0.31
ATM-211ENST00000527389 TRIM6-TRIM34B2RNG4 842 aa13.13□□□□□ -0.31
ATM-211ENST00000527389 TTC13Q8NBP0 860 aa13.13□□□□□ -0.31
ATM-211ENST00000527389 VPS9D1Q9Y2B5 631 aa13.13□□□□□ -0.31
ATM-211ENST00000527389 GNPATO15228 680 aa13.12□□□□□ -0.31
ATM-211ENST00000527389 PROX2Q3B8N5 592 aa13.12□□□□□ -0.31
ATM-211ENST00000527389 ADGRD1Q6QNK2 874 aa13.12□□□□□ -0.31
ATM-211ENST00000527389 ZC3H15Q8WU90 426 aaKnown RBP13.11□□□□□ -0.31
ATM-211ENST00000527389 PADI6Q6TGC4 694 aa13.1□□□□□ -0.31
ATM-211ENST00000527389 TSKSQ9UJT2 592 aa13.1□□□□□ -0.31
ATM-211ENST00000527389 ANKRD13DQ6ZTN6 518 aa13.09□□□□□ -0.31
ATM-211ENST00000527389 RABGEF1Q9UJ41 708 aa13.09□□□□□ -0.31
ATM-211ENST00000527389 HRO43593 1189 aa13.08□□□□□ -0.32
ATM-211ENST00000527389 FAM198AQ9UFP1 575 aa13.08□□□□□ -0.32
ATM-211ENST00000527389 BHMG1C9JSJ3 638 aaPredicted RBP13.06□□□□□ -0.32
ATM-211ENST00000527389 ZMYND10O75800 440 aa13.06□□□□□ -0.32
ATM-211ENST00000527389 FECHP22830 423 aa13.04□□□□□ -0.32
ATM-211ENST00000527389 BARGINQ6ZT62 677 aa13.04□□□□□ -0.32
ATM-211ENST00000527389 PACS2Q86VP3 889 aa13.04□□□□□ -0.32
ATM-211ENST00000527389 KIAA1468Q9P260 1216 aa13.04□□□□□ -0.32
ATM-211ENST00000527389 NBPF26B4DH59 902 aa13.01□□□□□ -0.33
ATM-211ENST00000527389 MAP2K5Q13163 448 aa13.01□□□□□ -0.33
ATM-211ENST00000527389 NBPF3Q9H094 633 aa13.01□□□□□ -0.33
ATM-211ENST00000527389 ADGRG1Q9Y653 693 aa13□□□□□ -0.33
ATM-211ENST00000527389 TATDN2Q93075 761 aa12.99□□□□□ -0.33
ATM-211ENST00000527389 MINK1Q8N4C8 1332 aaPredicted RBP12.98□□□□□ -0.33
ATM-211ENST00000527389 C3orf80F5H4A9 247 aa12.98□□□□□ -0.33
ATM-211ENST00000527389 LAPTM4BQ86VI4 370 aa12.98□□□□□ -0.33
ATM-211ENST00000527389 PNMA3Q9UL41 463 aa12.97□□□□□ -0.33
ATM-211ENST00000527389 NUDT18Q6ZVK8 323 aa12.96□□□□□ -0.33
ATM-211ENST00000527389 EYA1Q99502 592 aa12.96□□□□□ -0.33
ATM-211ENST00000527389 IRF6O14896 467 aa12.95□□□□□ -0.34
ATM-211ENST00000527389 SPNS2Q8IVW8 549 aa12.95□□□□□ -0.34
ATM-211ENST00000527389 MRPL50Q8N5N7 158 aaKnown RBP12.95□□□□□ -0.34
ATM-211ENST00000527389 OATP04181 439 aa12.94□□□□□ -0.34
ATM-211ENST00000527389 FAM98CQ17RN3 349 aaKnown RBP12.94□□□□□ -0.34
ATM-211ENST00000527389 RBM46Q8TBY0 533 aaKnown RBP12.93□□□□□ -0.34
ATM-211ENST00000527389 SEPT9Q9UHD8 586 aaPredicted RBP12.93□□□□□ -0.34
ATM-211ENST00000527389 SMAPO00193 183 aa12.92□□□□□ -0.34
ATM-211ENST00000527389 FAM161AQ3B820 660 aa12.92□□□□□ -0.34
ATM-211ENST00000527389 METTL3Q86U44 580 aaKnown RBP12.92□□□□□ -0.34
ATM-211ENST00000527389 PXYLP1Q8TE99 480 aa12.92□□□□□ -0.34
ATM-211ENST00000527389 TPRNQ4KMQ1 711 aa12.91□□□□□ -0.34
ATM-211ENST00000527389 CCDC102AQ96A19 550 aa12.91□□□□□ -0.34
ATM-211ENST00000527389 STAC3Q96MF2 364 aa12.91□□□□□ -0.34
ATM-211ENST00000527389 KRI1Q8N9T8 703 aaKnown RBP12.89□□□□□ -0.35
ATM-211ENST00000527389 ZFRQ96KR1 1074 aaKnown RBP12.88□□□□□ -0.35
ATM-211ENST00000527389 MYT1LQ9UL68 1186 aa12.87□□□□□ -0.35
ATM-211ENST00000527389 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.86□□□□□ -0.35
ATM-211ENST00000527389 DNAJB2P25686 324 aa12.86□□□□□ -0.35
ATM-211ENST00000527389 SLC24A3Q9HC58 644 aa12.86□□□□□ -0.35
ATM-211ENST00000527389 RCCD1A6NED2 376 aa12.85□□□□□ -0.35
ATM-211ENST00000527389 AK7Q96M32 723 aa12.85□□□□□ -0.35
ATM-211ENST00000527389 PHOX2BQ99453 314 aa12.85□□□□□ -0.35
ATM-211ENST00000527389 GOLGA8CPA6NN73 597 aa12.83□□□□□ -0.36
ATM-211ENST00000527389 TMEM134Q9H6X4 195 aa12.83□□□□□ -0.36
ATM-211ENST00000527389 ANKK1Q8NFD2 765 aa12.81□□□□□ -0.36
ATM-211ENST00000527389 WNT2BQ93097 391 aa12.81□□□□□ -0.36
ATM-211ENST00000527389 MMRN1Q13201 1228 aa12.8□□□□□ -0.36
ATM-211ENST00000527389 AMHR2Q16671 573 aa12.8□□□□□ -0.36
ATM-211ENST00000527389 TRIM66O15016 1216 aa12.79□□□□□ -0.36
ATM-211ENST00000527389 SAMD7Q7Z3H4 446 aa12.79□□□□□ -0.36
ATM-211ENST00000527389 RNF166Q96A37 237 aaPredicted RBP12.79□□□□□ -0.36
ATM-211ENST00000527389 SOWAHBA6NEL2 793 aa12.78□□□□□ -0.36
ATM-211ENST00000527389 SWT1Q5T5J6 900 aaKnown RBP12.78□□□□□ -0.36
ATM-211ENST00000527389 THSD4Q6ZMP0 1018 aa12.77□□□□□ -0.37
ATM-211ENST00000527389 KCTD12Q96CX2 325 aaKnown RBP12.77□□□□□ -0.37
ATM-211ENST00000527389 LRCH3Q96II8 777 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms